Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nr2c2

Gene Name Gene ID Reads Annotation
nr2c2 ENSDARG00000042477 356 nuclear receptor subfamily 2, group C, member 2 [Source:ZFIN;Acc:ZDB-GENE-080403-8]










Genes with expression patterns similar to nr2c2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr2c2 ENSDARG00000042477 356 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear receptor subfamily 2, group C, member 2 [Source:ZFIN;Acc:ZDB-GENE-080403-8]
2. CT025910.1 CT025910.1 143 2.254 - - 0.760 - - 0.724 0.770 - -
3. Sep-03 Sep-03 1124 2.136 - - - 0.706 - 0.722 - - 0.708
4. ndufv3_1 ENSDARG00000090389 25 1.638 - 0.810 - - - - 0.828 - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
5. prpf31 ENSDARG00000095904 526 1.627 - - - - - 0.851 0.776 - - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
6. ccnh ENSDARG00000007657 745 1.547 0.770 - - - - 0.777 - - - cyclin H [Source:ZFIN;Acc:ZDB-GENE-050320-13]
7. dpysl5a ENSDARG00000011141 1827 1.545 - - - - - 0.798 - - 0.747 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
8. dixdc1a ENSDARG00000025302 716 1.543 - - - - - 0.793 0.750 - - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
9. wu:fb30e12 wu:fb30e12 1254 1.538 - - - - - 0.775 0.763 - -
10. PMFBP1 ENSDARG00000101917 292 1.525 - - 0.757 - - 0.768 - - - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
11. ndrg4 ENSDARG00000103937 1234 1.52 - - - - - 0.811 - - 0.709 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
12. ift57 ENSDARG00000021022 288 1.517 0.709 - - - - 0.808 - - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
13. fam110b ENSDARG00000088073 420 1.516 - 0.773 - - - 0.743 - - - family with sequence similarity 110, member B [Source:ZFIN;Acc:ZDB-GENE-050626-70]
14. gap43 ENSDARG00000099744 4114 1.515 - - - - - 0.762 - - 0.753 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
15. TUSC5_1 TUSC5_1 320 1.508 - - - - - 0.803 0.705 - -
16. hcn4l ENSDARG00000074419 46 1.507 0.736 0.771 - - - - - - - hyperpolarization activated cyclic nucleotide-gated potassium channel 4l [Source:ZFIN;Acc:ZDB-GENE-110411-3]
17. sbf2 ENSDARG00000059460 311 1.502 - - 0.719 - - 0.783 - - - SET binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-030911-10]
18. rps8b ENSDARG00000057368 68 1.492 - 0.782 - - - - 0.710 - - ribosomal protein S8b [Source:ZFIN;Acc:ZDB-GENE-050522-202]
19. hmp19 2554 1.484 - - - - - 0.776 - - 0.708 HMP19 protein
20. nr2f1a ENSDARG00000052695 5037 1.482 0.712 - - - - 0.770 - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
21. NPTXR NPTXR 241 1.472 0.768 0.704 - - - - - - -
22. celf3a ENSDARG00000034668 2432 1.471 - - - - - 0.714 - - 0.757 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
23. bcl11ab ENSDARG00000063153 3032 1.461 - - - - - 0.727 - - 0.734 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
24. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 1.46 - - - - - 0.708 0.752 - - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
25. C20H8orf82 C20H8orf82 91 1.455 - 0.744 0.711 - - - - - -
26. zgc:65895 ENSDARG00000034086 1258 1.452 - - 0.706 - - 0.746 - - - zgc:65895 [Source:ZFIN;Acc:ZDB-GENE-040426-1466]
27. tuba1c ENSDARG00000055216 8384 1.452 - - - - - 0.706 - - 0.746 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
28. METTL4 ENSDARG00000088999 160 1.452 - - 0.717 - - - 0.735 - - methyltransferase like 4 [Source:ZFIN;Acc:ZDB-GENE-130129-2]
29. zgc:113443 359 1.449 0.705 - 0.744 - - - - - - zgc:113443, transcript variant X3
30. rap2ip rap2ip 681 1.438 - - - - - 0.703 - - 0.735
31. aplp1 ENSDARG00000098368 2317 1.431 - - - - - 0.707 - - 0.724 amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
32. uvrag ENSDARG00000023815 424 1.425 - - - - - 0.724 0.701 - - UV radiation resistance associated gene [Source:ZFIN;Acc:ZDB-GENE-040426-924]
33. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.424 - - - - - 0.709 - - 0.715 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
34. OSBPL3 OSBPL3 145 0.928 - 0.928 - - - - - - -
35. shpk ENSDARG00000002355 84 0.918 - 0.918 - - - - - - - sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]
36. C17H14orf159 128 0.897 - 0.897 - - - - - - - c17h14orf159 homolog (H. sapiens)
37. ZNF337_6 ZNF337_6 898 0.893 - 0.893 - - - - - - -
38. rad54b ENSDARG00000092134 231 0.888 - 0.888 - - - - - - - RAD54 homolog B [Source:ZFIN;Acc:ZDB-GENE-060810-50]
39. mn1b ENSDARG00000079248 882 0.885 - - - - - 0.885 - - - meningioma 1b [Source:ZFIN;Acc:ZDB-GENE-080917-23]
40. C8H1orf228 C8H1orf228 72 0.879 0.879 - - - - - - - -
41. CABZ01072954.1 CABZ01072954.1 2330 0.875 - - - - - 0.875 - - -
42. hbl1 ENSDARG00000068221 116 0.873 - 0.873 - - - - - - - hexose-binding lectin 1 [Source:ZFIN;Acc:ZDB-GENE-070912-285]
43. AUTS2 AUTS2 504 0.87 - - - - - 0.870 - - -
44. BX004890.2 BX004890.2 84 0.867 - - - - - - 0.867 - -
45. si:dkey-177p2.15p si:dkey-177p2.15p 20 0.867 - 0.867 - - - - - - -
46. pcif1 ENSDARG00000099084 2851 0.864 - - - - - 0.864 - - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
47. fgf12a ENSDARG00000027957 143 0.863 - - - - - - 0.863 - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
48. tmem178 ENSDARG00000020758 77 0.858 - - - - - 0.858 - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
49. fgf1a ENSDARG00000017542, ENSDARG00000110811, ENSDARG00000114842 227 0.856 - 0.856 - - - - - - - fibroblast growth factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1729]
50. dph3 ENSDARG00000043360 117 0.854 - 0.854 - - - - - - - diphthamide biosynthesis 3 [Source:ZFIN;Acc:ZDB-GENE-050522-545]
51. drg1 ENSDARG00000039345 7545 0.853 - - - - - 0.853 - - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
52. RASGRF2 RASGRF2 644 0.852 - - - - - 0.852 - - -
53. eml1 ENSDARG00000042840 569 0.852 - - - - - 0.852 - - - echinoderm microtubule associated protein like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-156]
54. kiaa1549la ENSDARG00000062477 143 0.849 - - - - - 0.849 - - - KIAA1549-like a [Source:ZFIN;Acc:ZDB-GENE-061207-55]
55. SHC3 ENSDARG00000098909 332 0.848 - - - - - 0.848 - - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
56. syt3 ENSDARG00000075830 430 0.845 - 0.845 - - - - - - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
57. MED9 ENSDARG00000096631 755 0.844 - 0.844 - - - - - - - mediator complex subunit 9 [Source:HGNC Symbol;Acc:HGNC:25487]
58. chmp6b ENSDARG00000102024 37 0.842 - 0.842 - - - - - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
59. tekt3 ENSDARG00000045038 9 0.842 - 0.842 - - - - - - - tektin 3 [Source:ZFIN;Acc:ZDB-GENE-080130-2]
60. her8a ENSDARG00000016363 996 0.842 - - - - - 0.842 - - - hairy-related 8a [Source:ZFIN;Acc:ZDB-GENE-030131-2376]
61. klf9 ENSDARG00000068194 5 0.842 - 0.842 - - - - - - - Kruppel-like factor 9 [Source:ZFIN;Acc:ZDB-GENE-060526-244]
62. mfsd2aa ENSDARG00000030630 66 0.842 - 0.842 - - - - - - - major facilitator superfamily domain containing 2aa [Source:ZFIN;Acc:ZDB-GENE-041114-166]
63. zgc:110224 ENSDARG00000032263 147 0.842 - 0.842 - - - - - - - zgc:110224 [Source:ZFIN;Acc:ZDB-GENE-050417-120]
64. nf2b ENSDARG00000025567 1441 0.838 - - - - - 0.838 - - - neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
65. ccm2l ENSDARG00000063089 100 0.838 - 0.838 - - - - - - - CCM2 like scaffold protein [Source:ZFIN;Acc:ZDB-GENE-090313-248]
66. FDXACB1 ENSDARG00000095750 98 0.837 - 0.837 - - - - - - - ferredoxin-fold anticodon binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8403]
67. CASS4 ENSDARG00000006775 760 0.837 - - - - - 0.837 - - - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
68. gpatch2 1221 0.836 - - - - - 0.836 - - - G patch domain containing 2, transcript variant X1
69. srpk1b ENSDARG00000031560 2079 0.835 - - - - - 0.835 - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
70. zhx3 ENSDARG00000019774 463 0.835 - - - - - 0.835 - - - zinc fingers and homeoboxes 3 [Source:ZFIN;Acc:ZDB-GENE-031107-1]
71. MAP6 MAP6 643 0.835 - - - - - 0.835 - - -
72. zbtb34 ENSDARG00000013492 32 0.833 - 0.833 - - - - - - - zinc finger and BTB domain containing 34 [Source:ZFIN;Acc:ZDB-GENE-050624-2]
73. fam136a ENSDARG00000098401 50 0.833 - 0.833 - - - - - - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
74. tnni2a.2 ENSDARG00000005841 483 0.832 - - - - - 0.832 - - - troponin I type 2a (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-970]
75. mpzl1l ENSDARG00000059048 571 0.831 - - - 0.831 - - - - - myelin protein zero-like 1 like [Source:ZFIN;Acc:ZDB-GENE-050417-455]
76. pnoca ENSDARG00000025024 467 0.831 - - - - - 0.831 - - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
77. fgf3 ENSDARG00000101540 75 0.828 - - - - - - 0.828 - - fibroblast growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-178]
78. taf5l ENSDARG00000025808 556 0.828 - - - - - - 0.828 - - TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5987]
79. ptprz1b ENSDARG00000020871 435 0.828 - - - - - - 0.828 - - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
80. grap2a ENSDARG00000006468 70 0.828 - 0.828 - - - - - - - GRB2 related adaptor protein 2a [Source:ZFIN;Acc:ZDB-GENE-050417-275]
81. kif3b ENSDARG00000101120 1158 0.827 - - - - - 0.827 - - - kinesin family member 3B [Source:ZFIN;Acc:ZDB-GENE-050119-3]
82. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 0.827 - - - - - 0.827 - - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
83. SNX19 SNX19 350 0.826 - - - - - 0.826 - - -
84. ttll7 ENSDARG00000062973 519 0.825 - - - - - 0.825 - - - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
85. minal minal 383 0.822 - 0.822 - - - - - - -
86. si:ch211-266k8.3 si:ch211-266k8.3 250 0.822 0.822 - - - - - - - -
87. sh3bp5lb 1090 0.822 - - - - - 0.822 - - - SH3-binding domain protein 5-like, b
88. jazf1a ENSDARG00000102551 767 0.821 - - - - - 0.821 - - - JAZF zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-060503-492]
89. prune2 ENSDARG00000059423, ENSDARG00000116519 646 0.821 - - - - - 0.821 - - - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
90. zgc:112496 ENSDARG00000004274 1258 0.821 - - - - - - - 0.821 - zgc:112496 [Source:ZFIN;Acc:ZDB-GENE-050320-25]
91. bub1ba ENSDARG00000078825 330 0.82 - - - - - - 0.820 - - BUB1 mitotic checkpoint serine/threonine kinase Ba [Source:ZFIN;Acc:ZDB-GENE-041014-120]
92. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 0.82 - - - - - 0.820 - - - putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
93. alpl ENSDARG00000015546 334 0.819 - 0.819 - - - - - - - alkaline phosphatase, liver/bone/kidney [Source:ZFIN;Acc:ZDB-GENE-040420-1]
94. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 0.819 - - - - - 0.819 - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
95. cd99l2 ENSDARG00000056722 5036 0.819 - - - - - 0.819 - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
96. SALL2 ENSDARG00000075116 527 0.819 - - - - - 0.819 - - - spalt-like transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030829-32]
97. rims1a ENSDARG00000074680 143 0.818 - - - - - 0.818 - - - regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
98. si:dkey-81p22.11 ENSDARG00000093797 68 0.817 - - 0.817 - - - - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
99. lbx1b ENSDARG00000018611 399 0.817 - - - - - - 0.817 - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
100. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 0.817 - - - - - 0.817 - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]

There are 855 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA