Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nr1i2

Gene Name Gene ID Reads Annotation
nr1i2 ENSDARG00000029766 458 nuclear receptor subfamily 1, group I, member 2 [Source:ZFIN;Acc:ZDB-GENE-030903-3]










Genes with expression patterns similar to nr1i2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr1i2 ENSDARG00000029766 458 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear receptor subfamily 1, group I, member 2 [Source:ZFIN;Acc:ZDB-GENE-030903-3]
2. si:dkey-23c22.4 si:dkey-23c22.4 556 1.689 - - - - - 0.863 - 0.826 -
3. phospho1 ENSDARG00000008403 729 1.674 - - - - - - 0.753 0.921 - phosphatase, orphan 1 [Source:ZFIN;Acc:ZDB-GENE-040801-198]
4. dnah9l ENSDARG00000062630 268 1.652 0.818 - - - - - - 0.834 - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
5. CABZ01038494.1 ENSDARG00000088258 908 1.607 - - - - - 0.734 0.873 - - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
6. acsm3 ENSDARG00000004880 165 1.604 0.844 - - - - - 0.760 - - acyl-CoA synthetase medium chain family member 3 [Source:ZFIN;Acc:ZDB-GENE-080220-22]
7. bmp2b ENSDARG00000041430, ENSDARG00000115191 894 1.603 - 0.848 - - - 0.755 - - - bone morphogenetic protein 2b [Source:ZFIN;Acc:ZDB-GENE-980526-474]
8. CNNM2 CNNM2 225 1.597 0.833 0.764 - - - - - - -
9. rab25a ENSDARG00000058800 451 1.596 - - 0.769 - - - - 0.827 - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
10. ripply1 ENSDARG00000054103 367 1.593 0.807 0.786 - - - - - - - ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]
11. OCEL1 OCEL1 27 1.592 - 0.742 - - - - 0.850 - -
12. cyb5r2 ENSDARG00000051925 304 1.59 0.879 - - - - - - 0.711 - cytochrome b5 reductase 2 [Source:ZFIN;Acc:ZDB-GENE-060825-83]
13. tmem79b ENSDARG00000076861 154 1.588 - 0.720 - - - - 0.868 - - transmembrane protein 79b [Source:ZFIN;Acc:ZDB-GENE-120807-1]
14. cx28.8 ENSDARG00000071042 62 1.583 - 0.742 - - - - - 0.841 - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
15. ppa1a ENSDARG00000099933 31 1.576 - 0.726 - - - - 0.850 - - pyrophosphatase (inorganic) 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1695]
16. zgc:162180 zgc:162180 31 1.575 - - 0.725 - - - 0.850 - -
17. CU234171.2 CU234171.2 86 1.559 - - - - - - 0.718 0.841 -
18. kita ENSDARG00000043317 1091 1.545 - 0.718 - - - - - 0.827 - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-980526-464]
19. TMEM216 ENSDARG00000091576 357 1.539 0.762 - - - - - 0.777 - - transmembrane protein 216 [Source:HGNC Symbol;Acc:HGNC:25018]
20. zgc:112980 ENSDARG00000037739, ENSDARG00000114118 552 1.536 - - - - - 0.747 - 0.789 - zgc:112980 [Source:ZFIN;Acc:ZDB-GENE-050306-1]
21. prkx ENSDARG00000060716 530 1.535 0.764 - - - - - - 0.771 - protein kinase X-linked [Source:ZFIN;Acc:ZDB-GENE-090313-408]
22. atp6v0a2b ENSDARG00000035565, ENSDARG00000113695 785 1.524 - 0.758 - - - - - 0.766 - ATPase H+ transporting V0 subunit a2b [Source:ZFIN;Acc:ZDB-GENE-060526-4]
23. spryd7b ENSDARG00000069485, ENSDARG00000114214, ENSDARG00000115747 488 1.518 - 0.730 - - - 0.788 - - - SPRY domain containing 7b [Source:ZFIN;Acc:ZDB-GENE-040426-1634]
24. rhbdl2 ENSDARG00000069833, ENSDARG00000109477 891 1.516 - - 0.762 - - - - 0.754 - rhomboid, veinlet-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-732]
25. ptpn13 ENSDARG00000103699 2866 1.514 - - - - - 0.764 0.750 - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
26. arhgap28 ENSDARG00000101350 1099 1.507 - - - - - 0.779 - 0.728 - Rho GTPase activating protein 28 [Source:ZFIN;Acc:ZDB-GENE-041114-147]
27. GFOD1 ENSDARG00000061363 67 1.495 - 0.726 - - - - 0.769 - - glucose-fructose oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21096]
28. commd1 ENSDARG00000031203 340 1.488 - 0.780 - - - 0.708 - - - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
29. CABZ01039859.1 ENSDARG00000076361 540 1.486 - 0.707 - - - - - 0.779 - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
30. dcakd ENSDARG00000061638 120 1.484 - 0.715 - - - - 0.769 - - dephospho-CoA kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-226]
31. si:dkey-30c15.13 ENSDARG00000069524, ENSDARG00000114258 403 1.483 - - - - - 0.704 - 0.779 - si:dkey-30c15.13 [Source:ZFIN;Acc:ZDB-GENE-060503-73]
32. lypd6b ENSDARG00000077643 650 1.482 0.768 - - - - - 0.714 - - LY6/PLAUR domain containing 6B [Source:ZFIN;Acc:ZDB-GENE-050522-38]
33. creb3l3l ENSDARG00000020926, ENSDARG00000116217 1458 1.48 - 0.737 - - - 0.743 - - - cAMP responsive element binding protein 3-like 3 like [Source:ZFIN;Acc:ZDB-GENE-040426-2942]
34. gata3 ENSDARG00000016526 1857 1.448 - - - - - 0.733 0.715 - - GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]
35. CDH24 CDH24 325 1.447 - - 0.710 - - - 0.737 - -
36. tango6 ENSDARG00000034001 203 0.942 0.942 - - - - - - - - transport and golgi organization 6 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050419-237]
37. zgc:152938 ENSDARG00000102586 97 0.931 0.931 - - - - - - - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
38. stk16 ENSDARG00000037777 255 0.918 - - - - - - - 0.918 - serine/threonine kinase 16 [Source:ZFIN;Acc:ZDB-GENE-050417-102]
39. C13H4orf32 C13H4orf32 174 0.918 0.918 - - - - - - - -
40. dre-mir-429b ENSDARG00000082968 212 0.917 - - - - - - 0.917 - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
41. mettl7a ENSDARG00000056726, ENSDARG00000060889, ENSDARG00000111162 18 0.914 0.914 - - - - - - - - methyltransferase like 7A [Source:ZFIN;Acc:ZDB-GENE-061027-239]
42. fam89b ENSDARG00000069106 294 0.912 0.912 - - - - - - - - family with sequence similarity 89, member B [Source:ZFIN;Acc:ZDB-GENE-091204-269]
43. si:rp71-80o10.4 ENSDARG00000094316 279 0.912 0.912 - - - - - - - - si:rp71-80o10.4 [Source:ZFIN;Acc:ZDB-GENE-090313-413]
44. lrrc31 ENSDARG00000057392 61 0.912 0.912 - - - - - - - - leucine rich repeat containing 31 [Source:ZFIN;Acc:ZDB-GENE-091204-286]
45. tmem144a ENSDARG00000037409, ENSDARG00000110998, ENSDARG00000112588, ENSDARG00000116960 64 0.912 0.912 - - - - - - - - transmembrane protein 144a [Source:ZFIN;Acc:ZDB-GENE-040822-12]
46. crp1 ENSDARG00000071454 31 0.912 0.912 - - - - - - - - C-reactive protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-314]
47. gb:bc139653 gb:bc139653 239 0.906 0.906 - - - - - - - -
48. TJP1 TJP1 153 0.897 0.897 - - - - - - - -
49. si:dkey-250k15.4 ENSDARG00000092169 19 0.896 0.896 - - - - - - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
50. gnsa ENSDARG00000023766 545 0.894 0.894 - - - - - - - - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
51. CABZ01087549.1 CABZ01087549.1 108 0.892 - - - - - - - 0.892 -
52. si:ch211-15j21.2 si:ch211-15j21.2 13 0.889 0.889 - - - - - - - -
53. pvalb8 ENSDARG00000037790 1362 0.888 - 0.888 - - - - - - - parvalbumin 8 [Source:ZFIN;Acc:ZDB-GENE-030805-3]
54. crlf1a ENSDARG00000024365 222 0.888 0.888 - - - - - - - - cytokine receptor-like factor 1a [Source:ZFIN;Acc:ZDB-GENE-040718-397]
55. pus7l_1 ENSDARG00000069780 49 0.887 - - - - - - 0.887 - - pseudouridylate synthase 7, like [Source:ZFIN;Acc:ZDB-GENE-050419-188]
56. CCDC30 ENSDARG00000056961 178 0.886 0.886 - - - - - - - - coiled-coil domain containing 30 [Source:ZFIN;Acc:ZDB-GENE-130530-667]
57. nupr1 6040 0.885 - 0.885 - - - - - - - nuclear protein 1
58. SEMA4B SEMA4B 1259 0.884 - - - - - - - 0.884 -
59. si:dkey-242h9.3 ENSDARG00000069189 83 0.884 0.884 - - - - - - - - si:dkey-242h9.3 [Source:ZFIN;Acc:ZDB-GENE-060503-347]
60. CACUL1 ENSDARG00000021885 691 0.884 0.884 - - - - - - - - CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
61. lin7b ENSDARG00000037932 150 0.883 0.883 - - - - - - - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
62. ldb2a ENSDARG00000019579 26 0.883 0.883 - - - - - - - - LIM domain binding 2a [Source:ZFIN;Acc:ZDB-GENE-990415-136]
63. CABZ01060813.1 CABZ01060813.1 12 0.883 0.883 - - - - - - - -
64. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 0.882 - - - - - - - 0.882 - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
65. si:dkeyp-52c3.2 ENSDARG00000070516 92 0.882 0.882 - - - - - - - - si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46]
66. smcr8a ENSDARG00000052818 559 0.881 0.881 - - - - - - - - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
67. sstr3 ENSDARG00000014477 14 0.88 0.880 - - - - - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
68. LENG9 ENSDARG00000062374, ENSDARG00000111560 182 0.88 0.880 - - - - - - - - leukocyte receptor cluster (LRC) member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-607]
69. CABZ01071909.1_1 ENSDARG00000117524 86 0.88 0.880 - - - - - - - -
70. racgap1 ENSDARG00000015460 38 0.88 0.880 - - - - - - - - Rac GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1917]
71. foxi1 ENSDARG00000104566 176 0.88 0.880 - - - - - - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
72. si:ch211-212i14.2 si:ch211-212i14.2 9 0.88 0.880 - - - - - - - -
73. si:dkey-176g1.6 si:dkey-176g1.6 5 0.88 0.880 - - - - - - - -
74. pag1 ENSDARG00000055875 21 0.88 0.880 - - - - - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
75. C24H8orf44 C24H8orf44 405 0.88 0.880 - - - - - - - -
76. si:ch211-162i8.4 ENSDARG00000087168, ENSDARG00000094484 69 0.88 0.880 - - - - - - - - si:ch211-162i8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-48]
77. CU019646.1 ENSDARG00000117632 223 0.88 0.880 - - - - - - - - uncharacterized LOC110439932 [Source:NCBI gene;Acc:110439932]
78. CABZ01072511.1 CABZ01072511.1 88 0.88 0.880 - - - - - - - -
79. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 0.88 0.880 - - - - - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
80. si:dkey-27p18.3 ENSDARG00000092228 38 0.88 0.880 - - - - - - - - si:dkey-27p18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-287]
81. si:dkey-56e5.2 si:dkey-56e5.2 14 0.88 0.880 - - - - - - - -
82. zgc:114037_3 17 0.88 0.880 - - - - - - - - zgc:114037
83. LPL_1 LPL_1 1150 0.88 0.880 - - - - - - - -
84. PATL2 PATL2 10 0.88 0.880 - - - - - - - -
85. PPP1R16A ENSDARG00000076980 40 0.88 0.880 - - - - - - - - protein phosphatase 1, regulatory subunit 16A [Source:ZFIN;Acc:ZDB-GENE-121214-252]
86. OVOL1 75 0.88 0.880 - - - - - - - - ovo-like zinc finger 1, transcript variant X1
87. si:dkey-4c15.5 si:dkey-4c15.5 36 0.88 0.880 - - - - - - - -
88. si:dkey-4c15.13 ENSDARG00000095704 13 0.88 0.880 - - - - - - - - si:dkey-4c15.13 [Source:ZFIN;Acc:ZDB-GENE-030131-2023]
89. DLEU7 DLEU7 91 0.878 0.878 - - - - - - - -
90. tbl2 ENSDARG00000043357 125 0.877 0.877 - - - - - - - - transducin (beta)-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9012]
91. flt3 ENSDARG00000058503 32 0.877 0.877 - - - - - - - - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
92. akr7a3 ENSDARG00000016649 314 0.875 0.875 - - - - - - - - aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-040718-62]
93. LAMB3 LAMB3 31 0.874 0.874 - - - - - - - -
94. BX470189.1 ENSDARG00000067658 399 0.873 0.873 - - - - - - - - uncharacterized LOC100150296 [Source:NCBI gene;Acc:100150296]
95. foxn3 ENSDARG00000012833 169 0.873 0.873 - - - - - - - - forkhead box N3 [Source:ZFIN;Acc:ZDB-GENE-060512-39]
96. C7 C7 81 0.872 0.872 - - - - - - - -
97. gng12a ENSDARG00000003375 1250 0.872 0.872 - - - - - - - - guanine nucleotide binding protein (G protein), gamma 12a [Source:ZFIN;Acc:ZDB-GENE-040426-2555]
98. rbm18 ENSDARG00000044255, ENSDARG00000111311 589 0.871 0.871 - - - - - - - - RNA binding motif protein 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1764]
99. st6galnac4 ENSDARG00000100804 583 0.871 - - - - - - 0.871 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-060322-6]
100. ctnnd1 ENSDARG00000078233 2520 0.87 - 0.870 - - - - - - - catenin (cadherin-associated protein), delta 1 [Source:ZFIN;Acc:ZDB-GENE-110208-9]

There are 1058 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA