Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nr1h4

Gene Name Gene ID Reads Annotation
nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]










Genes with expression patterns similar to nr1h4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000 nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
2. CCKBR CCKBR 88 2.23 0.749 - 0.772 - 0.709 - - - -
3. CABZ01067072.1 CABZ01067072.1 17 2 1.000 1.000 - - - - - - -
4. si:ch211-51n3.1 si:ch211-51n3.1 26 1.896 0.896 1.000 - - - - - - -
5. si:ch211-202h22.7 ENSDARG00000073912 18 1.891 - 0.900 0.991 - - - - - - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
6. chrna7 ENSDARG00000101702 50 1.876 1.000 0.876 - - - - - - - cholinergic receptor, nicotinic, alpha 7 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-3]
7. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1.875 - - 1.000 - - - - 0.875 - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
8. AGAP3_1 AGAP3_1 18 1.864 - 1.000 - - 0.864 - - - -
9. dlx1a ENSDARG00000013125 142 1.858 0.858 1.000 - - - - - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
10. tnnt2a ENSDARG00000020610 313 1.799 0.799 1.000 - - - - - - - troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
11. fam166b ENSDARG00000100292 14 1.761 1.000 - - - - - - - 0.761 family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
12. CR677591.1 CR677591.1 19 1.735 - 0.974 - - - - - - 0.761
13. ACBD3 ENSDARG00000042623 159 1.727 0.788 0.939 - - - - - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
14. tdrd9 ENSDARG00000013453 22 1.72 0.742 0.978 - - - - - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
15. cox5b2 ENSDARG00000068738 182 1.719 0.968 0.751 - - - - - - - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
16. si:ch211-102c2.8 ENSDARG00000093823 168 1.715 0.910 0.805 - - - - - - - si:ch211-102c2.8 [Source:ZFIN;Acc:ZDB-GENE-081104-98]
17. dio2 ENSDARG00000094857 17 1.714 1.000 - - - 0.714 - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
18. si:dkey-189d19.2 si:dkey-189d19.2 45 1.713 0.947 0.766 - - - - - - -
19. si:dkey-4c15.14 ENSDARG00000094410 107 1.703 0.742 0.961 - - - - - - - si:dkey-4c15.14 [Source:ZFIN;Acc:ZDB-GENE-050420-79]
20. zgc:174573 ENSDARG00000079035 89 1.695 0.854 - - - - - - 0.841 - zgc:174573 [Source:ZFIN;Acc:ZDB-GENE-030131-2123]
21. rab3db ENSDARG00000101534 45 1.688 0.732 0.956 - - - - - - - RAB3D, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-428]
22. bbs2 ENSDARG00000041621, ENSDARG00000110124 321 1.668 0.811 0.857 - - - - - - - Bardet-Biedl syndrome 2 [Source:ZFIN;Acc:ZDB-GENE-020801-1]
23. FP103003.1 FP103003.1 167 1.655 - 0.817 - - - - - 0.838 -
24. FOLR1 FOLR1 25 1.651 0.761 - 0.890 - - - - - -
25. ntf3 ENSDARG00000059043 355 1.639 0.846 0.793 - - - - - - - neurotrophin 3 [Source:ZFIN;Acc:ZDB-GENE-031118-66]
26. si:dkeyp-75d2.5 si:dkeyp-75d2.5 21 1.605 - 0.869 0.736 - - - - - -
27. abhd6a ENSDARG00000060756 122 1.585 0.798 0.787 - - - - - - - abhydrolase domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-090925-1]
28. wash wash 172 1.585 0.798 - - - - - - 0.787 -
29. FOXN2 FOXN2 118 1.574 0.742 0.832 - - - - - - -
30. fhl3b ENSDARG00000104315 359 1.567 0.767 0.800 - - - - - - - four and a half LIM domains 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8356]
31. ephb2b ENSDARG00000021539 521 1.466 0.722 0.744 - - - - - - - eph receptor B2b [Source:ZFIN;Acc:ZDB-GENE-050522-415]
32. RPUSD2 ENSDARG00000060992 107 1.439 0.700 0.739 - - - - - - - RNA pseudouridylate synthase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120411-43]
33. cbln10 ENSDARG00000023157 17 1.417 0.702 - - - - - - 0.715 - cerebellin 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4615]
34. SLC38A8 SLC38A8 17 1 1.000 - - - - - - - -
35. SLC22A14 SLC22A14 24 1 1.000 - - - - - - - -
36. CR628395.1 ENSDARG00000116298 75 1 1.000 - - - - - - - -
37. fnbp1 fnbp1 5 1 1.000 - - - - - - - -
38. C20H1orf95 C20H1orf95 12 1 - 1.000 - - - - - - -
39. dnah7 ENSDARG00000060165 21 1 - 1.000 - - - - - - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
40. zgc:162592 ENSDARG00000101787 5 1 - 1.000 - - - - - - - zgc:162592 [Source:ZFIN;Acc:ZDB-GENE-030131-5400]
41. si:dkey-3d18.5 ENSDARG00000096239 3 1 1.000 - - - - - - - - si:dkey-3d18.5 [Source:ZFIN;Acc:ZDB-GENE-120215-143]
42. bcl9l ENSDARG00000055054 128 1 1.000 - - - - - - - - B cell CLL/lymphoma 9-like [Source:ZFIN;Acc:ZDB-GENE-040927-29]
43. ca4b ENSDARG00000042293 5 1 - 1.000 - - - - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
44. skila ENSDARG00000023933 2 1 - 1.000 - - - - - - - SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
45. BX601644.1 ENSDARG00000090632 2 1 1.000 - - - - - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]
46. lamb1a_1 ENSDARG00000101209 13 1 1.000 - - - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
47. si:dkeyp-73d8.8 ENSDARG00000094045 17 1 1.000 - - - - - - - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
48. socs1a ENSDARG00000038095 20 1 1.000 - - - - - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
49. crygmx ENSDARG00000053862 482 1 1.000 - - - - - - - - crystallin, gamma MX [Source:ZFIN;Acc:ZDB-GENE-030131-7732]
50. si:dkey-162h11.2 si:dkey-162h11.2 257 1 1.000 - - - - - - - -
51. clcn1b ENSDARG00000012269 12 1 - - 1.000 - - - - - - chloride channel, voltage-sensitive 1b [Source:ZFIN;Acc:ZDB-GENE-100921-11]
52. CU915778.2 CU915778.2 194 1 1.000 - - - - - - - -
53. fopnl ENSDARG00000071198 1002 1 - 1.000 - - - - - - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
54. gb:am422109 gb:am422109 3 1 - 1.000 - - - - - - -
55. rp1 ENSDARG00000077687 18 1 1.000 - - - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
56. inppl1b ENSDARG00000001442 41 1 - 1.000 - - - - - - - inositol polyphosphate phosphatase-like 1b [Source:ZFIN;Acc:ZDB-GENE-030616-75]
57. sema6d ENSDARG00000002748 133 1 1.000 - - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
58. samd7 ENSDARG00000060354 15 1 - - 1.000 - - - - - - sterile alpha motif domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-549]
59. slc37a1 ENSDARG00000086103 16 1 - 1.000 - - - - - - - solute carrier family 37 (glucose-6-phosphate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-041114-151]
60. rhof ENSDARG00000054389, ENSDARG00000111798 15 1 1.000 - - - - - - - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
61. CABZ01049058.1 CABZ01049058.1 7 1 1.000 - - - - - - - -
62. npdc1 npdc1 221 1 1.000 - - - - - - - -
63. PLB1 PLB1 20 1 1.000 - - - - - - - -
64. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1 1.000 - - - - - - - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
65. wnt8b ENSDARG00000006911 98 1 - 1.000 - - - - - - - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
66. Mar-04 Mar-04 21 1 - 1.000 - - - - - - -
67. BX548078.2 BX548078.2 6 1 - - 1.000 - - - - - -
68. ulk3 ENSDARG00000101661 69 1 - 1.000 - - - - - - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
69. ENSDARG00000089152 ENSDARG00000089152 12 1 1.000 - - - - - - - -
70. TSPEAR TSPEAR 9 1 - 1.000 - - - - - - -
71. sst2 ENSDARG00000014190 617 1 1.000 - - - - - - - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
72. CD53 CD53 108 1 1.000 - - - - - - - -
73. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1 1.000 - - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
74. zswim6 ENSDARG00000101282 1 1 - - 1.000 - - - - - - zinc finger, SWIM-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-060602-4]
75. si:ch211-188c16.1 ENSDARG00000077288 16 1 - 1.000 - - - - - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
76. C10H5orf42 C10H5orf42 5 1 1.000 - - - - - - - -
77. si:ch211-171b20.3 ENSDARG00000094794 2 1 1.000 - - - - - - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]
78. CR352256.1 CR352256.1 3 1 1.000 - - - - - - - -
79. zgc:173729 3 1 - 1.000 - - - - - - - zgc:173729
80. dfnb31b 1 1 - - 1.000 - - - - - - deafness, autosomal recessive 31b, transcript variant X2
81. neu4 ENSDARG00000057677 1 1 - - 1.000 - - - - - - sialidase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-125]
82. tlcd1 ENSDARG00000002391 90 1 1.000 - - - - - - - - TLC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-173]
83. si:ch1073-75o15.4 ENSDARG00000094478 1 1 - - 1.000 - - - - - - si:ch1073-75o15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-199]
84. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 1 - 1.000 - - - - - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
85. C11H1orf116 C11H1orf116 9 1 1.000 - - - - - - - -
86. CABZ01083834.1 CABZ01083834.1 38 1 - 1.000 - - - - - - -
87. acoxl ENSDARG00000020149 14 1 - 1.000 - - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
88. FP103003.1_1 FP103003.1_1 6 1 1.000 - - - - - - - -
89. si:dkey-85n7.8 ENSDARG00000095793 31 1 - 1.000 - - - - - - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]
90. sorcs3b ENSDARG00000077349 72 1 - 1.000 - - - - - - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
91. nr2e1 ENSDARG00000017107 340 1 1.000 - - - - - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
92. SPAG16 7 1 1.000 - - - - - - - - sperm associated antigen 16
93. si:dkey-3b8.4 si:dkey-3b8.4 13 1 1.000 - - - - - - - -
94. si:dkey-105n5.3 si:dkey-105n5.3 9 1 1.000 - - - - - - - -
95. si:ch211-196c10.13 ENSDARG00000096756 28 1 1.000 - - - - - - - - si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
96. si:dkey-165g20.2 si:dkey-165g20.2 3 1 - 1.000 - - - - - - -
97. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1 1.000 - - - - - - - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
98. tcf3a ENSDARG00000005915 12 1 1.000 - - - - - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
99. kcnc2 ENSDARG00000057468 12 1 - - 1.000 - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
100. gabrr2b ENSDARG00000014057 9 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]

There are 937 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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