Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nr1h4

Gene Name Gene ID Reads Annotation
nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]










Genes with expression patterns similar to nr1h4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000 nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
2. CCKBR CCKBR 88 2.23 0.749 - 0.772 - 0.709 - - - -
3. CABZ01067072.1 CABZ01067072.1 17 2 1.000 1.000 - - - - - - -
4. si:ch211-51n3.1 si:ch211-51n3.1 26 1.896 0.896 1.000 - - - - - - -
5. si:ch211-202h22.7 ENSDARG00000073912 18 1.891 - 0.900 0.991 - - - - - - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
6. chrna7 ENSDARG00000101702 50 1.876 1.000 0.876 - - - - - - - cholinergic receptor, nicotinic, alpha 7 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-3]
7. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1.875 - - 1.000 - - - - 0.875 - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
8. AGAP3_1 AGAP3_1 18 1.864 - 1.000 - - 0.864 - - - -
9. dlx1a ENSDARG00000013125 142 1.858 0.858 1.000 - - - - - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
10. tnnt2a ENSDARG00000020610 313 1.799 0.799 1.000 - - - - - - - troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
11. fam166b ENSDARG00000100292 14 1.761 1.000 - - - - - - - 0.761 family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
12. CR677591.1 CR677591.1 19 1.735 - 0.974 - - - - - - 0.761
13. ACBD3 ENSDARG00000042623 159 1.727 0.788 0.939 - - - - - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
14. tdrd9 ENSDARG00000013453 22 1.72 0.742 0.978 - - - - - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
15. cox5b2 ENSDARG00000068738 182 1.719 0.968 0.751 - - - - - - - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
16. si:ch211-102c2.8 ENSDARG00000093823 168 1.715 0.910 0.805 - - - - - - - si:ch211-102c2.8 [Source:ZFIN;Acc:ZDB-GENE-081104-98]
17. dio2 ENSDARG00000094857 17 1.714 1.000 - - - 0.714 - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
18. si:dkey-189d19.2 si:dkey-189d19.2 45 1.713 0.947 0.766 - - - - - - -
19. si:dkey-4c15.14 ENSDARG00000094410 107 1.703 0.742 0.961 - - - - - - - si:dkey-4c15.14 [Source:ZFIN;Acc:ZDB-GENE-050420-79]
20. zgc:174573 ENSDARG00000079035 89 1.695 0.854 - - - - - - 0.841 - zgc:174573 [Source:ZFIN;Acc:ZDB-GENE-030131-2123]
21. rab3db ENSDARG00000101534 45 1.688 0.732 0.956 - - - - - - - RAB3D, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-428]
22. bbs2 ENSDARG00000041621, ENSDARG00000110124 321 1.668 0.811 0.857 - - - - - - - Bardet-Biedl syndrome 2 [Source:ZFIN;Acc:ZDB-GENE-020801-1]
23. FP103003.1 FP103003.1 167 1.655 - 0.817 - - - - - 0.838 -
24. FOLR1 FOLR1 25 1.651 0.761 - 0.890 - - - - - -
25. ntf3 ENSDARG00000059043 355 1.639 0.846 0.793 - - - - - - - neurotrophin 3 [Source:ZFIN;Acc:ZDB-GENE-031118-66]
26. si:dkeyp-75d2.5 si:dkeyp-75d2.5 21 1.605 - 0.869 0.736 - - - - - -
27. wash wash 172 1.585 0.798 - - - - - - 0.787 -
28. abhd6a ENSDARG00000060756 122 1.585 0.798 0.787 - - - - - - - abhydrolase domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-090925-1]
29. FOXN2 FOXN2 118 1.574 0.742 0.832 - - - - - - -
30. fhl3b ENSDARG00000104315 359 1.567 0.767 0.800 - - - - - - - four and a half LIM domains 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8356]
31. ephb2b ENSDARG00000021539 521 1.466 0.722 0.744 - - - - - - - eph receptor B2b [Source:ZFIN;Acc:ZDB-GENE-050522-415]
32. RPUSD2 ENSDARG00000060992 107 1.439 0.700 0.739 - - - - - - - RNA pseudouridylate synthase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120411-43]
33. cbln10 ENSDARG00000023157 17 1.417 0.702 - - - - - - 0.715 - cerebellin 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4615]
34. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1 1.000 - - - - - - - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
35. si:dkey-3d18.5 ENSDARG00000096239 3 1 1.000 - - - - - - - - si:dkey-3d18.5 [Source:ZFIN;Acc:ZDB-GENE-120215-143]
36. si:ch211-199g17.8 si:ch211-199g17.8 9 1 - - 1.000 - - - - - -
37. si:dkey-105n5.3 si:dkey-105n5.3 9 1 1.000 - - - - - - - -
38. npdc1 npdc1 221 1 1.000 - - - - - - - -
39. gabpb1 ENSDARG00000023659 26 1 1.000 - - - - - - - - GA binding protein transcription factor subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061027-46]
40. otx1a 1607 1 1.000 - - - - - - - - orthodenticle homeobox 1a
41. zswim6 ENSDARG00000101282 1 1 - - 1.000 - - - - - - zinc finger, SWIM-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-060602-4]
42. fank1 ENSDARG00000039657 9 1 - - 1.000 - - - - - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
43. BX601644.1 ENSDARG00000090632 2 1 1.000 - - - - - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]
44. rp1 ENSDARG00000077687 18 1 1.000 - - - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
45. PLB1 PLB1 20 1 1.000 - - - - - - - -
46. slc46a3 ENSDARG00000077313 14 1 - 1.000 - - - - - - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
47. pcdh1g9 ENSDARG00000057519 6 1 - - - - 1.000 - - - - protocadherin 1 gamma 9 [Source:ZFIN;Acc:ZDB-GENE-050609-5]
48. crygmx ENSDARG00000053862 482 1 1.000 - - - - - - - - crystallin, gamma MX [Source:ZFIN;Acc:ZDB-GENE-030131-7732]
49. C5H9orf9 C5H9orf9 6 1 1.000 - - - - - - - -
50. nphs2 ENSDARG00000042850 31 1 - 1.000 - - - - - - - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
51. SLC38A8 SLC38A8 17 1 1.000 - - - - - - - -
52. si:dkey-71l1.1 ENSDARG00000052411 11 1 1.000 - - - - - - - - si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
53. il11b ENSDARG00000058557 17 1 - 1.000 - - - - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
54. rgs13 ENSDARG00000017653 8 1 1.000 - - - - - - - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
55. smpdl3a ENSDARG00000053119 1 1 - - 1.000 - - - - - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
56. pcdh1a3 ENSDARG00000103602 4 1 - 1.000 - - - - - - - protocadherin 1 alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050202-3]
57. crybb1l2 ENSDARG00000016793 723 1 1.000 - - - - - - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
58. klc4_1 ENSDARG00000086985 22 1 1.000 - - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
59. runx2b ENSDARG00000059233 106 1 - 1.000 - - - - - - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
60. TEAD1 TEAD1 43 1 1.000 - - - - - - - -
61. fnbp1 fnbp1 5 1 1.000 - - - - - - - -
62. anxa2b ENSDARG00000053625, ENSDARG00000116775, ENSDARG00000117092 55 1 - 1.000 - - - - - - - annexin A2b [Source:ZFIN;Acc:ZDB-GENE-030131-1089]
63. lamb1a_1 ENSDARG00000101209 13 1 1.000 - - - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
64. CR628395.1 ENSDARG00000116298 75 1 1.000 - - - - - - - -
65. runx2a ENSDARG00000040261 1 1 - - 1.000 - - - - - - runt-related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-040629-3]
66. sorcs3b ENSDARG00000077349 72 1 - 1.000 - - - - - - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
67. caps2 ENSDARG00000058486 4 1 1.000 - - - - - - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
68. klhl42 ENSDARG00000006011 46 1 1.000 - - - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
69. gb:am422109 gb:am422109 3 1 - 1.000 - - - - - - -
70. skila ENSDARG00000023933 2 1 - 1.000 - - - - - - - SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
71. CD53 CD53 108 1 1.000 - - - - - - - -
72. BX548078.2 BX548078.2 6 1 - - 1.000 - - - - - -
73. C20H1orf95 C20H1orf95 12 1 - 1.000 - - - - - - -
74. CR792453.1 ENSDARG00000095699 4 1 - - 1.000 - - - - - -
75. CU915778.2 CU915778.2 194 1 1.000 - - - - - - - -
76. SPAG16 7 1 1.000 - - - - - - - - sperm associated antigen 16
77. si:dkeyp-15f12.4 si:dkeyp-15f12.4 2 1 - 1.000 - - - - - - -
78. ankar ENSDARG00000000516 3 1 - - 1.000 - - - - - - ankyrin and armadillo repeat containing [Source:ZFIN;Acc:ZDB-GENE-030616-533]
79. pcolce2b ENSDARG00000055575 2 1 1.000 - - - - - - - - procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
80. nr2e1 ENSDARG00000017107 340 1 1.000 - - - - - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
81. si:dkey-259p7.1 si:dkey-259p7.1 59 1 1.000 - - - - - - - -
82. C10H5orf42 C10H5orf42 5 1 1.000 - - - - - - - -
83. admb ENSDARG00000069027 67 1 1.000 - - - - - - - - adrenomedullin b [Source:ZFIN;Acc:ZDB-GENE-120221-6]
84. FP103003.1_1 FP103003.1_1 6 1 1.000 - - - - - - - -
85. slc37a1 ENSDARG00000086103 16 1 - 1.000 - - - - - - - solute carrier family 37 (glucose-6-phosphate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-041114-151]
86. SNAPC2 ENSDARG00000036473 158 1 - 1.000 - - - - - - - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
87. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1 1.000 - - - - - - - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
88. si:ch211-196c10.13 ENSDARG00000096756 28 1 1.000 - - - - - - - - si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
89. dfnb31b 1 1 - - 1.000 - - - - - - deafness, autosomal recessive 31b, transcript variant X2
90. SLC22A14 SLC22A14 24 1 1.000 - - - - - - - -
91. acoxl ENSDARG00000020149 14 1 - 1.000 - - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
92. ugt2b3 46 1 1.000 - - - - - - - - UDP glucuronosyltransferase 2 family, polypeptide B3
93. camk1ga ENSDARG00000044526 5 1 - 1.000 - - - - - - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
94. nipa1 ENSDARG00000055917 132 1 1.000 - - - - - - - - NIPA magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-041010-164]
95. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1 1.000 - - - - - - - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
96. si:ch211-152p23.2 ENSDARG00000094519 4 1 1.000 - - - - - - - - si:ch211-152p23.2 [Source:ZFIN;Acc:ZDB-GENE-081104-134]
97. si:dkey-10o6.2 ENSDARG00000074628 22 1 - 1.000 - - - - - - - si:dkey-10o6.2 [Source:ZFIN;Acc:ZDB-GENE-070705-284]
98. clcn1b ENSDARG00000012269 12 1 - - 1.000 - - - - - - chloride channel, voltage-sensitive 1b [Source:ZFIN;Acc:ZDB-GENE-100921-11]
99. TDRD12 ENSDARG00000075217 3 1 - - 1.000 - - - - - - tudor domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-121214-348]
100. C11H1orf116 C11H1orf116 9 1 1.000 - - - - - - - -

There are 937 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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