Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nr1h4

Gene Name Gene ID Reads Annotation
nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]










Genes with expression patterns similar to nr1h4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000 nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
2. CCKBR CCKBR 88 2.23 0.749 - 0.772 - 0.709 - - - -
3. CABZ01067072.1 CABZ01067072.1 17 2 1.000 1.000 - - - - - - -
4. si:ch211-51n3.1 si:ch211-51n3.1 26 1.896 0.896 1.000 - - - - - - -
5. si:ch211-202h22.7 ENSDARG00000073912 18 1.891 - 0.900 0.991 - - - - - - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
6. chrna7 ENSDARG00000101702 50 1.876 1.000 0.876 - - - - - - - cholinergic receptor, nicotinic, alpha 7 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-3]
7. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1.875 - - 1.000 - - - - 0.875 - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
8. AGAP3_1 AGAP3_1 18 1.864 - 1.000 - - 0.864 - - - -
9. dlx1a ENSDARG00000013125 142 1.858 0.858 1.000 - - - - - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
10. tnnt2a ENSDARG00000020610 313 1.799 0.799 1.000 - - - - - - - troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
11. fam166b ENSDARG00000100292 14 1.761 1.000 - - - - - - - 0.761 family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
12. CR677591.1 CR677591.1 19 1.735 - 0.974 - - - - - - 0.761
13. ACBD3 ENSDARG00000042623 159 1.727 0.788 0.939 - - - - - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
14. tdrd9 ENSDARG00000013453 22 1.72 0.742 0.978 - - - - - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
15. cox5b2 ENSDARG00000068738 182 1.719 0.968 0.751 - - - - - - - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
16. si:ch211-102c2.8 ENSDARG00000093823 168 1.715 0.910 0.805 - - - - - - - si:ch211-102c2.8 [Source:ZFIN;Acc:ZDB-GENE-081104-98]
17. dio2 ENSDARG00000094857 17 1.714 1.000 - - - 0.714 - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
18. si:dkey-189d19.2 si:dkey-189d19.2 45 1.713 0.947 0.766 - - - - - - -
19. si:dkey-4c15.14 ENSDARG00000094410 107 1.703 0.742 0.961 - - - - - - - si:dkey-4c15.14 [Source:ZFIN;Acc:ZDB-GENE-050420-79]
20. zgc:174573 ENSDARG00000079035 89 1.695 0.854 - - - - - - 0.841 - zgc:174573 [Source:ZFIN;Acc:ZDB-GENE-030131-2123]
21. rab3db ENSDARG00000101534 45 1.688 0.732 0.956 - - - - - - - RAB3D, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-428]
22. bbs2 ENSDARG00000041621, ENSDARG00000110124 321 1.668 0.811 0.857 - - - - - - - Bardet-Biedl syndrome 2 [Source:ZFIN;Acc:ZDB-GENE-020801-1]
23. FP103003.1 FP103003.1 167 1.655 - 0.817 - - - - - 0.838 -
24. FOLR1 FOLR1 25 1.651 0.761 - 0.890 - - - - - -
25. ntf3 ENSDARG00000059043 355 1.639 0.846 0.793 - - - - - - - neurotrophin 3 [Source:ZFIN;Acc:ZDB-GENE-031118-66]
26. si:dkeyp-75d2.5 si:dkeyp-75d2.5 21 1.605 - 0.869 0.736 - - - - - -
27. wash wash 172 1.585 0.798 - - - - - - 0.787 -
28. abhd6a ENSDARG00000060756 122 1.585 0.798 0.787 - - - - - - - abhydrolase domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-090925-1]
29. FOXN2 FOXN2 118 1.574 0.742 0.832 - - - - - - -
30. fhl3b ENSDARG00000104315 359 1.567 0.767 0.800 - - - - - - - four and a half LIM domains 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8356]
31. ephb2b ENSDARG00000021539 521 1.466 0.722 0.744 - - - - - - - eph receptor B2b [Source:ZFIN;Acc:ZDB-GENE-050522-415]
32. RPUSD2 ENSDARG00000060992 107 1.439 0.700 0.739 - - - - - - - RNA pseudouridylate synthase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120411-43]
33. cbln10 ENSDARG00000023157 17 1.417 0.702 - - - - - - 0.715 - cerebellin 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4615]
34. il11b ENSDARG00000058557 17 1 - 1.000 - - - - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
35. si:ch211-171b20.3 ENSDARG00000094794 2 1 1.000 - - - - - - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]
36. nr2e1 ENSDARG00000017107 340 1 1.000 - - - - - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
37. si:ch211-188c16.1 ENSDARG00000077288 16 1 - 1.000 - - - - - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
38. CABZ01049058.1 CABZ01049058.1 7 1 1.000 - - - - - - - -
39. sorcs3b ENSDARG00000077349 72 1 - 1.000 - - - - - - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
40. CR352256.1 CR352256.1 3 1 1.000 - - - - - - - -
41. admb ENSDARG00000069027 67 1 1.000 - - - - - - - - adrenomedullin b [Source:ZFIN;Acc:ZDB-GENE-120221-6]
42. zp2l1 ENSDARG00000055415, ENSDARG00000110573 2 1 1.000 - - - - - - - - zona pellucida glycoprotein 2, like 1 [Source:ZFIN;Acc:ZDB-GENE-060818-3]
43. C6H21orf58 C6H21orf58 14 1 1.000 - - - - - - - -
44. TSPEAR TSPEAR 9 1 - 1.000 - - - - - - -
45. nipa1 ENSDARG00000055917 132 1 1.000 - - - - - - - - NIPA magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-041010-164]
46. ca4b ENSDARG00000042293 5 1 - 1.000 - - - - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
47. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1 1.000 - - - - - - - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
48. ENSDARG00000089152 ENSDARG00000089152 12 1 1.000 - - - - - - - -
49. gb:am422109 gb:am422109 3 1 - 1.000 - - - - - - -
50. C3H16orf89 C3H16orf89 449 1 1.000 - - - - - - - -
51. si:ch211-199g17.8 si:ch211-199g17.8 9 1 - - 1.000 - - - - - -
52. anxa2b ENSDARG00000053625, ENSDARG00000116775, ENSDARG00000117092 55 1 - 1.000 - - - - - - - annexin A2b [Source:ZFIN;Acc:ZDB-GENE-030131-1089]
53. mir30b 4 1 1.000 - - - - - - - - microRNA 30b
54. si:ch211-152p23.2 ENSDARG00000094519 4 1 1.000 - - - - - - - - si:ch211-152p23.2 [Source:ZFIN;Acc:ZDB-GENE-081104-134]
55. klc4_1 ENSDARG00000086985 22 1 1.000 - - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
56. npdc1 npdc1 221 1 1.000 - - - - - - - -
57. pcolce2b ENSDARG00000055575 2 1 1.000 - - - - - - - - procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
58. si:dkey-10o6.2 ENSDARG00000074628 22 1 - 1.000 - - - - - - - si:dkey-10o6.2 [Source:ZFIN;Acc:ZDB-GENE-070705-284]
59. runx2a ENSDARG00000040261 1 1 - - 1.000 - - - - - - runt-related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-040629-3]
60. stk33 ENSDARG00000054318, ENSDARG00000114909 34 1 1.000 - - - - - - - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
61. si:dkey-259p7.1 si:dkey-259p7.1 59 1 1.000 - - - - - - - -
62. C10H5orf42 C10H5orf42 5 1 1.000 - - - - - - - -
63. CABZ01076533.1 CABZ01076533.1 2 1 - 1.000 - - - - - - -
64. CABZ01083834.1 CABZ01083834.1 38 1 - 1.000 - - - - - - -
65. crygmx ENSDARG00000053862 482 1 1.000 - - - - - - - - crystallin, gamma MX [Source:ZFIN;Acc:ZDB-GENE-030131-7732]
66. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 1 - 1.000 - - - - - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
67. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1 1.000 - - - - - - - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
68. si:dkeyp-15f12.4 si:dkeyp-15f12.4 2 1 - 1.000 - - - - - - -
69. C5H9orf9 C5H9orf9 6 1 1.000 - - - - - - - -
70. otx1a 1607 1 1.000 - - - - - - - - orthodenticle homeobox 1a
71. DEF6 DEF6 19 1 - 1.000 - - - - - - -
72. tmem26b ENSDARG00000014682 2 1 - - 1.000 - - - - - - transmembrane protein 26b [Source:ZFIN;Acc:ZDB-GENE-080204-66]
73. smpdl3a ENSDARG00000053119 1 1 - - 1.000 - - - - - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
74. si:dkey-115f9.2 si:dkey-115f9.2 18 1 - - 1.000 - - - - - -
75. skila ENSDARG00000023933 2 1 - 1.000 - - - - - - - SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
76. acoxl ENSDARG00000020149 14 1 - 1.000 - - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
77. BX601644.1 ENSDARG00000090632 2 1 1.000 - - - - - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]
78. smad6b ENSDARG00000031763 12 1 - 1.000 - - - - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
79. si:ch211-196c10.13 ENSDARG00000096756 28 1 1.000 - - - - - - - - si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
80. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1 1.000 - - - - - - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
81. dfnb31b 1 1 - - 1.000 - - - - - - deafness, autosomal recessive 31b, transcript variant X2
82. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1 1.000 - - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
83. zgc:113425 ENSDARG00000026616 29 1 1.000 - - - - - - - - zgc:113425 [Source:ZFIN;Acc:ZDB-GENE-050320-128]
84. BX510909.1 ENSDARG00000104294 5 1 - 1.000 - - - - - - -
85. sema4aa ENSDARG00000077103 4 1 - - - - 1.000 - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Aa [Source:ZFIN;Acc:ZDB-GENE-110411-86]
86. CR792453.1 ENSDARG00000095699 4 1 - - 1.000 - - - - - -
87. runx2b ENSDARG00000059233 106 1 - 1.000 - - - - - - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
88. rhof ENSDARG00000054389, ENSDARG00000111798 15 1 1.000 - - - - - - - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
89. ankar ENSDARG00000000516 3 1 - - 1.000 - - - - - - ankyrin and armadillo repeat containing [Source:ZFIN;Acc:ZDB-GENE-030616-533]
90. bcl9l ENSDARG00000055054 128 1 1.000 - - - - - - - - B cell CLL/lymphoma 9-like [Source:ZFIN;Acc:ZDB-GENE-040927-29]
91. ighz ENSDARG00000096280 2 1 - 1.000 - - - - - - - immunoglobulin heavy constant zeta [Source:ZFIN;Acc:ZDB-GENE-040513-8]
92. si:ch211-76l23.4 ENSDARG00000096242 202 1 - 1.000 - - - - - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
93. samd7 ENSDARG00000060354 15 1 - - 1.000 - - - - - - sterile alpha motif domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-549]
94. si:dkeyp-73d8.8 ENSDARG00000094045 17 1 1.000 - - - - - - - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
95. zgc:153921_1 ENSDARG00000020738, ENSDARG00000038405 19 1 1.000 - - - - - - - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
96. si:dkey-3b8.4 si:dkey-3b8.4 13 1 1.000 - - - - - - - -
97. dnase1l3l dnase1l3l 16 1 1.000 - - - - - - - -
98. neu4 ENSDARG00000057677 1 1 - - 1.000 - - - - - - sialidase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-125]
99. wnt8b ENSDARG00000006911 98 1 - 1.000 - - - - - - - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
100. camk1ga ENSDARG00000044526 5 1 - 1.000 - - - - - - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]

There are 937 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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