Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nr1d1

Gene Name Gene ID Reads Annotation
nr1d1 ENSDARG00000033160 3 nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]










Genes with expression patterns similar to nr1d1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr1d1 ENSDARG00000033160 3 3 - - 1.000 1.000 1.000 - - - - nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]
2. fip1l1a ENSDARG00000043328 7 1.782 - - 0.813 0.969 - - - - - FIP1 like 1a (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-8]
3. si:dkeyp-101e12.1 ENSDARG00000089794 0 1 - - - 1.000 - - - - - si:dkeyp-101e12.1 [Source:ZFIN;Acc:ZDB-GENE-091113-32]
4. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - 1.000 - - - - -
5. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - 1.000 - - - - - -
6. C6H16orf45 C6H16orf45 0 1 - - - 1.000 - - - - -
7. TCERG1L ENSDARG00000109963 2 1 - - - 1.000 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
8. si:dkey-267i17.2 si:dkey-267i17.2 0 1 - - - 1.000 - - - - -
9. NPY2R ENSDARG00000094763, ENSDARG00000112792 1 1 - - - 1.000 - - - - - neuropeptide Y receptor Y2 [Source:ZFIN;Acc:ZDB-GENE-040924-8]
10. si:ch211-238p8.10 ENSDARG00000115284 0 1 - - - 1.000 - - - - - si:ch211-238p8.10 [Source:ZFIN;Acc:ZDB-GENE-091117-24]
11. fbxo36b ENSDARG00000039152 7 1 - - - 1.000 - - - - - F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
12. si:dkeyp-98a7.5_1 0 1 - - - 1.000 - - - - - si:dkeyp-98a7.5
13. ntrk3b ENSDARG00000086214 1 1 - - 1.000 - - - - - - neurotrophic tyrosine kinase, receptor, type 3b [Source:ZFIN;Acc:ZDB-GENE-010126-4]
14. si:dkey-238m4.4 ENSDARG00000093248 3 1 - - - 1.000 - - - - - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
15. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - 1.000 - - - - -
16. CABZ01035647.1 CABZ01035647.1 5 1 - - - 1.000 - - - - -
17. CDR2_1 CDR2_1 8 1 - - - 1.000 - - - - -
18. ghrh ENSDARG00000069481, ENSDARG00000111551 9 1 - - - 1.000 - - - - - growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
19. ENSDARG00000089437 ENSDARG00000089437 0 1 - - - 1.000 - - - - -
20. si:ch73-92e20.2 si:ch73-92e20.2 2 1 - - - 1.000 - - - - -
21. CU855733.1 CU855733.1 2 1 - - 1.000 - - - - - -
22. pappab ENSDARG00000059858 11 1 - - - 1.000 - - - - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
23. CU681842.3 CU681842.3 2 1 - - - 1.000 - - - - -
24. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - 1.000 - - - - -
25. abhd10a ENSDARG00000076435 3 1 - - - 1.000 - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
26. Metazoa_SRP_18 Metazoa_SRP_18 4 1 - - - 1.000 - - - - -
27. HEPHL1 HEPHL1 309 1 - - - 1.000 - - - - -
28. plxnd1 ENSDARG00000086057 2 1 - - 1.000 - - - - - - plexin D1 [Source:ZFIN;Acc:ZDB-GENE-040426-1828]
29. zgc:153311 ENSDARG00000015964 85 1 - - - 1.000 - - - - - zgc:153311 [Source:ZFIN;Acc:ZDB-GENE-060825-194]
30. si:dkey-96n2.1 ENSDARG00000092172 0 1 - - - 1.000 - - - - - si:dkey-96n2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1759]
31. CCSER1 ENSDARG00000075919 16 1 - - - 1.000 - - - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
32. cep170b ENSDARG00000074636 4 1 - - - 1.000 - - - - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
33. HIST1H4F HIST1H4F 1 1 - - 1.000 - - - - - -
34. si:ch211-241f4.1 si:ch211-241f4.1 2 1 - - - - 1.000 - - - -
35. si:ch211-222j14.1 si:ch211-222j14.1 0 1 - - - 1.000 - - - - -
36. CU179703.1 CU179703.1 5 1 - - - - 1.000 - - - -
37. BX511182.1 BX511182.1 8 1 - - - 1.000 - - - - -
38. si:dkey-149m13.5 ENSDARG00000094653 1 1 - - 1.000 - - - - - - si:dkey-149m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-74]
39. mamdc2a ENSDARG00000098345 21 1 - - - 1.000 - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
40. si:ch211-278f21.4 si:ch211-278f21.4 0 1 - - - 1.000 - - - - -
41. ENSDARG00000063316 ENSDARG00000063316 4 1 - - - 1.000 - - - - -
42. CABZ01059406.1 ENSDARG00000088775 1 1 - - - 1.000 - - - - -
43. si:dkey-58f10.10 ENSDARG00000094284 4 1 - - - 1.000 - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
44. ADAMTS15_1 ADAMTS15_1 11 1 - - - 1.000 - - - - -
45. HTRA3 ENSDARG00000010925 0 1 - - - 1.000 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
46. ABCC6 ABCC6 5 1 - - - 1.000 - - - - -
47. ANKRD34C 13 1 - - 1.000 - - - - - - ankyrin repeat domain 34C
48. si:dkey-106m10.5 si:dkey-106m10.5 10 1 - - - 1.000 - - - - -
49. arhgap30 arhgap30 6 1 - - - 1.000 - - - - -
50. hbaa2 ENSDARG00000069735 10 1 - - - - 1.000 - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
51. pcdh2ab7 7 1 - - - 1.000 - - - - - protocadherin 2 alpha b 7
52. si:dkeyp-66d7.4 si:dkeyp-66d7.4 2 1 - - 1.000 - - - - - -
53. notchl ENSDARG00000088308 28 1 - - - - 1.000 - - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
54. GOLT1A ENSDARG00000088933 14 1 - - 1.000 - - - - - - golgi transport 1A [Source:ZFIN;Acc:ZDB-GENE-141212-320]
55. il11b ENSDARG00000058557 17 1 - - - 1.000 - - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
56. spo11 ENSDARG00000013837 7 1 - - 1.000 - - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
57. kcnma1b 0 1 - - - 1.000 - - - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1b
58. DNM2 DNM2 2 1 - - 1.000 - - - - - -
59. CELA1_1 CELA1_1 104 1 - - - 1.000 - - - - -
60. irgq2 ENSDARG00000068657 4 1 - - - 1.000 - - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
61. apoob ENSDARG00000026444, ENSDARG00000109942 4 1 - - - 1.000 - - - - - apolipoprotein O, b [Source:ZFIN;Acc:ZDB-GENE-041001-40]
62. cyp46a4 cyp46a4 5 1 - - 1.000 - - - - - -
63. ENSDARG00000062524 ENSDARG00000062524 1 1 - - 1.000 - - - - - -
64. si:ch73-123f19.2 si:ch73-123f19.2 0 1 - - - 1.000 - - - - -
65. PEG3_13 PEG3_13 5 1 - - - 1.000 - - - - -
66. EGFR_1 EGFR_1 2 1 - - 1.000 - - - - - -
67. RIMS2 RIMS2 2 1 - - - 1.000 - - - - -
68. zgc:175136 ENSDARG00000103024 4 1 - - - 1.000 - - - - - zgc:175136 [Source:ZFIN;Acc:ZDB-GENE-080204-122]
69. erap2 ENSDARG00000098618 16 1 - - - 1.000 - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
70. hes2.1 ENSDARG00000074897 10 1 - - 1.000 - - - - - - hes family bHLH transcription factor 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081104-104]
71. csrp1b ENSDARG00000030980 2 1 - - 1.000 - - - - - - cysteine and glycine-rich protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-252]
72. cpo ENSDARG00000077688 1 1 - - - 1.000 - - - - - carboxypeptidase O [Source:ZFIN;Acc:ZDB-GENE-070619-6]
73. si:ch211-71m22.3 ENSDARG00000079075 4 1 - - - - 1.000 - - - - si:ch211-71m22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-195]
74. vti1a ENSDARG00000045065 7 1 - - - 1.000 - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:ZFIN;Acc:ZDB-GENE-050809-135]
75. CABZ01011032.1 CABZ01011032.1 1 1 - - - 1.000 - - - - -
76. GPX2 ENSDARG00000089149 10 1 - - - 1.000 - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
77. agbl5 ENSDARG00000045900 2 1 - - - 1.000 - - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
78. edn3b ENSDARG00000086669 8 1 - - - 1.000 - - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
79. ugt5g2 ENSDARG00000043901, ENSDARG00000112752 1 1 - - - 1.000 - - - - - UDP glucuronosyltransferase 5 family, polypeptide G2 [Source:ZFIN;Acc:ZDB-GENE-081028-66]
80. si:zfos-44h1.1 si:zfos-44h1.1 1 1 - - - 1.000 - - - - -
81. elmod3 ENSDARG00000074742 6 1 - - - 1.000 - - - - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
82. snoU13 snoU13 2 1 - - - 1.000 - - - - -
83. si:ch211-262h13.6 si:ch211-262h13.6 0 1 - - - 1.000 - - - - -
84. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1 - - - 1.000 - - - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
85. si:dkeyp-13a3.6 3 1 - - - - 1.000 - - - - si:dkeyp-13a3.6
86. TRIM14_5 TRIM14_5 2 1 - - 1.000 - - - - - -
87. si:ch211-187d1.1 si:ch211-187d1.1 4 1 - - 1.000 - - - - - -
88. vwf ENSDARG00000077231 5 1 - - - 1.000 - - - - - von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1]
89. BX465848.2 ENSDARG00000116920 6 1 - - - 1.000 - - - - -
90. CU469509.3 CU469509.3 1 1 - - - 1.000 - - - - -
91. CR388416.2 CR388416.2 3 1 - - - 1.000 - - - - -
92. U6_21 U6_21 0 1 - - - 1.000 - - - - -
93. sox8 sox8 109 1 - - - 1.000 - - - - -
94. si:dkeyp-104f11.9 ENSDARG00000096715 81 1 - - 1.000 - - - - - - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
95. AKNA ENSDARG00000087110 39 1 - - - 1.000 - - - - - AT-hook transcription factor [Source:ZFIN;Acc:ZDB-GENE-091204-170]
96. si:ch211-103n10.5 ENSDARG00000077504, ENSDARG00000116548 8 1 - - - 1.000 - - - - - si:ch211-103n10.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5155]
97. si:ch211-112l17.3 si:ch211-112l17.3 8 1 - - - 1.000 - - - - -
98. lmbrd2a ENSDARG00000099566 15 1 - - - 1.000 - - - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
99. CR356223.2 ENSDARG00000100655 4 1 - - - 1.000 - - - - -
100. TMC5 ENSDARG00000013252 22 1 - - 1.000 - - - - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]

There are 248 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA