Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nr1d1

Gene Name Gene ID Reads Annotation
nr1d1 ENSDARG00000033160 3 nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]










Genes with expression patterns similar to nr1d1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr1d1 ENSDARG00000033160 3 3 - - 1.000 1.000 1.000 - - - - nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]
2. fip1l1a ENSDARG00000043328 7 1.782 - - 0.813 0.969 - - - - - FIP1 like 1a (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-8]
3. irgq2 ENSDARG00000068657 4 1 - - - 1.000 - - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
4. CU469509.3 CU469509.3 1 1 - - - 1.000 - - - - -
5. ZNF423 ENSDARG00000059707 11 1 - - - 1.000 - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
6. arhgap30 arhgap30 6 1 - - - 1.000 - - - - -
7. pcdh1a6 ENSDARG00000097170 6 1 - - - 1.000 - - - - - protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
8. abhd10a ENSDARG00000076435 3 1 - - - 1.000 - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
9. si:ch73-123f19.2 si:ch73-123f19.2 0 1 - - - 1.000 - - - - -
10. hes2.1 ENSDARG00000074897 10 1 - - 1.000 - - - - - - hes family bHLH transcription factor 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081104-104]
11. si:ch211-145h19.2 7 1 - - - 1.000 - - - - - si:ch211-145h19.2
12. CR388416.2 CR388416.2 3 1 - - - 1.000 - - - - -
13. si:ch73-67c22.3 si:ch73-67c22.3 30 1 - - - 1.000 - - - - -
14. crygmxl1 ENSDARG00000018797 7 1 - - - 1.000 - - - - - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
15. ENSDARG00000063316 ENSDARG00000063316 4 1 - - - 1.000 - - - - -
16. SNORA55 SNORA55 0 1 - - - 1.000 - - - - -
17. apoob ENSDARG00000026444, ENSDARG00000109942 4 1 - - - 1.000 - - - - - apolipoprotein O, b [Source:ZFIN;Acc:ZDB-GENE-041001-40]
18. chia.3 ENSDARG00000009612 14 1 - - 1.000 - - - - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
19. BX119910.15 BX119910.15 4 1 - - - 1.000 - - - - -
20. CACNG5 CACNG5 1 1 - - - 1.000 - - - - -
21. si:dkey-267i17.2 si:dkey-267i17.2 0 1 - - - 1.000 - - - - -
22. vwf ENSDARG00000077231 5 1 - - - 1.000 - - - - - von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1]
23. fbxo36b ENSDARG00000039152 7 1 - - - 1.000 - - - - - F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
24. notchl ENSDARG00000088308 28 1 - - - - 1.000 - - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
25. si:ch73-138e16.6 ENSDARG00000101044 2 1 - - 1.000 - - - - - - si:ch73-138e16.6 [Source:ZFIN;Acc:ZDB-GENE-070705-205]
26. si:ch211-187d1.1 si:ch211-187d1.1 4 1 - - 1.000 - - - - - -
27. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - 1.000 - - - - -
28. RIMS2 RIMS2 2 1 - - - 1.000 - - - - -
29. Metazoa_SRP_18 Metazoa_SRP_18 4 1 - - - 1.000 - - - - -
30. mvb12ba ENSDARG00000091619 18 1 - - - 1.000 - - - - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
31. hbaa2 ENSDARG00000069735 10 1 - - - - 1.000 - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
32. si:dkey-58f10.10 ENSDARG00000094284 4 1 - - - 1.000 - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
33. elmod3 ENSDARG00000074742 6 1 - - - 1.000 - - - - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
34. plxnd1 ENSDARG00000086057 2 1 - - 1.000 - - - - - - plexin D1 [Source:ZFIN;Acc:ZDB-GENE-040426-1828]
35. si:ch211-103n10.5 ENSDARG00000077504, ENSDARG00000116548 8 1 - - - 1.000 - - - - - si:ch211-103n10.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5155]
36. si:dkey-27p18.6 4 1 - - - 1.000 - - - - - si:dkey-27p18.6, transcript variant X1
37. BX465848.2 ENSDARG00000116920 6 1 - - - 1.000 - - - - -
38. ugt5g2 ENSDARG00000043901, ENSDARG00000112752 1 1 - - - 1.000 - - - - - UDP glucuronosyltransferase 5 family, polypeptide G2 [Source:ZFIN;Acc:ZDB-GENE-081028-66]
39. si:ch211-262h13.6 si:ch211-262h13.6 0 1 - - - 1.000 - - - - -
40. si:ch211-112l17.3 si:ch211-112l17.3 8 1 - - - 1.000 - - - - -
41. or110-2 ENSDARG00000091172 1 1 - - 1.000 - - - - - - odorant receptor, family D, subfamily 110, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-76]
42. kcnq2a ENSDARG00000075307 7 1 - - - 1.000 - - - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
43. RAP1GDS1 ENSDARG00000073741 0 1 - - - 1.000 - - - - - Rap1 GTPase-GDP dissociation stimulator 1 [Source:HGNC Symbol;Acc:HGNC:9859]
44. TCERG1L ENSDARG00000109963 2 1 - - - 1.000 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
45. si:dkey-72l17.1 si:dkey-72l17.1 0 1 - - - 1.000 - - - - -
46. ANKRD34C 13 1 - - 1.000 - - - - - - ankyrin repeat domain 34C
47. CABZ01059406.1 ENSDARG00000088775 1 1 - - - 1.000 - - - - -
48. slc35f1 ENSDARG00000053003 0 1 - - - 1.000 - - - - - solute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
49. TMC5 ENSDARG00000013252 22 1 - - 1.000 - - - - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
50. CCSER1 ENSDARG00000075919 16 1 - - - 1.000 - - - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
51. ENSDARG00000062524 ENSDARG00000062524 1 1 - - 1.000 - - - - - -
52. CU681842.3 CU681842.3 2 1 - - - 1.000 - - - - -
53. CABZ01035647.1 CABZ01035647.1 5 1 - - - 1.000 - - - - -
54. spo11 ENSDARG00000013837 7 1 - - 1.000 - - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
55. si:ch211-241f4.1 si:ch211-241f4.1 2 1 - - - - 1.000 - - - -
56. NPY2R ENSDARG00000094763, ENSDARG00000112792 1 1 - - - 1.000 - - - - - neuropeptide Y receptor Y2 [Source:ZFIN;Acc:ZDB-GENE-040924-8]
57. rhol ENSDARG00000070666 0 1 - - - 1.000 - - - - - rhodopsin, like [Source:ZFIN;Acc:ZDB-GENE-070424-6]
58. pappab ENSDARG00000059858 11 1 - - - 1.000 - - - - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
59. CR356223.2 ENSDARG00000100655 4 1 - - - 1.000 - - - - -
60. si:dkey-91i10.7 si:dkey-91i10.7 9 1 - - 1.000 - - - - - -
61. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1 - - - 1.000 - - - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
62. def8_1 ENSDARG00000068208 1 1 - - 1.000 - - - - - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
63. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - 1.000 - - - - -
64. nr5a1a ENSDARG00000103176 12 1 - - - 1.000 - - - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
65. si:dkey-178e17.1 ENSDARG00000080000 4 1 - - - - 1.000 - - - - si:dkey-178e17.1 [Source:ZFIN;Acc:ZDB-GENE-081104-41]
66. ntrk3b ENSDARG00000086214 1 1 - - 1.000 - - - - - - neurotrophic tyrosine kinase, receptor, type 3b [Source:ZFIN;Acc:ZDB-GENE-010126-4]
67. DNM2 DNM2 2 1 - - 1.000 - - - - - -
68. mamdc2a ENSDARG00000098345 21 1 - - - 1.000 - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
69. lmbrd2a ENSDARG00000099566 15 1 - - - 1.000 - - - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
70. nsmfb ENSDARG00000101234 4 1 - - - 1.000 - - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
71. PATL2 PATL2 10 1 - - - 1.000 - - - - -
72. si:ch211-135l21.9 si:ch211-135l21.9 8 1 - - - 1.000 - - - - -
73. CABZ01011032.1 CABZ01011032.1 1 1 - - - 1.000 - - - - -
74. RAB31 0 1 - - - 1.000 - - - - - RAB31, member RAS oncogene family, transcript variant X1
75. si:ch211-278f21.4 si:ch211-278f21.4 0 1 - - - 1.000 - - - - -
76. il11b ENSDARG00000058557 17 1 - - - 1.000 - - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
77. HTRA3 ENSDARG00000010925 0 1 - - - 1.000 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
78. zgc:152698 32 1 - - 1.000 - - - - - - zgc:152698
79. zgc:175136 ENSDARG00000103024 4 1 - - - 1.000 - - - - - zgc:175136 [Source:ZFIN;Acc:ZDB-GENE-080204-122]
80. AKNA ENSDARG00000087110 39 1 - - - 1.000 - - - - - AT-hook transcription factor [Source:ZFIN;Acc:ZDB-GENE-091204-170]
81. FGFBP2 FGFBP2 16 1 - - - 1.000 - - - - -
82. si:ch73-44m9.1 ENSDARG00000077115 3 1 - - 1.000 - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
83. PEG3_13 PEG3_13 5 1 - - - 1.000 - - - - -
84. si:ch211-113a14.29_1 4 1 - - 1.000 - - - - - - si:ch211-113a14.29
85. si:ch211-71m22.3 ENSDARG00000079075 4 1 - - - - 1.000 - - - - si:ch211-71m22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-195]
86. cpo ENSDARG00000077688 1 1 - - - 1.000 - - - - - carboxypeptidase O [Source:ZFIN;Acc:ZDB-GENE-070619-6]
87. CELA1_1 CELA1_1 104 1 - - - 1.000 - - - - -
88. ghrh ENSDARG00000069481, ENSDARG00000111551 9 1 - - - 1.000 - - - - - growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
89. si:dkeyp-82a1.8 ENSDARG00000095539 6 1 - - - 1.000 - - - - - si:dkeyp-82a1.8 [Source:ZFIN;Acc:ZDB-GENE-081104-479]
90. si:dkeyp-66d7.4 si:dkeyp-66d7.4 2 1 - - 1.000 - - - - - -
91. TTC21A 0 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 21A, transcript variant X4
92. GPX2 ENSDARG00000089149 10 1 - - - 1.000 - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
93. HIST1H4F HIST1H4F 1 1 - - 1.000 - - - - - -
94. si:ch211-238p8.10 ENSDARG00000115284 0 1 - - - 1.000 - - - - - si:ch211-238p8.10 [Source:ZFIN;Acc:ZDB-GENE-091117-24]
95. buc ENSDARG00000096095 0 1 - - - 1.000 - - - - - bucky ball [Source:ZFIN;Acc:ZDB-GENE-070117-694]
96. si:dkey-149m13.5 ENSDARG00000094653 1 1 - - 1.000 - - - - - - si:dkey-149m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-74]
97. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - 1.000 - - - - - -
98. BX511182.1 BX511182.1 8 1 - - - 1.000 - - - - -
99. si:dkeyp-104f11.9 ENSDARG00000096715 81 1 - - 1.000 - - - - - - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
100. csrp1b ENSDARG00000030980 2 1 - - 1.000 - - - - - - cysteine and glycine-rich protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-252]

There are 248 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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