Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nr1d1

Gene Name Gene ID Reads Annotation
nr1d1 ENSDARG00000033160 3 nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]










Genes with expression patterns similar to nr1d1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr1d1 ENSDARG00000033160 3 3 - - 1.000 1.000 1.000 - - - - nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]
2. fip1l1a ENSDARG00000043328 7 1.782 - - 0.813 0.969 - - - - - FIP1 like 1a (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-8]
3. spo11 ENSDARG00000013837 7 1 - - 1.000 - - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
4. Metazoa_SRP_18 Metazoa_SRP_18 4 1 - - - 1.000 - - - - -
5. si:dkeyp-104f11.9 ENSDARG00000096715 81 1 - - 1.000 - - - - - - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
6. CACNG5 CACNG5 1 1 - - - 1.000 - - - - -
7. ZNF423 ENSDARG00000059707 11 1 - - - 1.000 - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
8. si:dkey-58f10.10 ENSDARG00000094284 4 1 - - - 1.000 - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
9. hes2.1 ENSDARG00000074897 10 1 - - 1.000 - - - - - - hes family bHLH transcription factor 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081104-104]
10. cep170b ENSDARG00000074636 4 1 - - - 1.000 - - - - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
11. irgq2 ENSDARG00000068657 4 1 - - - 1.000 - - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
12. si:dkey-267i17.2 si:dkey-267i17.2 0 1 - - - 1.000 - - - - -
13. TMC5 ENSDARG00000013252 22 1 - - 1.000 - - - - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
14. CABZ01011032.1 CABZ01011032.1 1 1 - - - 1.000 - - - - -
15. TTC21A 0 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 21A, transcript variant X4
16. si:ch211-238p8.10 ENSDARG00000115284 0 1 - - - 1.000 - - - - - si:ch211-238p8.10 [Source:ZFIN;Acc:ZDB-GENE-091117-24]
17. CR356223.2 ENSDARG00000100655 4 1 - - - 1.000 - - - - -
18. nr5a1a ENSDARG00000103176 12 1 - - - 1.000 - - - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
19. mvb12ba ENSDARG00000091619 18 1 - - - 1.000 - - - - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
20. HEPHL1 HEPHL1 309 1 - - - 1.000 - - - - -
21. si:ch211-145h19.2 7 1 - - - 1.000 - - - - - si:ch211-145h19.2
22. SNORA55 SNORA55 0 1 - - - 1.000 - - - - -
23. si:ch73-44m9.1 ENSDARG00000077115 3 1 - - 1.000 - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
24. si:dkey-27p18.6 4 1 - - - 1.000 - - - - - si:dkey-27p18.6, transcript variant X1
25. csrp1b ENSDARG00000030980 2 1 - - 1.000 - - - - - - cysteine and glycine-rich protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-252]
26. slc35f1 ENSDARG00000053003 0 1 - - - 1.000 - - - - - solute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
27. si:ch211-113a14.29_1 4 1 - - 1.000 - - - - - - si:ch211-113a14.29
28. ENSDARG00000063316 ENSDARG00000063316 4 1 - - - 1.000 - - - - -
29. si:ch211-71m22.3 ENSDARG00000079075 4 1 - - - - 1.000 - - - - si:ch211-71m22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-195]
30. vti1a ENSDARG00000045065 7 1 - - - 1.000 - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:ZFIN;Acc:ZDB-GENE-050809-135]
31. notchl ENSDARG00000088308 28 1 - - - - 1.000 - - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
32. CABZ01059406.1 ENSDARG00000088775 1 1 - - - 1.000 - - - - -
33. RAB31 0 1 - - - 1.000 - - - - - RAB31, member RAS oncogene family, transcript variant X1
34. CDR2_1 CDR2_1 8 1 - - - 1.000 - - - - -
35. CABZ01112401.1 CABZ01112401.1 0 1 - - - 1.000 - - - - -
36. erap2 ENSDARG00000098618 16 1 - - - 1.000 - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
37. kcnma1b 0 1 - - - 1.000 - - - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1b
38. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - 1.000 - - - - -
39. si:ch211-278f21.4 si:ch211-278f21.4 0 1 - - - 1.000 - - - - -
40. si:dkey-178e17.1 ENSDARG00000080000 4 1 - - - - 1.000 - - - - si:dkey-178e17.1 [Source:ZFIN;Acc:ZDB-GENE-081104-41]
41. si:ch73-67c22.3 si:ch73-67c22.3 30 1 - - - 1.000 - - - - -
42. RAP1GDS1 ENSDARG00000073741 0 1 - - - 1.000 - - - - - Rap1 GTPase-GDP dissociation stimulator 1 [Source:HGNC Symbol;Acc:HGNC:9859]
43. CCSER1 ENSDARG00000075919 16 1 - - - 1.000 - - - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
44. cyp46a4 cyp46a4 5 1 - - 1.000 - - - - - -
45. GPX2 ENSDARG00000089149 10 1 - - - 1.000 - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
46. sox8 sox8 109 1 - - - 1.000 - - - - -
47. pappab ENSDARG00000059858 11 1 - - - 1.000 - - - - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
48. si:ch211-112l17.3 si:ch211-112l17.3 8 1 - - - 1.000 - - - - -
49. rhol ENSDARG00000070666 0 1 - - - 1.000 - - - - - rhodopsin, like [Source:ZFIN;Acc:ZDB-GENE-070424-6]
50. buc ENSDARG00000096095 0 1 - - - 1.000 - - - - - bucky ball [Source:ZFIN;Acc:ZDB-GENE-070117-694]
51. si:ch211-262h13.6 si:ch211-262h13.6 0 1 - - - 1.000 - - - - -
52. CU681842.3 CU681842.3 2 1 - - - 1.000 - - - - -
53. si:dkeyp-13a3.6 3 1 - - - - 1.000 - - - - si:dkeyp-13a3.6
54. si:ch211-241f4.1 si:ch211-241f4.1 2 1 - - - - 1.000 - - - -
55. CU856140.1 CU856140.1 4316 1 - - - 1.000 - - - - -
56. vwf ENSDARG00000077231 5 1 - - - 1.000 - - - - - von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1]
57. snoU13 snoU13 2 1 - - - 1.000 - - - - -
58. agbl5 ENSDARG00000045900 2 1 - - - 1.000 - - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
59. CU179703.1 CU179703.1 5 1 - - - - 1.000 - - - -
60. elmod3 ENSDARG00000074742 6 1 - - - 1.000 - - - - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
61. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - 1.000 - - - - -
62. si:ch211-222j14.1 si:ch211-222j14.1 0 1 - - - 1.000 - - - - -
63. il11b ENSDARG00000058557 17 1 - - - 1.000 - - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
64. def8_1 ENSDARG00000068208 1 1 - - 1.000 - - - - - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
65. si:dkey-96n2.1 ENSDARG00000092172 0 1 - - - 1.000 - - - - - si:dkey-96n2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1759]
66. si:dkeyp-66d7.4 si:dkeyp-66d7.4 2 1 - - 1.000 - - - - - -
67. C11H3orf83_1 C11H3orf83_1 3 1 - - - 1.000 - - - - -
68. si:ch73-123f19.2 si:ch73-123f19.2 0 1 - - - 1.000 - - - - -
69. ABCC6 ABCC6 5 1 - - - 1.000 - - - - -
70. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - 1.000 - - - - - -
71. U6_21 U6_21 0 1 - - - 1.000 - - - - -
72. arhgap30 arhgap30 6 1 - - - 1.000 - - - - -
73. RIMS2 RIMS2 2 1 - - - 1.000 - - - - -
74. apoob ENSDARG00000026444, ENSDARG00000109942 4 1 - - - 1.000 - - - - - apolipoprotein O, b [Source:ZFIN;Acc:ZDB-GENE-041001-40]
75. zgc:175136 ENSDARG00000103024 4 1 - - - 1.000 - - - - - zgc:175136 [Source:ZFIN;Acc:ZDB-GENE-080204-122]
76. ADAMTS15_1 ADAMTS15_1 11 1 - - - 1.000 - - - - -
77. AKNA ENSDARG00000087110 39 1 - - - 1.000 - - - - - AT-hook transcription factor [Source:ZFIN;Acc:ZDB-GENE-091204-170]
78. si:dkeyp-82a1.8 ENSDARG00000095539 6 1 - - - 1.000 - - - - - si:dkeyp-82a1.8 [Source:ZFIN;Acc:ZDB-GENE-081104-479]
79. pcdh1a6 ENSDARG00000097170 6 1 - - - 1.000 - - - - - protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
80. kcnq2a ENSDARG00000075307 7 1 - - - 1.000 - - - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
81. FGFBP2 FGFBP2 16 1 - - - 1.000 - - - - -
82. HIST1H4F HIST1H4F 1 1 - - 1.000 - - - - - -
83. HTRA3 ENSDARG00000010925 0 1 - - - 1.000 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
84. CU855733.1 CU855733.1 2 1 - - 1.000 - - - - - -
85. CABZ01035647.1 CABZ01035647.1 5 1 - - - 1.000 - - - - -
86. si:dkey-238m4.4 ENSDARG00000093248 3 1 - - - 1.000 - - - - - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
87. ghrh ENSDARG00000069481, ENSDARG00000111551 9 1 - - - 1.000 - - - - - growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
88. si:rp71-36a1.1 ENSDARG00000095295 13 1 - - - 1.000 - - - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
89. si:ch211-187d1.1 si:ch211-187d1.1 4 1 - - 1.000 - - - - - -
90. si:zfos-44h1.1 si:zfos-44h1.1 1 1 - - - 1.000 - - - - -
91. nsmfb ENSDARG00000101234 4 1 - - - 1.000 - - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
92. ENSDARG00000062524 ENSDARG00000062524 1 1 - - 1.000 - - - - - -
93. pcdh2ab7 7 1 - - - 1.000 - - - - - protocadherin 2 alpha b 7
94. chia.3 ENSDARG00000009612 14 1 - - 1.000 - - - - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
95. si:dkey-91i10.7 si:dkey-91i10.7 9 1 - - 1.000 - - - - - -
96. fbxo36b ENSDARG00000039152 7 1 - - - 1.000 - - - - - F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
97. ANKRD34C 13 1 - - 1.000 - - - - - - ankyrin repeat domain 34C
98. PEG3_13 PEG3_13 5 1 - - - 1.000 - - - - -
99. GOLT1A ENSDARG00000088933 14 1 - - 1.000 - - - - - - golgi transport 1A [Source:ZFIN;Acc:ZDB-GENE-141212-320]
100. BX119910.15 BX119910.15 4 1 - - - 1.000 - - - - -

There are 248 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA