Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nr1d1

Gene Name Gene ID Reads Annotation
nr1d1 ENSDARG00000033160 3 nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]










Genes with expression patterns similar to nr1d1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr1d1 ENSDARG00000033160 3 3 - - 1.000 1.000 1.000 - - - - nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]
2. fip1l1a ENSDARG00000043328 7 1.782 - - 0.813 0.969 - - - - - FIP1 like 1a (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-8]
3. CU469509.3 CU469509.3 1 1 - - - 1.000 - - - - -
4. U6_21 U6_21 0 1 - - - 1.000 - - - - -
5. CR388416.2 CR388416.2 3 1 - - - 1.000 - - - - -
6. sox8 sox8 109 1 - - - 1.000 - - - - -
7. si:dkeyp-104f11.9 ENSDARG00000096715 81 1 - - 1.000 - - - - - - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
8. si:ch211-103n10.5 ENSDARG00000077504, ENSDARG00000116548 8 1 - - - 1.000 - - - - - si:ch211-103n10.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5155]
9. AKNA ENSDARG00000087110 39 1 - - - 1.000 - - - - - AT-hook transcription factor [Source:ZFIN;Acc:ZDB-GENE-091204-170]
10. si:ch211-187d1.1 si:ch211-187d1.1 4 1 - - 1.000 - - - - - -
11. vwf ENSDARG00000077231 5 1 - - - 1.000 - - - - - von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1]
12. BX465848.2 ENSDARG00000116920 6 1 - - - 1.000 - - - - -
13. si:ch211-262h13.6 si:ch211-262h13.6 0 1 - - - 1.000 - - - - -
14. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1 - - - 1.000 - - - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
15. si:dkeyp-13a3.6 3 1 - - - - 1.000 - - - - si:dkeyp-13a3.6
16. TRIM14_5 TRIM14_5 2 1 - - 1.000 - - - - - -
17. snoU13 snoU13 2 1 - - - 1.000 - - - - -
18. slc35f1 ENSDARG00000053003 0 1 - - - 1.000 - - - - - solute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
19. kcnq2a ENSDARG00000075307 7 1 - - - 1.000 - - - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
20. si:ch73-44m9.1 ENSDARG00000077115 3 1 - - 1.000 - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
21. pcdh1a6 ENSDARG00000097170 6 1 - - - 1.000 - - - - - protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
22. PATL2 PATL2 10 1 - - - 1.000 - - - - -
23. si:dkeyp-82a1.8 ENSDARG00000095539 6 1 - - - 1.000 - - - - - si:dkeyp-82a1.8 [Source:ZFIN;Acc:ZDB-GENE-081104-479]
24. si:dkey-91i10.7 si:dkey-91i10.7 9 1 - - 1.000 - - - - - -
25. crygm2f ENSDARG00000078134, ENSDARG00000112285 2 1 - - - 1.000 - - - - - crystallin, gamma M2f [Source:ZFIN;Acc:ZDB-GENE-080220-17]
26. si:ch211-145h19.2 7 1 - - - 1.000 - - - - - si:ch211-145h19.2
27. C11H3orf83_1 C11H3orf83_1 3 1 - - - 1.000 - - - - -
28. rhol ENSDARG00000070666 0 1 - - - 1.000 - - - - - rhodopsin, like [Source:ZFIN;Acc:ZDB-GENE-070424-6]
29. si:ch73-138e16.6 ENSDARG00000101044 2 1 - - 1.000 - - - - - - si:ch73-138e16.6 [Source:ZFIN;Acc:ZDB-GENE-070705-205]
30. RAB31 0 1 - - - 1.000 - - - - - RAB31, member RAS oncogene family, transcript variant X1
31. CACNG5 CACNG5 1 1 - - - 1.000 - - - - -
32. olfcg4 ENSDARG00000099773 1 1 - - - 1.000 - - - - - olfactory receptor C family, g4 [Source:ZFIN;Acc:ZDB-GENE-060503-66]
33. si:ch211-112l17.3 si:ch211-112l17.3 8 1 - - - 1.000 - - - - -
34. lmbrd2a ENSDARG00000099566 15 1 - - - 1.000 - - - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
35. CR356223.2 ENSDARG00000100655 4 1 - - - 1.000 - - - - -
36. TMC5 ENSDARG00000013252 22 1 - - 1.000 - - - - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
37. SNORA55 SNORA55 0 1 - - - 1.000 - - - - -
38. si:ch211-135l21.9 si:ch211-135l21.9 8 1 - - - 1.000 - - - - -
39. FGFBP2 FGFBP2 16 1 - - - 1.000 - - - - -
40. si:dkey-178e17.1 ENSDARG00000080000 4 1 - - - - 1.000 - - - - si:dkey-178e17.1 [Source:ZFIN;Acc:ZDB-GENE-081104-41]
41. si:ch73-67c22.3 si:ch73-67c22.3 30 1 - - - 1.000 - - - - -
42. zgc:152698 32 1 - - 1.000 - - - - - - zgc:152698
43. nsmfb ENSDARG00000101234 4 1 - - - 1.000 - - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
44. nr5a1a ENSDARG00000103176 12 1 - - - 1.000 - - - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
45. or110-2 ENSDARG00000091172 1 1 - - 1.000 - - - - - - odorant receptor, family D, subfamily 110, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-76]
46. bmpr2b ENSDARG00000020057 8 1 - - - 1.000 - - - - - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
47. CU856140.1 CU856140.1 4316 1 - - - 1.000 - - - - -
48. si:rp71-36a1.1 ENSDARG00000095295 13 1 - - - 1.000 - - - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
49. CABZ01112401.1 CABZ01112401.1 0 1 - - - 1.000 - - - - -
50. TTC21A 0 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 21A, transcript variant X4
51. si:dkey-27p18.6 4 1 - - - 1.000 - - - - - si:dkey-27p18.6, transcript variant X1
52. def8_1 ENSDARG00000068208 1 1 - - 1.000 - - - - - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
53. si:ch211-113a14.29_1 4 1 - - 1.000 - - - - - - si:ch211-113a14.29
54. buc ENSDARG00000096095 0 1 - - - 1.000 - - - - - bucky ball [Source:ZFIN;Acc:ZDB-GENE-070117-694]
55. ZNF423 ENSDARG00000059707 11 1 - - - 1.000 - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
56. mvb12ba ENSDARG00000091619 18 1 - - - 1.000 - - - - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
57. si:dkey-72l17.1 si:dkey-72l17.1 0 1 - - - 1.000 - - - - -
58. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - - 1.000 - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
59. BX119910.15 BX119910.15 4 1 - - - 1.000 - - - - -
60. RAP1GDS1 ENSDARG00000073741 0 1 - - - 1.000 - - - - - Rap1 GTPase-GDP dissociation stimulator 1 [Source:HGNC Symbol;Acc:HGNC:9859]
61. chia.3 ENSDARG00000009612 14 1 - - 1.000 - - - - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
62. crygmxl1 ENSDARG00000018797 7 1 - - - 1.000 - - - - - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
63. si:ch211-238p8.10 ENSDARG00000115284 0 1 - - - 1.000 - - - - - si:ch211-238p8.10 [Source:ZFIN;Acc:ZDB-GENE-091117-24]
64. fbxo36b ENSDARG00000039152 7 1 - - - 1.000 - - - - - F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
65. ntrk3b ENSDARG00000086214 1 1 - - 1.000 - - - - - - neurotrophic tyrosine kinase, receptor, type 3b [Source:ZFIN;Acc:ZDB-GENE-010126-4]
66. si:dkeyp-98a7.5_1 0 1 - - - 1.000 - - - - - si:dkeyp-98a7.5
67. si:dkey-238m4.4 ENSDARG00000093248 3 1 - - - 1.000 - - - - - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
68. NPY2R ENSDARG00000094763, ENSDARG00000112792 1 1 - - - 1.000 - - - - - neuropeptide Y receptor Y2 [Source:ZFIN;Acc:ZDB-GENE-040924-8]
69. TCERG1L ENSDARG00000109963 2 1 - - - 1.000 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
70. si:dkey-267i17.2 si:dkey-267i17.2 0 1 - - - 1.000 - - - - -
71. si:dkeyp-101e12.1 ENSDARG00000089794 0 1 - - - 1.000 - - - - - si:dkeyp-101e12.1 [Source:ZFIN;Acc:ZDB-GENE-091113-32]
72. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - 1.000 - - - - -
73. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - 1.000 - - - - - -
74. C6H16orf45 C6H16orf45 0 1 - - - 1.000 - - - - -
75. zgc:153311 ENSDARG00000015964 85 1 - - - 1.000 - - - - - zgc:153311 [Source:ZFIN;Acc:ZDB-GENE-060825-194]
76. plxnd1 ENSDARG00000086057 2 1 - - 1.000 - - - - - - plexin D1 [Source:ZFIN;Acc:ZDB-GENE-040426-1828]
77. si:dkey-96n2.1 ENSDARG00000092172 0 1 - - - 1.000 - - - - - si:dkey-96n2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1759]
78. CCSER1 ENSDARG00000075919 16 1 - - - 1.000 - - - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
79. cep170b ENSDARG00000074636 4 1 - - - 1.000 - - - - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
80. HIST1H4F HIST1H4F 1 1 - - 1.000 - - - - - -
81. si:ch211-241f4.1 si:ch211-241f4.1 2 1 - - - - 1.000 - - - -
82. si:ch211-222j14.1 si:ch211-222j14.1 0 1 - - - 1.000 - - - - -
83. CU179703.1 CU179703.1 5 1 - - - - 1.000 - - - -
84. abhd10a ENSDARG00000076435 3 1 - - - 1.000 - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
85. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - 1.000 - - - - -
86. CU681842.3 CU681842.3 2 1 - - - 1.000 - - - - -
87. Metazoa_SRP_18 Metazoa_SRP_18 4 1 - - - 1.000 - - - - -
88. HEPHL1 HEPHL1 309 1 - - - 1.000 - - - - -
89. ENSDARG00000089437 ENSDARG00000089437 0 1 - - - 1.000 - - - - -
90. si:ch73-92e20.2 si:ch73-92e20.2 2 1 - - - 1.000 - - - - -
91. CU855733.1 CU855733.1 2 1 - - 1.000 - - - - - -
92. pappab ENSDARG00000059858 11 1 - - - 1.000 - - - - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
93. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - 1.000 - - - - -
94. CABZ01035647.1 CABZ01035647.1 5 1 - - - 1.000 - - - - -
95. CDR2_1 CDR2_1 8 1 - - - 1.000 - - - - -
96. ghrh ENSDARG00000069481, ENSDARG00000111551 9 1 - - - 1.000 - - - - - growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
97. notchl ENSDARG00000088308 28 1 - - - - 1.000 - - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
98. GOLT1A ENSDARG00000088933 14 1 - - 1.000 - - - - - - golgi transport 1A [Source:ZFIN;Acc:ZDB-GENE-141212-320]
99. il11b ENSDARG00000058557 17 1 - - - 1.000 - - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
100. spo11 ENSDARG00000013837 7 1 - - 1.000 - - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]

There are 248 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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