Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nr1d1

Gene Name Gene ID Reads Annotation
nr1d1 ENSDARG00000033160 3 nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]










Genes with expression patterns similar to nr1d1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr1d1 ENSDARG00000033160 3 3 - - 1.000 1.000 1.000 - - - - nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]
2. fip1l1a ENSDARG00000043328 7 1.782 - - 0.813 0.969 - - - - - FIP1 like 1a (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-8]
3. CCSER1 ENSDARG00000075919 16 1 - - - 1.000 - - - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
4. erap2 ENSDARG00000098618 16 1 - - - 1.000 - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
5. zgc:152698 32 1 - - 1.000 - - - - - - zgc:152698
6. csrp1b ENSDARG00000030980 2 1 - - 1.000 - - - - - - cysteine and glycine-rich protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-252]
7. CU681842.3 CU681842.3 2 1 - - - 1.000 - - - - -
8. apoob ENSDARG00000026444, ENSDARG00000109942 4 1 - - - 1.000 - - - - - apolipoprotein O, b [Source:ZFIN;Acc:ZDB-GENE-041001-40]
9. CABZ01059406.1 ENSDARG00000088775 1 1 - - - 1.000 - - - - -
10. C11H3orf83_1 C11H3orf83_1 3 1 - - - 1.000 - - - - -
11. ENSDARG00000089437 ENSDARG00000089437 0 1 - - - 1.000 - - - - -
12. si:ch211-262h13.6 si:ch211-262h13.6 0 1 - - - 1.000 - - - - -
13. si:ch211-103n10.5 ENSDARG00000077504, ENSDARG00000116548 8 1 - - - 1.000 - - - - - si:ch211-103n10.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5155]
14. si:dkeyp-98a7.5_1 0 1 - - - 1.000 - - - - - si:dkeyp-98a7.5
15. CDR2_1 CDR2_1 8 1 - - - 1.000 - - - - -
16. CU855733.1 CU855733.1 2 1 - - 1.000 - - - - - -
17. HEPHL1 HEPHL1 309 1 - - - 1.000 - - - - -
18. GOLT1A ENSDARG00000088933 14 1 - - 1.000 - - - - - - golgi transport 1A [Source:ZFIN;Acc:ZDB-GENE-141212-320]
19. kcnma1b 0 1 - - - 1.000 - - - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1b
20. si:dkey-72l17.1 si:dkey-72l17.1 0 1 - - - 1.000 - - - - -
21. si:rp71-36a1.1 ENSDARG00000095295 13 1 - - - 1.000 - - - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
22. chia.3 ENSDARG00000009612 14 1 - - 1.000 - - - - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
23. plxnd1 ENSDARG00000086057 2 1 - - 1.000 - - - - - - plexin D1 [Source:ZFIN;Acc:ZDB-GENE-040426-1828]
24. ntrk3b ENSDARG00000086214 1 1 - - 1.000 - - - - - - neurotrophic tyrosine kinase, receptor, type 3b [Source:ZFIN;Acc:ZDB-GENE-010126-4]
25. pcdh2ab7 7 1 - - - 1.000 - - - - - protocadherin 2 alpha b 7
26. si:dkey-238m4.4 ENSDARG00000093248 3 1 - - - 1.000 - - - - - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
27. si:ch211-112l17.3 si:ch211-112l17.3 8 1 - - - 1.000 - - - - -
28. si:ch73-44m9.1 ENSDARG00000077115 3 1 - - 1.000 - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
29. ADAMTS15_1 ADAMTS15_1 11 1 - - - 1.000 - - - - -
30. arhgap30 arhgap30 6 1 - - - 1.000 - - - - -
31. si:dkey-106m10.5 si:dkey-106m10.5 10 1 - - - 1.000 - - - - -
32. ugt5g2 ENSDARG00000043901, ENSDARG00000112752 1 1 - - - 1.000 - - - - - UDP glucuronosyltransferase 5 family, polypeptide G2 [Source:ZFIN;Acc:ZDB-GENE-081028-66]
33. sox8 sox8 109 1 - - - 1.000 - - - - -
34. si:ch73-123f19.2 si:ch73-123f19.2 0 1 - - - 1.000 - - - - -
35. abhd10a ENSDARG00000076435 3 1 - - - 1.000 - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
36. olfcg4 ENSDARG00000099773 1 1 - - - 1.000 - - - - - olfactory receptor C family, g4 [Source:ZFIN;Acc:ZDB-GENE-060503-66]
37. DNM2 DNM2 2 1 - - 1.000 - - - - - -
38. edn3b ENSDARG00000086669 8 1 - - - 1.000 - - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
39. si:dkeyp-66d7.4 si:dkeyp-66d7.4 2 1 - - 1.000 - - - - - -
40. FGFBP2 FGFBP2 16 1 - - - 1.000 - - - - -
41. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - - 1.000 - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
42. CU179703.1 CU179703.1 5 1 - - - - 1.000 - - - -
43. CR356223.2 ENSDARG00000100655 4 1 - - - 1.000 - - - - -
44. zgc:153311 ENSDARG00000015964 85 1 - - - 1.000 - - - - - zgc:153311 [Source:ZFIN;Acc:ZDB-GENE-060825-194]
45. si:ch211-278f21.4 si:ch211-278f21.4 0 1 - - - 1.000 - - - - -
46. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - 1.000 - - - - -
47. RIMS2 RIMS2 2 1 - - - 1.000 - - - - -
48. si:dkeyp-82a1.8 ENSDARG00000095539 6 1 - - - 1.000 - - - - - si:dkeyp-82a1.8 [Source:ZFIN;Acc:ZDB-GENE-081104-479]
49. irgq2 ENSDARG00000068657 4 1 - - - 1.000 - - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
50. or110-2 ENSDARG00000091172 1 1 - - 1.000 - - - - - - odorant receptor, family D, subfamily 110, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-76]
51. ABCC6 ABCC6 5 1 - - - 1.000 - - - - -
52. HTRA3 ENSDARG00000010925 0 1 - - - 1.000 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
53. U6_21 U6_21 0 1 - - - 1.000 - - - - -
54. hes2.1 ENSDARG00000074897 10 1 - - 1.000 - - - - - - hes family bHLH transcription factor 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081104-104]
55. ENSDARG00000063316 ENSDARG00000063316 4 1 - - - 1.000 - - - - -
56. si:ch73-67c22.3 si:ch73-67c22.3 30 1 - - - 1.000 - - - - -
57. si:ch211-241f4.1 si:ch211-241f4.1 2 1 - - - - 1.000 - - - -
58. CABZ01035647.1 CABZ01035647.1 5 1 - - - 1.000 - - - - -
59. si:dkey-267i17.2 si:dkey-267i17.2 0 1 - - - 1.000 - - - - -
60. lmbrd2a ENSDARG00000099566 15 1 - - - 1.000 - - - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
61. si:dkey-149m13.5 ENSDARG00000094653 1 1 - - 1.000 - - - - - - si:dkey-149m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-74]
62. C6H16orf45 C6H16orf45 0 1 - - - 1.000 - - - - -
63. snoU13 snoU13 2 1 - - - 1.000 - - - - -
64. si:ch211-113a14.29_1 4 1 - - 1.000 - - - - - - si:ch211-113a14.29
65. il11b ENSDARG00000058557 17 1 - - - 1.000 - - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
66. Metazoa_SRP_18 Metazoa_SRP_18 4 1 - - - 1.000 - - - - -
67. TCERG1L ENSDARG00000109963 2 1 - - - 1.000 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
68. vti1a ENSDARG00000045065 7 1 - - - 1.000 - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:ZFIN;Acc:ZDB-GENE-050809-135]
69. CU469509.3 CU469509.3 1 1 - - - 1.000 - - - - -
70. RAB31 0 1 - - - 1.000 - - - - - RAB31, member RAS oncogene family, transcript variant X1
71. PEG3_13 PEG3_13 5 1 - - - 1.000 - - - - -
72. si:dkeyp-101e12.1 ENSDARG00000089794 0 1 - - - 1.000 - - - - - si:dkeyp-101e12.1 [Source:ZFIN;Acc:ZDB-GENE-091113-32]
73. ZNF423 ENSDARG00000059707 11 1 - - - 1.000 - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
74. TRIM14_5 TRIM14_5 2 1 - - 1.000 - - - - - -
75. notchl ENSDARG00000088308 28 1 - - - - 1.000 - - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
76. mamdc2a ENSDARG00000098345 21 1 - - - 1.000 - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
77. elmod3 ENSDARG00000074742 6 1 - - - 1.000 - - - - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
78. cpo ENSDARG00000077688 1 1 - - - 1.000 - - - - - carboxypeptidase O [Source:ZFIN;Acc:ZDB-GENE-070619-6]
79. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1 - - - 1.000 - - - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
80. ANKRD34C 13 1 - - 1.000 - - - - - - ankyrin repeat domain 34C
81. cep170b ENSDARG00000074636 4 1 - - - 1.000 - - - - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
82. mvb12ba ENSDARG00000091619 18 1 - - - 1.000 - - - - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
83. crygmxl1 ENSDARG00000018797 7 1 - - - 1.000 - - - - - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
84. agbl5 ENSDARG00000045900 2 1 - - - 1.000 - - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
85. si:dkey-178e17.1 ENSDARG00000080000 4 1 - - - - 1.000 - - - - si:dkey-178e17.1 [Source:ZFIN;Acc:ZDB-GENE-081104-41]
86. fbxo36b ENSDARG00000039152 7 1 - - - 1.000 - - - - - F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
87. si:dkey-58f10.10 ENSDARG00000094284 4 1 - - - 1.000 - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
88. si:dkey-27p18.6 4 1 - - - 1.000 - - - - - si:dkey-27p18.6, transcript variant X1
89. si:ch73-92e20.2 si:ch73-92e20.2 2 1 - - - 1.000 - - - - -
90. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - 1.000 - - - - - -
91. si:ch73-138e16.6 ENSDARG00000101044 2 1 - - 1.000 - - - - - - si:ch73-138e16.6 [Source:ZFIN;Acc:ZDB-GENE-070705-205]
92. si:dkey-96n2.1 ENSDARG00000092172 0 1 - - - 1.000 - - - - - si:dkey-96n2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1759]
93. CABZ01011032.1 CABZ01011032.1 1 1 - - - 1.000 - - - - -
94. CABZ01112401.1 CABZ01112401.1 0 1 - - - 1.000 - - - - -
95. nsmfb ENSDARG00000101234 4 1 - - - 1.000 - - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
96. def8_1 ENSDARG00000068208 1 1 - - 1.000 - - - - - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
97. cyp46a4 cyp46a4 5 1 - - 1.000 - - - - - -
98. TMC5 ENSDARG00000013252 22 1 - - 1.000 - - - - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
99. TTC21A 0 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 21A, transcript variant X4
100. si:dkeyp-104f11.9 ENSDARG00000096715 81 1 - - 1.000 - - - - - - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]

There are 248 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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