Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nptxrb

Gene Name Gene ID Reads Annotation
nptxrb ENSDARG00000053375, ENSDARG00000109291 27 neuronal pentraxin receptor b [Source:ZFIN;Acc:ZDB-GENE-050208-595]










Genes with expression patterns similar to nptxrb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nptxrb ENSDARG00000053375, ENSDARG00000109291 27 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neuronal pentraxin receptor b [Source:ZFIN;Acc:ZDB-GENE-050208-595]
2. si:dkey-115f9.3 7 1.81 - - - 0.937 - - 0.873 - - si:dkey-115f9.3, transcript variant X2
3. NPPC_1 NPPC_1 11 1.702 - - - - - 0.829 0.873 - -
4. si:ch211-261n9.2 si:ch211-261n9.2 4 1.678 - - - 0.937 - - - - 0.741
5. CNTNAP1 ENSDARG00000074524 73 1.64 - - 0.794 - - - 0.846 - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
6. BX571949.1 BX571949.1 293 1.625 - - - 0.716 - - 0.909 - -
7. xkr8.1 ENSDARG00000004498 18 1.585 - - - - 0.712 - 0.873 - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
8. LRIF1_1 LRIF1_1 228 1.577 - - - - - 0.704 0.873 - -
9. PIAS1 PIAS1 13 1.573 - - - 0.700 - - 0.873 - -
10. RPS6KL1 ENSDARG00000079024 22 1.489 - - - 0.751 - - 0.738 - - ribosomal protein S6 kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-111020-10]
11. mir219-2 129 1.465 - - - - - 0.706 0.759 - - microRNA 219-2
12. si:dkey-26c10.5 ENSDARG00000088023 9 1.432 - - - - - - 0.724 - 0.708 si:dkey-26c10.5 [Source:ZFIN;Acc:ZDB-GENE-060607-13]
13. CABZ01090980.1 CABZ01090980.1 6 0.992 - - - 0.992 - - - - -
14. CR388002.2 CR388002.2 3 0.981 - - - 0.981 - - - - -
15. hes2.2 ENSDARG00000068168 197 0.98 - - - - - - 0.980 - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
16. CABZ01029822.1 ENSDARG00000086931 1654 0.967 - - - - - - 0.967 - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
17. CU138508.1 CU138508.1 77 0.947 - - - - - 0.947 - - -
18. SNORA81 SNORA81 47 0.945 - - - 0.945 - - - - -
19. ANKS1A ANKS1A 138 0.944 - - - - - - 0.944 - -
20. fshr ENSDARG00000071494, ENSDARG00000112820 3 0.937 - - - 0.937 - - - - - follicle stimulating hormone receptor [Source:ZFIN;Acc:ZDB-GENE-020423-5]
21. SCAMP5 SCAMP5 19 0.937 - - - 0.937 - - - - -
22. CR388129.2 CR388129.2 1 0.937 - - - 0.937 - - - - -
23. slc5a12 ENSDARG00000005004 15 0.937 - - - 0.937 - - - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
24. zgc:153921_1 ENSDARG00000020738, ENSDARG00000038405 19 0.937 - - - 0.937 - - - - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
25. ADAD2 ENSDARG00000105626 6 0.937 - - - 0.937 - - - - - adenosine deaminase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-130530-788]
26. gphb5 ENSDARG00000027472 8 0.937 - - - 0.937 - - - - - glycoprotein hormone beta 5 [Source:ZFIN;Acc:ZDB-GENE-090319-4]
27. si:dkey-54j5.1 si:dkey-54j5.1 4 0.937 - - - 0.937 - - - - -
28. si:ch73-340m8.2 ENSDARG00000040258 2 0.937 - - - 0.937 - - - - - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]
29. si:dkey-260c8.5 si:dkey-260c8.5 8 0.937 - - - 0.937 - - - - -
30. MUC5AC_2 MUC5AC_2 5 0.937 - - - 0.937 - - - - -
31. pcdh1gb9 ENSDARG00000088475 71 0.937 - - - - - - 0.937 - - protocadherin 1 gamma b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-18]
32. BX664622.1 ENSDARG00000101754 39 0.937 - - - 0.937 - - - - -
33. si:dkey-163m14.6 5 0.937 - - - 0.937 - - - - - si:dkey-163m14.6
34. BX682234.3 BX682234.3 7 0.937 - - - 0.937 - - - - -
35. si:ch211-198k9.10 si:ch211-198k9.10 47 0.933 - - - 0.933 - - - - -
36. st8sia1_1 ENSDARG00000098221 16 0.93 - - - - - - 0.930 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
37. nup214 ENSDARG00000016212 163 0.926 - - - - - - 0.926 - - nucleoporin 214 [Source:ZFIN;Acc:ZDB-GENE-110203-3]
38. gria4a ENSDARG00000037496 88 0.918 - - - - - - 0.918 - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
39. SBK1 SBK1 154 0.917 - - - - - - 0.917 - -
40. syt4 ENSDARG00000036505 421 0.916 - - - - - - 0.916 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
41. IL4I1 IL4I1 4 0.915 - - - 0.915 - - - - -
42. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 0.911 - - - - - - 0.911 - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
43. si:dkey-47k16.3 si:dkey-47k16.3 17 0.91 - - - 0.910 - - - - -
44. st6galnac5a ENSDARG00000039220 76 0.909 - - - - - - 0.909 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
45. lingo1a ENSDARG00000034165 179 0.902 - - - - - - 0.902 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
46. evx2 ENSDARG00000059255 317 0.896 - - - - - - 0.896 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
47. ENSDARG00000090222 ENSDARG00000090222 402 0.895 - - - - - - 0.895 - -
48. ncoa1 ENSDARG00000018257 133 0.895 - - - 0.895 - - - - - nuclear receptor coactivator 1 [Source:ZFIN;Acc:ZDB-GENE-041001-175]
49. snapc1a ENSDARG00000029569 25 0.894 - - - 0.894 - - - - - small nuclear RNA activating complex, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1031]
50. GPR137B GPR137B 50 0.891 - - - - - - 0.891 - -
51. SLC28A2 SLC28A2 21 0.89 - - - 0.890 - - - - -
52. nrxn2a ENSDARG00000061454 291 0.886 - - - - - - 0.886 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
53. NAV1 NAV1 23 0.88 - - - 0.880 - - - - -
54. npffr1l2 ENSDARG00000062631 127 0.877 - - - - - - 0.877 - - neuropeptide FF receptor 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-060526-110]
55. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 0.876 - - - - - - 0.876 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
56. P4HTM ENSDARG00000075209 16 0.873 - - - - - - 0.873 - - prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) [Source:ZFIN;Acc:ZDB-GENE-110131-7]
57. olfm3a ENSDARG00000071493, ENSDARG00000110039 46 0.873 - - - - - - 0.873 - - olfactomedin 3a [Source:ZFIN;Acc:ZDB-GENE-080219-11]
58. BX936298.1 ENSDARG00000092607 2 0.873 - - - - - - 0.873 - -
59. CABZ01067743.1 CABZ01067743.1 48 0.873 - - - - - - 0.873 - -
60. si:dkey-122c11.4 si:dkey-122c11.4 13 0.873 - - - - - - 0.873 - -
61. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 0.873 - - - - - - 0.873 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
62. cyp27a1.2 ENSDARG00000069186 10 0.873 - - - - - - 0.873 - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 2 [Source:ZFIN;Acc:ZDB-GENE-081104-511]
63. GPR153 ENSDARG00000087601 48 0.873 - - - - - - 0.873 - - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
64. C18H19orf47 C18H19orf47 44 0.873 - - - - - - 0.873 - -
65. fbxl3b ENSDARG00000021882 58 0.873 - - - - - - 0.873 - - F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
66. si:ch211-253d24.2 si:ch211-253d24.2 12 0.873 - - - - - - 0.873 - -
67. TENM2 ENSDARG00000037122 48 0.873 - - - - - - 0.873 - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
68. si:ch211-267e7.22 si:ch211-267e7.22 34 0.873 - - - - - - 0.873 - -
69. si:ch211-198o12.4 ENSDARG00000068098 0 0.873 - - - - - - 0.873 - - si:ch211-198o12.4 [Source:ZFIN;Acc:ZDB-GENE-060503-300]
70. CU184872.1 CU184872.1 15 0.873 - - - - - - 0.873 - -
71. c6ast3 ENSDARG00000024503 2 0.873 - - - - - - 0.873 - - six-cysteine containing astacin protease 3 [Source:ZFIN;Acc:ZDB-GENE-050320-99]
72. wsb2 ENSDARG00000058608 11 0.873 - - - - - - 0.873 - - WD repeat and SOCS box containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-26]
73. si:ch73-286h23.3 si:ch73-286h23.3 0 0.873 - - - - - - 0.873 - -
74. asap3 ENSDARG00000021896 19 0.873 - - - - - - 0.873 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
75. si:ch211-262n1.5 12 0.873 - - - - - - 0.873 - - si:ch211-262n1.5
76. rab11bb_1 ENSDARG00000090086 7 0.873 - - - - - - 0.873 - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
77. BTBD17 BTBD17 53 0.873 - - - - - - 0.873 - -
78. nrg2b ENSDARG00000086585 100 0.873 - - - - - - 0.873 - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
79. slc1a1 ENSDARG00000020212 104 0.873 - - - - - - 0.873 - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
80. RNASEH2C_1 RNASEH2C_1 10 0.873 - - - - - - 0.873 - -
81. mir124-6 64 0.873 - - - - - - 0.873 - - microRNA 124-6
82. si:dkey-27n6.9 51 0.873 - - - - - - 0.873 - - si:dkey-27n6.9, transcript variant X4
83. c1galt1a ENSDARG00000055585, ENSDARG00000112143 53 0.873 - - - - - - 0.873 - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a [Source:ZFIN;Acc:ZDB-GENE-061013-303]
84. SMARCA4 ENSDARG00000104339 48 0.873 - - - - - - 0.873 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
85. CABZ01084273.1 CABZ01084273.1 16 0.873 - - - - - - 0.873 - -
86. mir92b 95 0.873 - - - - - - 0.873 - - microRNA 92b
87. rbfox3l rbfox3l 34 0.873 - - - - - - 0.873 - -
88. mtf2 ENSDARG00000005590 82 0.873 - - - - - - 0.873 - - metal response element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-060512-94]
89. si:dkey-53f14.2 si:dkey-53f14.2 4 0.873 - - - - - - 0.873 - -
90. cntnap5b ENSDARG00000075189 16 0.873 - - - - - - 0.873 - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
91. tbxas1 ENSDARG00000002249 55 0.873 - - - - - - 0.873 - - thromboxane A synthase 1 (platelet) [Source:ZFIN;Acc:ZDB-GENE-030131-8805]
92. SLC47A1 ENSDARG00000046012 3 0.873 - - - - - - 0.873 - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
93. pag1 ENSDARG00000055875 21 0.873 - - - - - - 0.873 - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
94. si:ch73-111m19.2 ENSDARG00000003077 43 0.873 - - - - - - 0.873 - - si:ch73-111m19.2 [Source:ZFIN;Acc:ZDB-GENE-130603-13]
95. CU571169.4 CU571169.4 12 0.873 - - - - - - 0.873 - -
96. cacna1g ENSDARG00000089913 19 0.873 - - - - - - 0.873 - - calcium channel, voltage-dependent, T type, alpha 1G subunit [Source:ZFIN;Acc:ZDB-GENE-090514-2]
97. golim4a ENSDARG00000100977, ENSDARG00000106760, ENSDARG00000113393 144 0.873 - - - - - - 0.873 - - golgi integral membrane protein 4a [Source:ZFIN;Acc:ZDB-GENE-041026-2]
98. si:dkey-266f7.10 ENSDARG00000086613 7 0.873 - - - - - - 0.873 - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
99. hivep3a ENSDARG00000075928 17 0.873 - - - - - - 0.873 - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
100. LRFN2 118 0.873 - - - - - - 0.873 - - leucine rich repeat and fibronectin type III domain containing 2

There are 614 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA