Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nptx2b

Gene Name Gene ID Reads Annotation
nptx2b ENSDARG00000045164 5 neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]










Genes with expression patterns similar to nptx2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nptx2b ENSDARG00000045164 5 7 - 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
2. sftpbb ENSDARG00000067566 13 2.927 - - 1.000 - - - 1.000 0.927 - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
3. cx52.9 ENSDARG00000086453 7 2.91 - 0.910 - - 1.000 - 1.000 - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
4. zar1 ENSDARG00000019706 8 2.843 - 0.910 - - - - 1.000 0.933 - zygote arrest 1 [Source:ZFIN;Acc:ZDB-GENE-030818-1]
5. si:dkey-26c10.5 ENSDARG00000088023 9 2.685 - - 1.000 - - - 0.844 0.841 - si:dkey-26c10.5 [Source:ZFIN;Acc:ZDB-GENE-060607-13]
6. si:ch211-176m18.1 si:ch211-176m18.1 27 2 - - 1.000 - - - 1.000 - -
7. si:dkey-115f9.3 7 2 - - - - 1.000 - 1.000 - - si:dkey-115f9.3, transcript variant X2
8. nlgn1 ENSDARG00000077710 72 2 - 1.000 - - - - 1.000 - - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]
9. sstr3 ENSDARG00000014477 14 2 - - - - 1.000 - 1.000 - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
10. pcdh1a6 ENSDARG00000097170 6 2 - - - - 1.000 - 1.000 - - protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
11. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 2 - - - - 1.000 - 1.000 - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
12. ft2 ENSDARG00000109567 5 2 - - 1.000 - 1.000 - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
13. CR848025.1 ENSDARG00000100501 35 2 - - - - 1.000 - 1.000 - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
14. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 2 - - - - 1.000 - 1.000 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
15. ush1g ush1g 0 2 - - - - 1.000 - 1.000 - -
16. SYNPR ENSDARG00000037587 20 2 - - 1.000 - 1.000 - - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
17. cacna1aa ENSDARG00000037905 4 2 - - - - 1.000 - 1.000 - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
18. wnt3a ENSDARG00000058822 5 1.979 - 0.979 - - 1.000 - - - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
19. taf4b ENSDARG00000075732 3 1.91 - 0.910 - - 1.000 - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
20. si:ch211-262n1.5 12 1.91 - 0.910 - - - - 1.000 - - si:ch211-262n1.5
21. si:dkey-27n6.9 51 1.881 - 0.881 - - - - 1.000 - - si:dkey-27n6.9, transcript variant X4
22. FDXACB1 ENSDARG00000095750 98 1.86 - 0.860 - - - - 1.000 - - ferredoxin-fold anticodon binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8403]
23. prdm11 ENSDARG00000074468 2 1.837 - - 1.000 - - - - - 0.837 PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
24. si:ch211-269m17.1 si:ch211-269m17.1 1 1.837 - - - - - - 1.000 - 0.837
25. U4_1 U4_1 2 1.837 - - - - 1.000 - - - 0.837
26. fam19a1 7 1.837 - - - - 1.000 - - - 0.837 family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
27. EPS15L1 EPS15L1 22 1.824 - 0.889 - - - - - - 0.935
28. NRG3 NRG3 22 1.821 - - - - 0.821 - 1.000 - -
29. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1.811 - 0.811 1.000 - - - - - -
30. grik4 ENSDARG00000026753 22 1.8 - - 0.800 - - - 1.000 - - glutamate receptor, ionotropic, kainate 4 [Source:ZFIN;Acc:ZDB-GENE-070821-5]
31. CR759816.1 ENSDARG00000098977 27 1.788 - - 1.000 - - - - 0.788 -
32. si:ch211-254p10.3 si:ch211-254p10.3 5 1.785 - 0.948 - - - - - - 0.837
33. zgc:100951 ENSDARG00000111442 24 1.763 - - - - - - 1.000 - 0.763 zgc:100951 [Source:ZFIN;Acc:ZDB-GENE-040801-141]
34. si:ch211-113a14.17 15 1.747 - 0.910 - - - - - - 0.837 si:ch211-113a14.17
35. zgc:171318 zgc:171318 42 1.747 - 0.747 - - 1.000 - - - -
36. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1.745 - - - - 0.854 - - 0.891 - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
37. CT573248.1 ENSDARG00000074029 10 1.743 - - 0.743 - - - 1.000 - -
38. evx2 ENSDARG00000059255 317 1.718 - - - 0.729 - - 0.989 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
39. klhl4 ENSDARG00000016531 47 1.716 - - - - - - 1.000 0.716 - kelch-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-070410-63]
40. CR392001.1 ENSDARG00000095478 15 1.709 - - 0.709 - - - 1.000 - -
41. CCDC180 ENSDARG00000032372 21 1.67 - 0.910 - - - - - 0.760 - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
42. CABZ01050100.1 CABZ01050100.1 17 1.668 - - 0.729 - - - - 0.939 -
43. WNK2 ENSDARG00000104989 429 1.658 - 0.882 - - - - 0.776 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
44. rps8b ENSDARG00000057368 68 1.633 - 0.910 - - - - 0.723 - - ribosomal protein S8b [Source:ZFIN;Acc:ZDB-GENE-050522-202]
45. tmem150c ENSDARG00000069590 94 1.629 - 0.791 - - - - 0.838 - - transmembrane protein 150C [Source:ZFIN;Acc:ZDB-GENE-090112-5]
46. HRASLS ENSDARG00000100021 16 1.596 - 0.737 - - - - 0.859 - - HRAS-like suppressor [Source:ZFIN;Acc:ZDB-GENE-040718-330]
47. RBPMS ENSDARG00000099396 61 1.553 - - - 0.709 - - 0.844 - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
48. gucy2f ENSDARG00000025504 6 1.525 - - 0.772 0.753 - - - - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
49. tacr3a ENSDARG00000075112 1 1.496 - - 0.743 0.753 - - - - - tachykinin receptor 3a [Source:ZFIN;Acc:ZDB-GENE-090312-106]
50. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 1.49 - 0.703 - - - - 0.787 - - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
51. PDXP ENSDARG00000109823 195 1.48 - 0.722 - - - - 0.758 - - pyridoxal (pyridoxine, vitamin B6) phosphatase [Source:ZFIN;Acc:ZDB-GENE-080723-69]
52. si:ch211-133l5.5 si:ch211-133l5.5 123 1 - - 1.000 - - - - - -
53. gnat1 ENSDARG00000044199 251 1 - - 1.000 - - - - - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011128-11]
54. snoU13 snoU13 2 1 - - 1.000 - - - - - -
55. cnga3b ENSDARG00000012297 2 1 - - 1.000 - - - - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
56. KSR1_1 KSR1_1 1 1 - - 1.000 - - - - - -
57. zgc:113293 ENSDARG00000038271 0 1 - - 1.000 - - - - - - zgc:113293 [Source:ZFIN;Acc:ZDB-GENE-050417-453]
58. lzts1 ENSDARG00000075565 23 1 - - - - - - 1.000 - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
59. CABZ01089223.1 CABZ01089223.1 0 1 - - - - 1.000 - - - -
60. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 1 - - - - - - 1.000 - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
61. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - - - - 1.000 - - - -
62. WASF3 WASF3 1 1 - - 1.000 - - - - - -
63. mir20b 0 1 - - - - - - 1.000 - - microRNA 20b
64. si:ch211-253b18.3 si:ch211-253b18.3 4 1 - - - - 1.000 - - - -
65. LPHN2_1 LPHN2_1 3 1 - - - - - - 1.000 - -
66. SSBP2 ENSDARG00000099727 22 1 - - - - - - 1.000 - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
67. phf20a ENSDARG00000002750 90 1 - - - - - - 1.000 - - PHD finger protein 20, a [Source:ZFIN;Acc:ZDB-GENE-070912-270]
68. zgc:174268 ENSDARG00000076807 250 1 - - - - - - 1.000 - - zgc:174268 [Source:ZFIN;Acc:ZDB-GENE-080219-18]
69. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - - - - 1.000 - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
70. U1_21 U1_21 0 1 - - - - 1.000 - - - -
71. CABZ01019904.1 ENSDARG00000104193 6 1 - - - - 1.000 - - - -
72. fam45a ENSDARG00000062965, ENSDARG00000115900 14 1 - - 1.000 - - - - - - family with sequence similarity 45, member A [Source:ZFIN;Acc:ZDB-GENE-030131-3548]
73. gng2 ENSDARG00000056831 81 1 - - - - - - 1.000 - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
74. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 1 - - - - - - 1.000 - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
75. slc2a5 ENSDARG00000077875 5 1 - - - - - - 1.000 - - solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
76. iffo1a ENSDARG00000062976 5 1 - - - - 1.000 - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
77. VASH1 ENSDARG00000092716 33 1 - - - - 1.000 - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
78. LRIF1_1 LRIF1_1 228 1 - - - - - - 1.000 - -
79. xkr8.1 ENSDARG00000004498 18 1 - - - - - - 1.000 - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
80. ASPG ENSDARG00000052942 1 1 - - - - 1.000 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
81. pcdh2ab6 ENSDARG00000091043 1 1 - - 1.000 - - - - - - protocadherin 2 alpha b 6 [Source:ZFIN;Acc:ZDB-GENE-041118-5]
82. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - - - 1.000 - - - - si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
83. si:ch211-263p13.7 ENSDARG00000077622 2 1 - - - - - - 1.000 - - si:ch211-263p13.7 [Source:ZFIN;Acc:ZDB-GENE-091204-336]
84. vwc2 ENSDARG00000076495 22 1 - - - - - - 1.000 - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
85. arhgap17a ENSDARG00000020488, ENSDARG00000113457 11 1 - - 1.000 - - - - - - Rho GTPase activating protein 17a [Source:ZFIN;Acc:ZDB-GENE-050417-56]
86. mei4 ENSDARG00000043912 10 1 - - - - - - 1.000 - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
87. wnt8a ENSDARG00000052910, ENSDARG00000078507 0 1 - - - - 1.000 - - - - wingless-type MMTV integration site family, member 8a [Source:ZFIN;Acc:ZDB-GENE-980526-332]
88. si:rp71-31c2.1 si:rp71-31c2.1 1 1 - - - - 1.000 - - - -
89. RCVRN_1 RCVRN_1 46 1 - - 1.000 - - - - - -
90. si:ch211-132b12.7 ENSDARG00000068374 30 1 - - - - - - 1.000 - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
91. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - 1.000 - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
92. gpr173 ENSDARG00000042922 238 1 - - - - - - 1.000 - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
93. CLSPN_1 CLSPN_1 59 1 - - - - - - 1.000 - -
94. si:ch211-223g7.2 ENSDARG00000103265 1 1 - - 1.000 - - - - - - si:ch211-223g7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-153]
95. NSUN6 ENSDARG00000103478 29 1 - - - - - - 1.000 - - NOL1/NOP2/Sun domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080808-8]
96. abcc13 ENSDARG00000062519 2 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
97. lhx8a ENSDARG00000002330 25 1 - - - - - - 1.000 - - LIM homeobox 8a [Source:ZFIN;Acc:ZDB-GENE-031008-2]
98. si:ch211-119d14.3 ENSDARG00000075332 12 1 - - - - - - 1.000 - - si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
99. si:dkey-189d19.2 si:dkey-189d19.2 45 1 - - - - - - 1.000 - -
100. si:dkey-211f1.2 si:dkey-211f1.2 11 1 - - - - - - 1.000 - -

There are 1431 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA