Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nptx1l

Gene Name Gene ID Reads Annotation
nptx1l ENSDARG00000074671 569 neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]










Genes with expression patterns similar to nptx1l

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nptx1l ENSDARG00000074671 569 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
2. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.622 0.828 0.920 - - - 0.977 0.897 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
3. SV2B SV2B 208 3.462 0.857 0.882 - - - 0.907 0.816 - -
4. calb1 ENSDARG00000031598 252 3.437 0.771 0.918 - - - 0.858 0.890 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
5. rap2ip rap2ip 681 3.413 0.805 0.822 - - - 0.843 0.943 - -
6. TUSC5 TUSC5 1436 3.409 0.864 0.771 - - - 0.983 0.791 - -
7. slc1a2b ENSDARG00000102453 3136 3.399 0.870 0.817 - - - 0.859 0.853 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
8. KCNAB2 KCNAB2 129 3.398 0.814 0.918 - - - 0.903 0.763 - -
9. snap25a ENSDARG00000020609 4537 3.345 0.794 0.812 - - - 0.889 0.850 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
10. stmn2a ENSDARG00000033234 2272 3.345 0.820 0.738 - - - 0.944 0.843 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
11. zic4 ENSDARG00000031307 1228 3.331 0.806 0.810 - - - 0.897 0.818 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
12. stx1b ENSDARG00000000503 2724 3.312 0.780 0.861 - - - 0.788 0.883 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
13. TUBB2A TUBB2A 142 3.305 0.776 0.918 - - - 0.855 0.756 - -
14. TUBB8P7_1 TUBB8P7_1 2722 3.29 0.758 0.731 - - - 0.878 0.923 - -
15. amph ENSDARG00000007663 599 3.288 0.719 0.882 - - - 0.852 0.835 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
16. zic1 ENSDARG00000015567 2520 3.283 0.761 0.787 - - - 0.930 0.805 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
17. si:ch211-11c15.3 si:ch211-11c15.3 1279 3.281 0.843 0.712 - - - 0.929 0.797 - -
18. MAP1A MAP1A 847 3.278 0.824 0.782 - - - 0.898 0.774 - -
19. runx3 ENSDARG00000052826 247 3.255 0.764 0.905 0.701 - - 0.885 - - - runt-related transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-000605-2]
20. scn8aa ENSDARG00000005775 792 3.218 0.796 0.815 - - - 0.802 0.805 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
21. gap43 ENSDARG00000099744 4114 3.213 0.782 0.715 - - - 0.856 0.860 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
22. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 3.212 0.749 0.742 - - - 0.917 0.804 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
23. rbfox3 rbfox3 1443 3.182 0.716 0.899 - - - 0.712 0.855 - -
24. stxbp5a ENSDARG00000002656 318 2.985 0.711 0.758 - - - 0.739 0.777 - - syntaxin binding protein 5a (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-041001-161]
25. atp2b3b ENSDARG00000023445 1424 2.798 0.879 - - - - 0.979 0.940 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
26. rdh12 ENSDARG00000018069 396 2.777 - - - - - 0.865 0.917 0.995 - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
27. syt11a ENSDARG00000057913 1145 2.757 - 0.921 - - - 0.905 0.931 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
28. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.744 0.903 - - - - 0.943 0.898 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
29. cacng3b ENSDARG00000076401 91 2.725 0.895 0.918 - - - - 0.912 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
30. lhx5 ENSDARG00000057936 785 2.719 0.854 - - - - 0.973 0.892 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
31. atpv0e2 ENSDARG00000059057 585 2.702 0.873 - - - - 0.898 0.931 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
32. st8sia2 ENSDARG00000018788 2183 2.702 - - - - - 0.827 0.939 0.936 - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
33. htr3a ENSDARG00000089212 51 2.692 0.890 0.918 - - - 0.884 - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
34. sez6l2 ENSDARG00000076052 360 2.688 - 0.822 - - - 0.970 0.896 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
35. nrn1a ENSDARG00000071860 1311 2.682 0.820 - - - - 0.917 0.945 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
36. pcsk1nl ENSDARG00000076170 1232 2.674 - 0.807 - - - 0.944 0.923 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
37. cers6 ENSDARG00000053583 247 2.672 0.844 - - - - 0.914 0.914 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
38. MAP6 MAP6 643 2.65 - 0.940 - - - 0.793 0.917 - -
39. slc17a6b ENSDARG00000041150 823 2.645 - 0.918 - - - 0.914 0.813 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
40. ksr2 ENSDARG00000094526 134 2.636 - 0.868 - - - 0.912 0.856 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
41. si:dkey-245p14.4 ENSDARG00000070320 418 2.63 0.847 0.844 - - - 0.939 - - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
42. stmn1b ENSDARG00000033655 9491 2.612 0.723 - - - - 0.978 0.911 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
43. dpysl4 ENSDARG00000103490 534 2.609 0.818 - - - - 0.871 0.920 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
44. HSPA4L ENSDARG00000053544 363 2.609 0.855 0.860 - - - - 0.894 - - heat shock protein 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-2412]
45. necap1 ENSDARG00000020798 612 2.607 0.760 - - - - 0.901 0.946 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
46. gabra5 ENSDARG00000070730 156 2.606 0.774 - - - - 0.902 0.930 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
47. CT025910.1 CT025910.1 143 2.605 - 0.918 0.756 - - 0.931 - - -
48. atl1 ENSDARG00000060481 251 2.589 0.895 - - - - 0.950 0.744 - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
49. spock2 ENSDARG00000075393 791 2.588 0.776 - - - - 0.934 0.878 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
50. eno2 ENSDARG00000014287 2162 2.588 0.747 - - - - 0.895 0.946 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
51. FUT9 FUT9 91 2.587 0.791 0.918 - - - - 0.878 - -
52. rtn1b ENSDARG00000021143 1682 2.584 - 0.782 - - - 0.919 0.883 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
53. C7H4orf48 C7H4orf48 1455 2.573 0.744 - - - - 0.929 0.900 - -
54. PPFIA3 ENSDARG00000077053 310 2.57 0.790 - - - - 0.830 0.950 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
55. zgc:113307 ENSDARG00000044894 17 2.557 0.791 0.918 - - - 0.848 - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
56. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.556 - 0.826 - - - 0.813 0.917 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
57. sox2 ENSDARG00000070913 2763 2.554 - 0.733 - - - 0.871 0.950 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
58. neflb ENSDARG00000012426 298 2.547 - 0.918 - - - 0.704 0.925 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
59. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.546 0.713 - - - - 0.918 0.915 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
60. si:ch73-21g5.7 ENSDARG00000093156 9412 2.534 - 0.737 - - - 0.878 0.919 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
61. C21H5orf24 C21H5orf24 333 2.528 0.880 - 0.803 - - - 0.845 - -
62. adcyap1b ENSDARG00000027740 1539 2.524 0.842 - - - - 0.891 0.791 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
63. mdkb ENSDARG00000020708 5393 2.523 0.793 - - - - 0.961 0.769 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
64. adam23a ENSDARG00000062323 580 2.522 - 0.711 - - - 0.881 0.930 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
65. CLDN20 26 2.522 0.791 0.918 - - - 0.813 - - - claudin 20, transcript variant X2
66. slc1a3a ENSDARG00000104431 9888 2.521 0.744 - - - - 0.888 0.889 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
67. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.518 - 0.830 - - - 0.797 0.891 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
68. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.517 0.776 - - - - 0.934 0.807 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
69. scn2b ENSDARG00000101713 796 2.512 0.720 0.882 - - - - 0.910 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
70. slc32a1 ENSDARG00000059775 1092 2.51 - 0.762 - - - 0.899 0.849 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
71. cadm3 ENSDARG00000057013 1545 2.51 0.841 - - - - 0.869 0.800 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
72. CABZ01065506.1 CABZ01065506.1 204 2.509 0.791 - - - - 0.861 0.857 - -
73. zic2a ENSDARG00000015554 2860 2.509 0.837 - - - - - 0.835 0.837 - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
74. scrt2 ENSDARG00000056175 4331 2.508 - 0.841 - - - 0.886 0.781 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
75. tuba2 ENSDARG00000045014 1490 2.506 0.775 - - - - 0.906 0.825 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
76. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.502 0.770 - - - - 0.890 0.842 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
77. nmnat2 ENSDARG00000004580 370 2.5 0.858 - - - - 0.826 0.816 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
78. zic5 ENSDARG00000016022 1034 2.5 0.840 - - - - 0.861 0.799 - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
79. lrrc4.1 ENSDARG00000069402 323 2.499 - 0.757 - - - 0.895 0.847 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
80. zic3 ENSDARG00000071497 1448 2.498 0.785 - - - - 0.911 0.802 - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
81. hcfc1b ENSDARG00000012519 3633 2.494 - - - - - 0.850 0.715 0.929 - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
82. nrsn1 ENSDARG00000111235 123 2.492 - 0.881 - - - 0.750 0.861 - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
83. cbln1 ENSDARG00000057296 165 2.49 0.799 - - - - 0.874 0.817 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
84. fam219ab ENSDARG00000013813 591 2.487 - 0.918 - - - 0.719 0.850 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
85. gpr146 ENSDARG00000059610 810 2.482 0.775 - - - - 0.722 - 0.985 - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
86. sh3gl2 sh3gl2 1305 2.479 0.809 - - - - 0.864 0.806 - -
87. dtnbb ENSDARG00000013020 280 2.477 0.799 0.722 - - - 0.956 - - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
88. MCTP1 MCTP1 219 2.473 - 0.839 - - - 0.832 0.802 - -
89. vsnl1a ENSDARG00000023228 1584 2.472 - 0.743 - - - 0.943 0.786 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
90. kif1ab ENSDARG00000062024 794 2.469 - 0.726 - - - 0.876 0.867 - - kinesin family member 1Ab [Source:ZFIN;Acc:ZDB-GENE-070912-480]
91. syt3 ENSDARG00000075830 430 2.466 0.831 - - - - 0.795 0.840 - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
92. pou4f2 ENSDARG00000069737 451 2.463 0.881 0.712 - - - 0.870 - - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
93. pou4f1 ENSDARG00000005559 821 2.462 0.789 - - - - 0.776 0.897 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
94. hdac8 ENSDARG00000003021, ENSDARG00000105159 1729 2.451 - - 0.729 - - - 0.818 0.904 - histone deacetylase 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2772]
95. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.447 - - - - - 0.824 0.709 0.914 - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
96. pnoca ENSDARG00000025024 467 2.444 0.771 - - - - 0.938 0.735 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
97. BX470131.1 BX470131.1 86 2.437 0.791 - - - - 0.758 0.888 - -
98. nkx1.2lb ENSDARG00000099427 220 2.433 - 0.797 - - - 0.897 0.739 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
99. add2 ENSDARG00000074581 1402 2.429 0.768 - - - - 0.795 0.866 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
100. nova1 ENSDARG00000020178 4129 2.418 - 0.735 - - - 0.850 0.833 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]

There are 2749 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA