Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for npm1b

Gene Name Gene ID Reads Annotation
npm1b ENSDARG00000037675 5448 nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]










Genes with expression patterns similar to npm1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. npm1b ENSDARG00000037675 5448 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
2. plp1a ENSDARG00000103732 3544 3.554 0.760 0.988 0.875 - - 0.931 - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
3. tdg tdg 3269 3.374 0.774 - 0.879 - 0.845 0.876 - - -
4. CABZ01072954.1 CABZ01072954.1 2330 3.294 0.800 - 0.872 - - 0.907 0.715 - -
5. wu:fb17g07 wu:fb17g07 10567 3.214 0.707 - 0.907 - - - 0.849 - 0.751
6. tuba1c ENSDARG00000055216 8384 3.179 0.764 - 0.874 - - 0.836 - - 0.705 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
7. hnrnpub ENSDARG00000004735 16496 3.174 0.729 - - - - 0.869 0.776 - 0.800 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
8. hmgb3a ENSDARG00000056725 15668 3.144 0.733 - - - - 0.869 0.722 - 0.820 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
9. vdac1 ENSDARG00000045132 8051 3.122 0.711 - 0.812 - - 0.804 0.795 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
10. ZFHX3 ENSDARG00000103057 7759 3.043 0.774 - - - 0.723 0.840 - 0.706 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
11. nova2 ENSDARG00000017673 7685 3.038 0.735 - 0.798 - 0.725 0.780 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
12. tle2 5014 3.001 0.713 - - 0.759 - 0.758 0.771 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
13. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.979 - - 0.701 0.770 - - 0.793 - 0.715 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
14. cnn3b ENSDARG00000029856 4807 2.628 - 0.988 - - 0.842 - 0.798 - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
15. fscn1a ENSDARG00000059680 3999 2.623 - - - - - 0.919 0.871 0.833 - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
16. khsrp ENSDARG00000026489 15738 2.586 0.853 - - - - 0.917 0.816 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
17. sumo3a ENSDARG00000028119 13447 2.543 - - - 0.734 - 0.938 0.871 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
18. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.541 0.834 - - - - 0.927 0.780 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
19. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 2.537 - 0.989 0.844 - - - 0.704 - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
20. dbx1a ENSDARG00000086393 3161 2.537 - - 0.880 - 0.906 0.751 - - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
21. polb ENSDARG00000003749 2049 2.53 - - 0.873 - 0.822 0.835 - - - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
22. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 2.493 0.795 - - - - 0.898 0.800 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
23. scrt2 ENSDARG00000056175 4331 2.478 0.757 - - - 0.841 0.880 - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
24. si:ch211-251b21.1 ENSDARG00000007275 15724 2.471 - 0.988 0.777 - - 0.706 - - - si:ch211-251b21.1 [Source:ZFIN;Acc:ZDB-GENE-060809-5]
25. fam60al 2846 2.466 - - - 0.724 - 0.918 - - 0.824 family with sequence similarity 60, member A, like
26. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 2.435 - 0.965 - - - 0.714 - - 0.756 protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
27. mad2l1 ENSDARG00000004713 3398 2.426 - - 0.844 - - 0.879 0.703 - - MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
28. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.423 0.744 - - - 0.812 0.867 - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
29. smarce1 ENSDARG00000016871 9628 2.418 - - 0.795 - - 0.839 0.784 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
30. lmnb2 ENSDARG00000101624 11304 2.418 - 0.912 - 0.718 0.788 - - - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
31. tcea1 ENSDARG00000003531 2912 2.401 - - - - 0.823 0.738 0.840 - - transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
32. mllt11 ENSDARG00000071026 2518 2.384 0.734 - - - - 0.877 - 0.773 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
33. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.381 - - - - 0.765 0.907 0.709 - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
34. hoxa9b ENSDARG00000056819 3081 2.374 0.812 - - - - 0.811 0.751 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
35. h3f3a 66671 2.367 0.729 - - - - - 0.835 0.803 - H3 histone, family 3A, transcript variant X1
36. dpysl3 ENSDARG00000002587 4381 2.367 0.798 - - - 0.822 0.747 - - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
37. ptbp2b ENSDARG00000015901 2458 2.359 - - - - - 0.916 0.743 - 0.700 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
38. znf865 ENSDARG00000036698 15532 2.358 - - - - - 0.740 0.821 - 0.797 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
39. tuba2 ENSDARG00000045014 1490 2.352 0.708 - - - - 0.912 - 0.732 - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
40. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.342 - - - - 0.768 0.838 0.736 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
41. flrt3 ENSDARG00000076895 3516 2.31 - - - - 0.703 0.848 0.759 - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
42. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.31 - - 0.772 - - 0.803 - - 0.735 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
43. uba1 ENSDARG00000037559 11579 2.305 0.766 - - - - 0.801 0.738 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
44. tox ENSDARG00000032317 9126 2.302 - - 0.850 - - 0.749 - - 0.703 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
45. tshz1 ENSDARG00000005026 1948 2.301 0.768 - - - - 0.804 0.729 - - teashirt zinc finger homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030820-3]
46. si:dkey-256i11.1 si:dkey-256i11.1 3373 2.3 - - 0.854 - - 0.728 - - 0.718
47. sf1 ENSDARG00000008188 5142 2.297 - - - 0.735 - 0.842 - - 0.720 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
48. wfikkn2a ENSDARG00000013460 859 2.29 - - - - 0.831 0.756 - 0.703 - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
49. sox2 ENSDARG00000070913 2763 2.287 0.719 - - 0.726 - 0.842 - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
50. nxf1 ENSDARG00000055076 3251 2.279 - - - - - 0.869 0.705 0.705 - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
51. ctnnd2b ENSDARG00000003779 964 2.277 0.706 - - 0.729 0.842 - - - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
52. prrt1 ENSDARG00000062208 368 2.272 0.762 - - - - 0.810 - 0.700 - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
53. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 2.271 - - - - 0.818 0.727 0.726 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
54. kdm1a ENSDARG00000060679 6152 2.271 0.798 - - 0.709 - - 0.764 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
55. ezh2 ENSDARG00000010571 3273 2.268 - - - 0.710 0.824 - 0.734 - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
56. ssbp4 ENSDARG00000056483 10196 2.265 - - - 0.748 - - 0.795 0.722 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
57. nrarpb ENSDARG00000018958 6225 2.253 - - - 0.724 - 0.828 - - 0.701 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
58. u2af1 ENSDARG00000015325 3217 2.253 0.771 - - 0.711 - - 0.771 - - U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
59. clta ENSDARG00000045618, ENSDARG00000115484 11767 2.247 - - 0.709 - - 0.794 0.744 - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
60. h2afva ENSDARG00000068820 16427 2.242 - - 0.752 0.731 - - 0.759 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
61. sap30bp ENSDARG00000031261 1348 2.241 - - - - - 0.772 0.734 0.735 - SAP30 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-457]
62. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.239 0.729 - - - - 0.730 - 0.780 - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
63. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 2.236 0.721 - - - - 0.800 0.715 - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
64. pbx4 ENSDARG00000052150 35676 2.236 0.755 - - - 0.778 - 0.703 - - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
65. TMEM57 TMEM57 260 2.235 - - - - - 0.823 - 0.707 0.705
66. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.23 0.725 - - - - - - 0.774 0.731 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
67. smarcd1 ENSDARG00000019004 6028 2.23 - - - - - 0.776 0.718 - 0.736 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
68. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.216 - - - - - 0.720 0.796 0.700 - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
69. MKI67 ENSDARG00000091150 11038 2.211 0.702 - 0.764 - - - 0.745 - - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
70. foxk2 ENSDARG00000030583 2982 2.197 - - - - - 0.709 0.776 0.712 - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
71. slc29a1a ENSDARG00000101289 2074 2.17 0.748 - - - - 0.719 - 0.703 - solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
72. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.151 0.722 - - - - 0.729 - - 0.700 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
73. tmem35 ENSDARG00000052567 5685 2.129 0.719 - - - - 0.701 - - 0.709 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
74. mapre1b ENSDARG00000002659 9119 2.124 - - - - 0.720 - - 0.702 0.702 microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
75. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 1.909 - 0.983 - - - 0.926 - - - eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
76. sf3b1 ENSDARG00000056138 5785 1.848 - 0.983 - - - - - - 0.865 splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
77. cd99l2 ENSDARG00000056722 5036 1.848 - - 0.910 - - 0.938 - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
78. ube2v1 ENSDARG00000041875 5739 1.832 - 0.986 0.846 - - - - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
79. ap2b1 ENSDARG00000035152 2912 1.812 - 0.989 - - - 0.823 - - - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
80. myo9al1 myo9al1 1194 1.812 - 0.991 - - 0.821 - - - -
81. arrdc3b ENSDARG00000036028 3157 1.804 - 0.938 - - - 0.866 - - - arrestin domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-040912-182]
82. cnot11 ENSDARG00000068596 829 1.785 - 0.988 - - - 0.797 - - - CCR4-NOT transcription complex, subunit 11 [Source:ZFIN;Acc:ZDB-GENE-030131-8068]
83. elavl1 11672 1.782 - 0.979 - - - 0.803 - - - ELAV like RNA binding protein 1, transcript variant X3
84. hoxa5a ENSDARG00000102501 1667 1.777 - 0.987 - - - 0.790 - - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
85. bambia ENSDARG00000055381 2922 1.773 - 0.960 - - 0.813 - - - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
86. ogfr ENSDARG00000037837 1001 1.767 - 0.989 - - - 0.778 - - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
87. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.767 - - 0.833 - - 0.934 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
88. ppp6r3 ENSDARG00000013379 2912 1.766 - - 0.872 - 0.894 - - - - protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
89. rab5aa ENSDARG00000018602 8947 1.758 - 0.977 0.781 - - - - - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
90. abcb7 ENSDARG00000062795 1404 1.755 - 0.988 - - - 0.767 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
91. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.753 0.761 0.992 - - - - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
92. xylt1 ENSDARG00000061248 2357 1.752 - - 0.867 - - 0.885 - - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
93. glyr1 ENSDARG00000099213 6906 1.751 - 0.967 - - - - - 0.784 - glyoxylate reductase 1 homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-041121-5]
94. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.747 - 0.969 0.778 - - - - - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
95. tra2a ENSDARG00000007863 4449 1.746 - 0.983 - - - 0.763 - - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
96. zgc:91860 ENSDARG00000041599, ENSDARG00000110489 669 1.739 - - 0.837 - - 0.902 - - - zgc:91860 [Source:ZFIN;Acc:ZDB-GENE-040704-34]
97. rbms3 ENSDARG00000044574 2514 1.739 - - - - - 0.877 0.862 - - RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
98. csnk1a1_1 ENSDARG00000052674, ENSDARG00000112077 5195 1.731 - 0.978 - - - 0.753 - - - casein kinase 1, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-020419-19]
99. pkib ENSDARG00000053110 527 1.717 - - 0.843 - - 0.874 - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
100. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.716 - - - - - 0.921 - - 0.795 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]

There are 2581 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA