Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for npm1a

Gene Name Gene ID Reads Annotation
npm1a ENSDARG00000014329, ENSDARG00000113199 31910 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]










Genes with expression patterns similar to npm1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
2. hmga2 ENSDARG00000069912 20402 2.418 - - - 0.738 - 0.737 0.943 - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
3. nop58 ENSDARG00000104353 8497 2.416 - - - - - 0.744 0.847 - 0.825 NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
4. fbl ENSDARG00000053912 5891 2.382 - 0.884 0.743 - - - - - 0.755 fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
5. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.328 - - 0.794 - 0.700 - - - 0.834 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
6. HNRNPAB HNRNPAB 22267 2.32 - 0.864 - - - - - 0.722 0.734
7. gtpbp4 ENSDARG00000018961 5323 2.293 - - - - - 0.706 0.858 - 0.729 GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
8. lypla2 ENSDARG00000053656 8971 2.293 - - 0.711 - - - 0.819 - 0.763 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
9. eif3ba ENSDARG00000059654 22960 2.291 - - 0.772 - - 0.790 - - 0.729 eukaryotic translation initiation factor 3, subunit Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2748]
10. si:dkeyp-44a8.2 ENSDARG00000092493 8308 2.287 - - - 0.755 - - 0.783 - 0.749 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
11. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.72 - 0.869 - - - - - - 0.851 cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
12. nanos1 ENSDARG00000109337 2494 1.707 - 0.873 - - - - 0.834 - - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
13. parp1 ENSDARG00000019529 6787 1.704 - - - 0.936 - - - - 0.768 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
14. ncl ENSDARG00000002710 16951 1.701 - - - - - 0.852 - - 0.849 nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
15. cfl1 ENSDARG00000021124 78399 1.69 - 0.827 - - - - 0.863 - - cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
16. nt5dc2 ENSDARG00000059646 3878 1.687 - 0.850 - - - - 0.837 - - 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
17. foxp1b ENSDARG00000014181 2594 1.674 - - - - - - 0.868 - 0.806 forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
18. hccsa hccsa 869 1.67 - 0.872 - - - - 0.798 - -
19. nop16 ENSDARG00000044402 3645 1.651 - - - - - 0.755 0.896 - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
20. surf6 ENSDARG00000035427 1695 1.65 - 0.877 - - - - 0.773 - - surfeit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1333]
21. si:ch211-270n8.4 87 1.628 - - - - - 0.777 0.851 - - si:ch211-270n8.4
22. prpsap2 ENSDARG00000019326 1463 1.627 - - - - - - 0.823 - 0.804 phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2077]
23. stag1b ENSDARG00000062137 1814 1.626 - 0.871 - - - - - - 0.755 stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]
24. arhgap1 ENSDARG00000024324 6904 1.624 - - - 0.761 - - - - 0.863 Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
25. puf60a ENSDARG00000032175 5618 1.613 - - - - - - 0.829 - 0.784 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
26. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.612 - 0.871 - - - - - - 0.741 D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
27. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 1.609 - 0.863 - - - - - - 0.746 serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
28. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.606 - 0.853 - - - - - - 0.753 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
29. cox6b1 ENSDARG00000045230 1819 1.603 - - - - - 0.792 0.811 - - cytochrome c oxidase subunit 6B1 [Source:ZFIN;Acc:ZDB-GENE-040718-448]
30. rbm25 rbm25 3629 1.599 - - - - - - 0.770 - 0.829
31. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 1.599 0.709 0.890 - - - - - - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
32. ppap2b ppap2b 2900 1.594 - - - - - 0.752 0.842 - -
33. ddx5 ENSDARG00000038068 35302 1.592 - 0.828 - - - - - 0.764 - DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
34. PHLPP1 ENSDARG00000078694 2466 1.59 - 0.871 - - - 0.719 - - - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
35. crlf1a ENSDARG00000024365 222 1.588 - - - - - 0.758 0.830 - - cytokine receptor-like factor 1a [Source:ZFIN;Acc:ZDB-GENE-040718-397]
36. bmpr2a ENSDARG00000011941 2972 1.587 - - - - - - 0.874 - 0.713 bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
37. si:dkey-261h17.1 ENSDARG00000095268 11403 1.586 - - - - - 0.738 0.848 - - si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]
38. nexn ENSDARG00000057317 10972 1.585 0.701 0.884 - - - - - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
39. med10 ENSDARG00000070623 5134 1.585 - 0.874 - - - - - - 0.711 mediator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-070117-2423]
40. cpe ENSDARG00000055874, ENSDARG00000116033 2981 1.582 - 0.871 - - - - - - 0.711 carboxypeptidase E [Source:ZFIN;Acc:ZDB-GENE-090313-68]
41. timm10 ENSDARG00000069116 4459 1.579 - - - - - 0.779 0.800 - - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
42. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.579 - - - - - - 0.857 - 0.722 eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
43. rbm14a ENSDARG00000012723, ENSDARG00000114603 3802 1.577 - - - - - - 0.793 - 0.784 RNA binding motif protein 14a [Source:ZFIN;Acc:ZDB-GENE-050522-496]
44. EIF4G1 EIF4G1 19676 1.576 - - - - - 0.796 - - 0.780
45. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 1.576 - 0.873 - - - - 0.703 - - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
46. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.572 - - - - - - 0.859 - 0.713 CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
47. lmo2 ENSDARG00000095019 1098 1.568 - - - - - 0.759 0.809 - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
48. C8H9orf116 C8H9orf116 379 1.568 - - - - - 0.761 0.807 - -
49. cdk2 ENSDARG00000026577 2835 1.565 - - - - - - 0.831 - 0.734 cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
50. sub1b ENSDARG00000007720, ENSDARG00000112010 2258 1.565 - - - - - - 0.859 - 0.706 SUB1 homolog, transcriptional regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-209]
51. pum1 ENSDARG00000099256 5017 1.559 - - - - - - 0.818 - 0.741 pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
52. mycn ENSDARG00000006837 1616 1.558 - - - - - 0.824 - - 0.734 MYCN proto-oncogene, bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-020711-1]
53. mrps2 ENSDARG00000103198 2410 1.555 - - - - - 0.721 0.834 - - mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
54. xpo7 ENSDARG00000005540, ENSDARG00000110221 4566 1.548 - - - - - - 0.811 - 0.737 exportin 7 [Source:ZFIN;Acc:ZDB-GENE-060628-2]
55. STARD7 ENSDARG00000074858 889 1.548 - - - - - 0.714 0.834 - - StAR-related lipid transfer (START) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-2310]
56. kif11 ENSDARG00000010948 4973 1.539 - - - - - - - 0.712 0.827 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
57. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.532 - - - - - - 0.705 - 0.827 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
58. Sep-06 Sep-06 5465 1.529 - - - - - - 0.772 - 0.757
59. nxf1 ENSDARG00000055076 3251 1.529 - - - - - - 0.747 - 0.782 nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
60. stmn1a ENSDARG00000004169 21169 1.527 - - - - - - 0.769 - 0.758 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
61. tspan2 tspan2 948 1.526 - - - - - - 0.819 - 0.707
62. hmp19 2554 1.524 - - - 0.757 - - - - 0.767 HMP19 protein
63. nop56 ENSDARG00000012820 15231 1.522 - - - 0.738 - 0.784 - - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
64. cdk6 ENSDARG00000070228 1778 1.521 - - - - - - 0.777 - 0.744 cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
65. nme2b.2 ENSDARG00000099420 70588 1.517 0.709 0.808 - - - - - - - NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
66. snrpd3l ENSDARG00000076283 7655 1.516 - - - - - - 0.737 - 0.779 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
67. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 1.514 - 0.805 - - 0.709 - - - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
68. srcap ENSDARG00000005236 1740 1.513 - - - - - - 0.779 - 0.734 Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
69. setb ENSDARG00000003920 21788 1.511 - - - - 0.770 - 0.741 - - SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
70. eif3m ENSDARG00000013931 8117 1.51 - - 0.798 - - - 0.712 - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
71. mcm4 ENSDARG00000040041 7971 1.51 - 0.807 - - - - 0.703 - - minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
72. dnmt3b dnmt3b 2522 1.508 - - - - - - 0.760 - 0.748
73. UTP20 ENSDARG00000099280 1672 1.505 - - 0.717 - - - - - 0.788 UTP20 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-080225-38]
74. snrpc ENSDARG00000009871 9567 1.505 - - - - - - 0.732 - 0.773 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
75. gatad1 ENSDARG00000027612 1824 1.502 - - - 0.757 - - 0.745 - - GATA zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050629-1]
76. atp5f1 16797 1.499 0.758 - 0.741 - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
77. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 1.498 - - - - - - 0.721 - 0.777 N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
78. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.497 - - 0.741 - - - 0.756 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
79. ppiaa ENSDARG00000009212 290634 1.495 0.760 - - - - - - 0.735 - peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
80. hibadhb ENSDARG00000007959 4858 1.495 - 0.738 - - - - 0.757 - - 3-hydroxyisobutyrate dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-1582]
81. tnpo2 ENSDARG00000038239 2469 1.493 - - - - - - 0.771 - 0.722 transportin 2 (importin 3, karyopherin beta 2b) [Source:ZFIN;Acc:ZDB-GENE-040822-16]
82. rps26 ENSDARG00000037071 40061 1.491 0.753 - - - - 0.738 - - - ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-030131-8606]
83. ezh2 ENSDARG00000010571 3273 1.491 - - - - - - 0.705 - 0.786 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
84. cox6b2 ENSDARG00000037860 33134 1.49 - - - - - 0.784 0.706 - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
85. aip ENSDARG00000104437 3574 1.49 - - - - - - 0.776 - 0.714 aryl hydrocarbon receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-6735]
86. psmb7 ENSDARG00000037962 11542 1.488 - - - - - - 0.735 - 0.753 proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
87. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.488 - - - - - - 0.744 - 0.744 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
88. tbl3 ENSDARG00000052344 1530 1.487 - - 0.701 - - - 0.786 - - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
89. sp4 ENSDARG00000005186 2904 1.487 - - - - - - 0.756 - 0.731 sp4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-031202-3]
90. nucks1b ENSDARG00000012777 4468 1.486 - - - - - 0.715 0.771 - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
91. BX950186.2 BX950186.2 1267 1.484 - - - - - 0.740 0.744 - -
92. si:ch211-207j7.2 ENSDARG00000090793 316 1.484 - - - - - 0.717 0.767 - - si:ch211-207j7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-232]
93. snrpb ENSDARG00000011125 11729 1.481 - - 0.724 - - - 0.757 - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
94. C1H7orf55 C1H7orf55 2552 1.48 - - - - - - 0.778 - 0.702
95. mccc2 ENSDARG00000017571 5635 1.477 - - 0.730 - - - 0.747 - - methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
96. hdac1 ENSDARG00000015427 19804 1.477 - - - - - - - 0.712 0.765 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
97. sumo3a ENSDARG00000028119 13447 1.477 - - - - - - 0.711 - 0.766 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
98. si:dkey-238c7.12 si:dkey-238c7.12 6600 1.477 - - - - - 0.768 - - 0.709
99. nat10 ENSDARG00000054259 1310 1.476 - - - - - 0.706 0.770 - - N-acetyltransferase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1543]
100. clic5b_1 ENSDARG00000070584 149 1.474 - - - - - 0.705 0.769 - - chloride intracellular channel 5b [Source:ZFIN;Acc:ZDB-GENE-040426-2542]

There are 1430 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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