Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nphp3

Gene Name Gene ID Reads Annotation
nphp3 ENSDARG00000078261 110 nephronophthisis 3 [Source:ZFIN;Acc:ZDB-GENE-091204-117]










Genes with expression patterns similar to nphp3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nphp3 ENSDARG00000078261 110 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nephronophthisis 3 [Source:ZFIN;Acc:ZDB-GENE-091204-117]
2. FAM200A FAM200A 19 1.848 - 0.923 - - - - - 0.925 -
3. TDRD15 TDRD15 46 1.808 - 0.831 - - - 0.977 - - -
4. rhot1b ENSDARG00000103313, ENSDARG00000109702, ENSDARG00000114871 44 1.793 - 0.952 - - - - 0.841 - - ras homolog family member T1 [Source:ZFIN;Acc:ZDB-GENE-061009-52]
5. BX000999.4 BX000999.4 206 1.779 - - - - - 0.930 - 0.849 -
6. CEP85 ENSDARG00000060215 537 1.708 - - - - - 0.908 - 0.800 - centrosomal protein 85 [Source:ZFIN;Acc:ZDB-GENE-030131-1998]
7. pcgf5b ENSDARG00000052388 163 1.704 - - - - - 0.977 0.727 - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
8. st6gal2l st6gal2l 292 1.693 - - - - - 0.966 0.727 - -
9. CR759791.3 CR759791.3 134 1.679 - - - 0.701 - 0.978 - - -
10. fndc1 ENSDARG00000002847 178 1.626 - - 0.714 - - - - 0.912 - fibronectin type III domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-332]
11. HOOK3 ENSDARG00000114329 1980 1.586 - - - - - 0.828 - 0.758 - hook microtubule tethering protein 3 [Source:HGNC Symbol;Acc:HGNC:23576]
12. dre-mir-222a ENSDARG00000090347 131 1.562 - - 0.765 - - - - 0.797 - dre-mir-222a [Source:miRBase;Acc:MI0001388]
13. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 1.559 - - - - - 0.836 0.723 - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
14. U2_6 U2_6 1155 1.555 - - - 0.703 - 0.852 - - -
15. topbp1 ENSDARG00000059322 241 1.547 - - - - 0.714 - 0.833 - - DNA topoisomerase II binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060626-1]
16. zgc:194621 ENSDARG00000074696 85 1.491 - 0.746 - - - - - 0.745 - zgc:194621 [Source:ZFIN;Acc:ZDB-GENE-081022-130]
17. rgs7 rgs7 208 1.453 - 0.715 - - - - - 0.738 -
18. fbxo42 ENSDARG00000087545 262 1.42 - - - 0.712 - - - 0.708 - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
19. TESK1_1 TESK1_1 276 0.991 - - - - - 0.991 - - -
20. znf750 ENSDARG00000102267 327 0.986 - - - - - 0.986 - - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
21. ngly1 ENSDARG00000003205 733 0.985 - - - - - 0.985 - - - N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
22. AC024175.9 AC024175.9 56 0.983 - - - - - 0.983 - - -
23. si:dkeyp-110g5.4 ENSDARG00000092482 249 0.983 - - - - - 0.983 - - - si:dkeyp-110g5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-452]
24. calhm3 ENSDARG00000079602 4 0.981 - - - - - - - 0.981 - calcium homeostasis modulator 3 [Source:ZFIN;Acc:ZDB-GENE-081107-70]
25. C13H4orf32 C13H4orf32 174 0.981 - - - - - 0.981 - - -
26. CR936975.1 ENSDARG00000096862 22 0.981 - - - - - - - 0.981 -
27. angptl2a ENSDARG00000024030 8 0.981 - - - - - - - 0.981 - angiopoietin-like 2a [Source:ZFIN;Acc:ZDB-GENE-080721-15]
28. dhrs13a.2 ENSDARG00000111240 491 0.981 - - - - - 0.981 - - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
29. col10a1 col10a1 19 0.981 - - - - - - - 0.981 -
30. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.98 - - - - - 0.980 - - - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
31. THEM6_1 ENSDARG00000103914 469 0.98 - - - - - 0.980 - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
32. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 0.98 - - - - - - - 0.980 - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
33. slco2a1 ENSDARG00000061896 58 0.98 - - - - - 0.980 - - - solute carrier organic anion transporter family, member 2A1 [Source:ZFIN;Acc:ZDB-GENE-060606-3]
34. tmem53 ENSDARG00000038789 411 0.979 - - - - - 0.979 - - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
35. MYOF ENSDARG00000006112 436 0.979 - - - - - 0.979 - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
36. CU929417.2 CU929417.2 94 0.977 - - - - - 0.977 - - -
37. sh3d19_1 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 90 0.977 - - - - - 0.977 - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
38. CCDC64B CCDC64B 337 0.977 - - - - - 0.977 - - -
39. sc:d0139 sc:d0139 233 0.977 - - - - - 0.977 - - -
40. si:dkey-115f9.2 si:dkey-115f9.2 18 0.976 - - - - - 0.976 - - -
41. egr3 ENSDARG00000089156 71 0.976 - - - - - 0.976 - - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
42. dbnla ENSDARG00000008170 2129 0.976 - - - - - 0.976 - - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
43. CABZ01083834.1 CABZ01083834.1 38 0.976 - - - - - - - 0.976 -
44. si:dkey-57h18.2 33 0.976 - - - - - 0.976 - - - si:dkey-57h18.2, transcript variant X1
45. zgc:110286 92 0.976 - - - - - 0.976 - - - zgc:110286
46. si:dkey-27i16.3 si:dkey-27i16.3 494 0.976 - - - - - 0.976 - - -
47. slc6a19b ENSDARG00000056719 140 0.976 - - - - - 0.976 - - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
48. CR759816.1 ENSDARG00000098977 27 0.976 - - - - - 0.976 - - -
49. CIR1 ENSDARG00000099733 66 0.976 - - - - - 0.976 - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
50. si:ch211-155d24.7 si:ch211-155d24.7 17 0.975 - - - - - - - 0.975 -
51. bace2 ENSDARG00000044781 17 0.975 - - - - - 0.975 - - - beta-secretase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-68]
52. inhbab ENSDARG00000024759 29 0.975 - - - - - 0.975 - - - inhibin subunit beta Ab [Source:ZFIN;Acc:ZDB-GENE-050525-2]
53. tpk1 ENSDARG00000038040, ENSDARG00000114161 334 0.975 - - - - - 0.975 - - - thiamin pyrophosphokinase 1 [Source:ZFIN;Acc:ZDB-GENE-041010-176]
54. ankrd39 ENSDARG00000041350 73 0.975 - - - - - 0.975 - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
55. ccdc80l2 ENSDARG00000044695 150 0.974 - - - - - 0.974 - - - coiled-coil domain containing 80 like 2 [Source:ZFIN;Acc:ZDB-GENE-091118-63]
56. si:ch211-207c6.14 si:ch211-207c6.14 19 0.974 - - - - - 0.974 - - -
57. rhoab ENSDARG00000094673 26 0.974 - - - - - 0.974 - - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
58. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 0.974 - - - - - 0.974 - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
59. tph2 ENSDARG00000057239, ENSDARG00000109777 55 0.974 - - - - - 0.974 - - - tryptophan hydroxylase 2 (tryptophan 5-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-040624-4]
60. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.974 - - - - - 0.974 - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
61. ccdc173 ENSDARG00000077928 260 0.974 - - - - - 0.974 - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
62. crybb3 ENSDARG00000041301 48 0.974 - - - - - 0.974 - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
63. traf2b ENSDARG00000101036 429 0.973 - - - - - 0.973 - - - Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
64. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 0.973 - - - - - 0.973 - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
65. CABZ01072853.1 CABZ01072853.1 35 0.973 - - - - - - - 0.973 -
66. ZC3H11A ENSDARG00000009754 281 0.973 - - - - - 0.973 - - - zinc finger CCCH-type containing 11A [Source:ZFIN;Acc:ZDB-GENE-030131-3272]
67. sez6a ENSDARG00000100876 35 0.973 - - - - - 0.973 - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]
68. samd11 ENSDARG00000077852 631 0.972 - - - - - 0.972 - - - sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
69. si:ch211-105d18.6 si:ch211-105d18.6 59 0.972 - - - - - 0.972 - - -
70. CABZ01072083.1 CABZ01072083.1 56 0.972 - - - - - 0.972 - - -
71. selj 884 0.972 - - - - - 0.972 - - - selenoprotein J
72. PCSK6 ENSDARG00000104574 710 0.972 - - - - - 0.972 - - - proprotein convertase subtilisin/kexin type 6 [Source:ZFIN;Acc:ZDB-GENE-100908-1]
73. hig1 hig1 2493 0.972 - - - - - 0.972 - - -
74. FYCO1 FYCO1 194 0.972 - - - - - 0.972 - - -
75. SLC22A15 ENSDARG00000055445 111 0.972 - - - - - 0.972 - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
76. CU929328.1 ENSDARG00000105332 31 0.972 - - - - - 0.972 - - -
77. slc12a9 ENSDARG00000060366 293 0.972 - - - - - 0.972 - - - solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
78. CU302436.3 CU302436.3 174 0.972 - - - - - 0.972 - - -
79. adam15 ENSDARG00000089213 359 0.971 - - - - - 0.971 - - - ADAM metallopeptidase domain 15 [Source:ZFIN;Acc:ZDB-GENE-070809-4]
80. rabep2 ENSDARG00000061213 465 0.971 - - - - - 0.971 - - - rabaptin, RAB GTPase binding effector protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-572]
81. dnajb9a ENSDARG00000052072 578 0.971 - - - - - 0.971 - - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
82. mesdc2 776 0.971 - - - - - 0.971 - - - mesoderm development candidate 2, transcript variant X2
83. serac1 ENSDARG00000056121, ENSDARG00000116580 196 0.971 - - - - - 0.971 - - - serine active site containing 1 [Source:ZFIN;Acc:ZDB-GENE-040616-1]
84. CABZ01053617.1 CABZ01053617.1 5 0.97 - - - - - - - 0.970 -
85. si:dkey-117n7.5 ENSDARG00000089640 452 0.97 - - - - - 0.970 - - - si:dkey-117n7.5 [Source:ZFIN;Acc:ZDB-GENE-060503-331]
86. zgc:163030 ENSDARG00000069192 2963 0.97 - - - - - 0.970 - - - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
87. ccnt2a ENSDARG00000036685 168 0.97 - - - - - 0.970 - - - cyclin T2a [Source:ZFIN;Acc:ZDB-GENE-030131-5779]
88. mif ENSDARG00000071336 1328 0.969 - - - - - 0.969 - - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
89. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 0.969 - - - - - 0.969 - - - guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
90. 5S_rRNA_15 5S_rRNA_15 9 0.969 - - - - - - - 0.969 -
91. sema6d ENSDARG00000002748 133 0.969 - - - - - 0.969 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
92. si:dkey-240e12.6 ENSDARG00000110137 674 0.969 - - - - - 0.969 - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
93. cnot8 ENSDARG00000020043 866 0.969 - - - - - 0.969 - - - CCR4-NOT transcription complex, subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2845]
94. ube2j1 ENSDARG00000033489 497 0.969 - - - - - 0.969 - - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
95. pip5k1aa ENSDARG00000100396 1644 0.969 - - - - - 0.969 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
96. si:ch211-190k17.19 ENSDARG00000095756 19 0.969 - - - - - - - 0.969 - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
97. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 0.968 - - - - - 0.968 - - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
98. col4a3 ENSDARG00000003395 499 0.968 - - - - - 0.968 - - - collagen, type IV, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070802-4]
99. FP236334.1 FP236334.1 345 0.968 - - - - - 0.968 - - -
100. rwdd ENSDARG00000068256 964 0.968 - - - - - 0.968 - - - RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]

There are 1223 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA