Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nphp1

Gene Name Gene ID Reads Annotation
nphp1 ENSDARG00000009046, ENSDARG00000113790 104 nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]










Genes with expression patterns similar to nphp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
2. BX322608.1 ENSDARG00000111690 326 1.88 - - - - - 1.000 0.880 - -
3. si:ch211-71k24.5 si:ch211-71k24.5 9 1.88 - - - - - 1.000 0.880 - -
4. ENKD1 ENSDARG00000043550 44 1.863 - - - - - 1.000 - - 0.863 enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
5. zgc:113030 ENSDARG00000069869 53 1.834 - - - - - 1.000 - - 0.834 zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
6. st8sia1 ENSDARG00000098221 34 1.831 - - - - - 1.000 - - 0.831 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
7. si:dkey-111b14.2 si:dkey-111b14.2 25 1.83 0.830 - - - - 1.000 - - -
8. BEGAIN_1 BEGAIN_1 7 1.784 - - - - - 1.000 - - 0.784
9. CCSER1 ENSDARG00000075919 16 1.724 0.724 - - - - 1.000 - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
10. ADAMTS15 ADAMTS15 73 1.714 - - - - - 1.000 - - 0.714
11. cacng7b ENSDARG00000070624 18 1.712 - - 0.712 - - 1.000 - - - calcium channel, voltage-dependent, gamma subunit 7b [Source:ZFIN;Acc:ZDB-GENE-100921-51]
12. zgc:113142 ENSDARG00000038969 74 1.678 0.893 - - - - - 0.785 - - zgc:113142 [Source:ZFIN;Acc:ZDB-GENE-050220-2]
13. cox5aa ENSDARG00000088383 21 1.651 0.893 0.758 - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
14. zfpm2a ENSDARG00000040123 46 1.644 - - - - - 0.764 0.880 - - zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]
15. SLC15A5 ENSDARG00000089974 18 1.622 - - - - - - 0.783 - 0.839 solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
16. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1.62 0.893 - - - - - 0.727 - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
17. nitr3c ENSDARG00000057620, ENSDARG00000077998, ENSDARG00000111724 96 1.62 - - - - - - 0.883 - 0.737 novel immune-type receptor 3c [Source:ZFIN;Acc:ZDB-GENE-041001-13]
18. ATP5SL ATP5SL 130 1.609 0.902 - - - - - 0.707 - -
19. ak7b ENSDARG00000017023 25 1.593 0.893 - - 0.700 - - - - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
20. camk1db ENSDARG00000017446 47 1.589 - - - 0.709 - - 0.880 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
21. gpr22 gpr22 115 1.578 - - - 0.759 - 0.819 - - -
22. UBXN11 ENSDARG00000053828 22 1.565 - - - 0.721 - - - - 0.844 UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
23. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 1.563 - - - - - - 0.752 - 0.811 zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
24. ptrfb ptrfb 567 1.552 0.816 - - - - - 0.736 - -
25. ttll9 ENSDARG00000062806 89 1.546 - 0.780 - - - 0.766 - - - tubulin tyrosine ligase-like family, member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1582]
26. d2hgdh ENSDARG00000060210 362 1.54 0.781 - - 0.759 - - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
27. ENSDARG00000023499 ENSDARG00000023499 395 1.534 - 0.817 - 0.717 - - - - -
28. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.52 - - - 0.766 - 0.754 - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
29. si:dkey-1f1.3 si:dkey-1f1.3 96 1.508 0.761 0.747 - - - - - - -
30. STX3 ENSDARG00000051981 23 1.506 0.767 - - - - - 0.739 - - syntaxin 3 [Source:HGNC Symbol;Acc:HGNC:11438]
31. taf5l ENSDARG00000025808 556 1.504 - 0.726 - - - - 0.778 - - TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5987]
32. lbx1b ENSDARG00000018611 399 1.5 - - - 0.762 - - 0.738 - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
33. hnrnpa3 ENSDARG00000059351 453 1.493 - - - 0.780 - 0.713 - - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
34. SLITRK5 SLITRK5 122 1.489 - 0.733 - - - 0.756 - - -
35. gnl1 ENSDARG00000061789, ENSDARG00000114276 78 1.486 - - - - - 0.747 - - 0.739 guanine nucleotide binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-060323-1]
36. porcnl_1 ENSDARG00000052455 683 1.48 - 0.767 - - - - 0.713 - - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
37. BX537137.1 ENSDARG00000092436 77 1.475 - - - 0.757 - - 0.718 - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
38. si:ch211-225b11.4 ENSDARG00000093563 42 1.472 - - - 0.764 - - 0.708 - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
39. anxa5a ENSDARG00000026406 19 1.472 - - - - - 0.764 0.708 - - annexin A5a [Source:ZFIN;Acc:ZDB-GENE-080220-29]
40. RNF39 RNF39 52 1.472 - - - 0.723 - - - - 0.749
41. trim36 ENSDARG00000062794 785 1.469 - 0.758 - 0.711 - - - - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
42. wu:fe36b12 wu:fe36b12 118 1.463 - - - - - 0.702 0.761 - -
43. zgc:158254 ENSDARG00000071233 265 1.462 - 0.757 - - - - 0.705 - - zgc:158254 [Source:ZFIN;Acc:ZDB-GENE-070112-2222]
44. si:ch211-196f5.9 ENSDARG00000096451 70 1.45 - - - 0.716 - - 0.734 - - si:ch211-196f5.9 [Source:ZFIN;Acc:ZDB-GENE-120709-32]
45. si:dkey-178a21.3 si:dkey-178a21.3 23 1.446 - 0.733 0.713 - - - - - -
46. SMARCA4 ENSDARG00000104339 48 1.445 - - - 0.728 - 0.717 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
47. adgb ENSDARG00000005595 118 1.445 - 0.711 - - - - - - 0.734 androglobin [Source:ZFIN;Acc:ZDB-GENE-041001-205]
48. KCNB2 ENSDARG00000088842 35 1.43 0.710 - - 0.720 - - - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
49. hltf ENSDARG00000026053 115 1.409 - - - 0.702 - - 0.707 - - helicase-like transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-3306]
50. r3hdm4 ENSDARG00000063254 201 1 - - - - - 1.000 - - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
51. si:dkey-24c2.6 si:dkey-24c2.6 1 1 - - - - - 1.000 - - -
52. si:dkey-23a23.1 ENSDARG00000094824 1 1 - - - - - 1.000 - - - si:dkey-23a23.1 [Source:ZFIN;Acc:ZDB-GENE-060503-65]
53. fam160b2 ENSDARG00000060029, ENSDARG00000115630 221 1 - - - - - 1.000 - - - family with sequence similarity 160, member B2 [Source:ZFIN;Acc:ZDB-GENE-061110-76]
54. AL844567.1_1 AL844567.1_1 34 1 - - - - - 1.000 - - -
55. si:dkey-45e15.9 si:dkey-45e15.9 0 1 - - - - - 1.000 - - -
56. si:ch211-108c6.2 14 1 - - - - - 1.000 - - - si:ch211-108c6.2
57. si:dkey-6a5.10 si:dkey-6a5.10 17 1 - - - - - 1.000 - - -
58. si:dkey-162b3.5 si:dkey-162b3.5 24 1 - - - - - 1.000 - - -
59. si:ch211-260c23.1 13 1 - - - - - 1.000 - - - si:ch211-260c23.1, transcript variant X7
60. MFAP4_5 MFAP4_5 4 1 - - - - - 1.000 - - -
61. BX664622.3 BX664622.3 42 1 1.000 - - - - - - - -
62. CU468896.2 CU468896.2 38 1 - - - - - 1.000 - - -
63. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 - - - - - 1.000 - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
64. PCDH10 PCDH10 7 1 - - - - - 1.000 - - -
65. taar14d ENSDARG00000091705, ENSDARG00000111452 1 1 - - - - - 1.000 - - - trace amine associated receptor 14d [Source:ZFIN;Acc:ZDB-GENE-041210-315]
66. acp6 ENSDARG00000040064 197 1 - - - - - 1.000 - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
67. rpz3 ENSDARG00000069728 11 1 - - - - - 1.000 - - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
68. cep89 ENSDARG00000005092 4 1 - - - - - 1.000 - - - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
69. bdkrb1 ENSDARG00000020744 4 1 - - - - - 1.000 - - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
70. IGFN1_2 IGFN1_2 3 1 - - - - - 1.000 - - -
71. antxr1d ENSDARG00000060845 10 1 - - - - - 1.000 - - - ANTXR cell adhesion molecule 1d [Source:ZFIN;Acc:ZDB-GENE-090313-28]
72. CABZ01113374.2 CABZ01113374.2 27 1 - - - - - 1.000 - - -
73. si:ch211-274k16.6 si:ch211-274k16.6 26 1 - - - - - 1.000 - - -
74. GABRA3 ENSDARG00000090883 5 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
75. CABZ01069081.1 CABZ01069081.1 16 1 - - - - - 1.000 - - -
76. si:dkeyp-104b3.21 ENSDARG00000103964 6 1 - - - - - 1.000 - - - si:dkeyp-104b3.21 [Source:ZFIN;Acc:ZDB-GENE-070912-626]
77. slc1a8a ENSDARG00000104204 1 1 - - - - - 1.000 - - - solute carrier family 1 (glutamate transporter), member 8a [Source:ZFIN;Acc:ZDB-GENE-101111-8]
78. sh2d4b sh2d4b 1 1 - - - - - 1.000 - - -
79. ush2a ENSDARG00000029482 10 1 - - - - - 1.000 - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
80. C14orf80 C14orf80 20 1 - - - - - 1.000 - - -
81. six7 ENSDARG00000070107 140 1 - - - - - 1.000 - - - SIX homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-990825-28]
82. ENDOD1_3 ENDOD1_3 9 1 - - - - - 1.000 - - -
83. si:ch211-260g14.9 si:ch211-260g14.9 2 1 - - - - - 1.000 - - -
84. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - - - - 1.000 - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
85. vwc2 ENSDARG00000076495 22 1 - - - - - 1.000 - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
86. asip asip 2 1 - - - - - 1.000 - - -
87. vetz 12 1 1.000 - - - - - - - - vezatin, adherens junctions transmembrane protein, transcript variant X2
88. si:ch211-229o8.4 si:ch211-229o8.4 1 1 - - - - - 1.000 - - -
89. si:dkey-11o15.7 ENSDARG00000058023, ENSDARG00000089758 0 1 - - - - - 1.000 - - - si:dkey-11o15.7 [Source:ZFIN;Acc:ZDB-GENE-091204-328]
90. si:ch73-226l13.2 ENSDARG00000095939 0 1 - - - - - 1.000 - - - si:ch73-226l13.2 [Source:ZFIN;Acc:ZDB-GENE-110411-18]
91. slc6a11a ENSDARG00000074002 189 1 - - - - - 1.000 - - - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
92. ahr1b ENSDARG00000023537 44 1 - - - - - 1.000 - - - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
93. zgc:113516 20 1 - - - - - 1.000 - - - zgc:113516
94. mir124-6 64 1 - - - - - 1.000 - - - microRNA 124-6
95. asphd1 ENSDARG00000075813, ENSDARG00000110592 54 1 - - - - - 1.000 - - - aspartate beta-hydroxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-62]
96. si:ch211-241b2.4 ENSDARG00000100686 19 1 - - - - - 1.000 - - - si:ch211-241b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-191]
97. FAM13C FAM13C 1 1 - - - - - 1.000 - - -
98. wdr65 wdr65 251 1 - - - - - 1.000 - - -
99. ZNF541 ENSDARG00000052188 0 1 - - - - - 1.000 - - - zinc finger protein 541 [Source:ZFIN;Acc:ZDB-GENE-060526-239]
100. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1 - - - - - 1.000 - - -

There are 1039 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA