Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for npdc1

Gene Name Gene ID Reads Annotation
npdc1 npdc1 221










Genes with expression patterns similar to npdc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. npdc1 npdc1 221 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. rab42a ENSDARG00000034215 692 2.546 - - - - - 0.772 0.887 0.887 - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
3. cox4i2 ENSDARG00000022509 362 1.929 - 0.983 - - - - - 0.946 - cytochrome c oxidase subunit 4I2 [Source:ZFIN;Acc:ZDB-GENE-040426-1775]
4. si:dkeyp-73d8.8 ENSDARG00000094045 17 1.894 1.000 - - - - - 0.894 - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
5. atp2b1b ENSDARG00000007788 56 1.893 - - - 0.963 - - - 0.930 - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
6. gpr22 gpr22 115 1.881 - - - 0.956 - - - 0.925 -
7. dnajc3 dnajc3 802 1.875 - - 0.994 - - - - 0.881 -
8. C3H16orf89 C3H16orf89 449 1.87 1.000 - - - - - - 0.870 -
9. CR855996.2 ENSDARG00000104450 310 1.822 0.823 - 0.999 - - - - - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
10. napgl napgl 39 1.802 - - - - - - 0.857 0.945 -
11. CDH12_1 CDH12_1 57 1.8 - - - - - - 0.862 0.938 -
12. THSD1 ENSDARG00000075273, ENSDARG00000112294 228 1.784 0.854 - - - - - - 0.930 - thrombospondin, type I, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100105-3]
13. si:ch211-199m9.3 50 1.775 0.866 - - 0.909 - - - - - si:ch211-199m9.3, transcript variant X3
14. tlcd1 ENSDARG00000002391 90 1.765 1.000 - - - - - 0.765 - - TLC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-173]
15. si:dkey-117m1.3 si:dkey-117m1.3 154 1.737 - - - 0.857 - - - 0.880 -
16. zfyve26 ENSDARG00000040131 87 1.736 0.905 - - 0.831 - - - - - zinc finger, FYVE domain containing 26 [Source:ZFIN;Acc:ZDB-GENE-030131-3286]
17. fam188a 275 1.731 - - - 0.869 - - - 0.862 - family with sequence similarity 188, member A
18. itpr1a ENSDARG00000014655, ENSDARG00000117119 151 1.726 0.805 - - - - - - 0.921 - inositol 1,4,5-trisphosphate receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070604-3]
19. BX855614.1 ENSDARG00000094551 1294 1.726 - - 0.968 - - - - 0.758 - si:dkey-262g12.9 [Source:NCBI gene;Acc:555910]
20. TMEM87A TMEM87A 2407 1.719 - - 0.975 - - - - 0.744 -
21. ZNF337_20 ZNF337_20 65 1.714 0.941 - - - - - 0.773 - -
22. tph1a ENSDARG00000029432, ENSDARG00000114918 24 1.714 - - - - - - 0.761 0.953 - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
23. ocrl ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 90 1.713 0.943 - - - - - 0.770 - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
24. lef1 ENSDARG00000031894 492 1.712 - - - 0.932 - - 0.780 - - lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
25. tbc1d12a ENSDARG00000038237 698 1.71 - - 0.993 0.717 - - - - - TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
26. si:dkey-52l6.2 si:dkey-52l6.2 384 1.71 - - - - - 0.761 - 0.949 -
27. gal3st1 gal3st1 108 1.699 0.946 0.753 - - - - - - -
28. LRIF1 LRIF1 135 1.698 0.845 - - - - - - 0.853 -
29. mtmr7a ENSDARG00000037101, ENSDARG00000111336 161 1.692 - 0.794 - - - - - 0.898 - myotubularin related protein 7a [Source:ZFIN;Acc:ZDB-GENE-060421-7754]
30. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1.692 - 0.798 - - - - 0.894 - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
31. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1.682 - - - 0.896 - - 0.786 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
32. ppp1r3da ENSDARG00000077513 109 1.68 0.790 - - - - - - 0.890 - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
33. foxl2 61 1.676 - - - - - - 0.764 0.912 - forkhead box L2, transcript variant X1
34. pknox1.1_1 ENSDARG00000018765 203 1.664 - 0.794 - - - - 0.870 - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
35. SMAD4_3 SMAD4_3 131 1.661 - 0.840 - 0.821 - - - - -
36. CT573393.1 CT573393.1 97 1.659 0.723 - - 0.936 - - - - -
37. CR376785.2 CR376785.2 175 1.65 - - - - - 0.709 - 0.941 -
38. si:dkey-242k1.6 ENSDARG00000101205 112 1.647 - - - 0.918 - 0.729 - - - si:dkey-242k1.6 [Source:ZFIN;Acc:ZDB-GENE-041008-84]
39. LRIF1_1 LRIF1_1 228 1.647 - - - 0.700 - - - 0.947 -
40. nlgn3a ENSDARG00000104786 91 1.645 0.726 - - 0.919 - - - - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
41. si:dkey-11c5.11 ENSDARG00000096637 130 1.636 0.743 - - - - - - 0.893 - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
42. C21HXorf40A C21HXorf40A 216 1.636 0.701 - - - - - - 0.935 -
43. CR788231.1 CR788231.1 61 1.636 - 0.720 - 0.916 - - - - -
44. b3gnt3.3 ENSDARG00000093521 430 1.634 0.776 - - - - - - 0.858 - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081105-12]
45. sema3c ENSDARG00000034300 881 1.629 - 0.730 - - - - - 0.899 - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
46. PRR5L PRR5L 408 1.627 - - - 0.891 - 0.736 - - -
47. gng8 ENSDARG00000042970 117 1.624 - - - - - - 0.721 0.903 - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
48. tmem68 ENSDARG00000086737 209 1.615 - - - 0.735 - - - 0.880 - transmembrane protein 68 [Source:ZFIN;Acc:ZDB-GENE-040426-1267]
49. ACBD3 ENSDARG00000042623 159 1.612 0.788 - - 0.824 - - - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
50. CU856207.1 CU856207.1 87 1.602 - 0.744 - - - - - 0.858 -
51. wasb ENSDARG00000026350 139 1.598 - 0.887 - - - - - 0.711 - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
52. OXSM ENSDARG00000098855 253 1.59 - - - - - - 0.720 0.870 - 3-oxoacyl-ACP synthase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-170215-2]
53. P2RY14 ENSDARG00000103305 41 1.582 - 0.776 - - - - 0.806 - - purinergic receptor P2Y14 [Source:HGNC Symbol;Acc:HGNC:16442]
54. si:ch211-208h1.1 si:ch211-208h1.1 262 1.573 - 0.775 - 0.798 - - - - -
55. znf653 ENSDARG00000093469 149 1.57 0.784 - - - - - 0.786 - - zinc finger protein 653 [Source:ZFIN;Acc:ZDB-GENE-071116-3]
56. BX004880.1 BX004880.1 638 1.553 - - - 0.758 - - - 0.795 -
57. gtpbp2 272 1.55 0.789 - - - - - - 0.761 - GTP binding protein 2
58. lipt1 ENSDARG00000025233 385 1.542 - 0.744 - - - - - 0.798 - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
59. NHSL1 NHSL1 182 1.538 - 0.798 - - - 0.740 - - -
60. ccdc80l2 ENSDARG00000044695 150 1.527 0.757 - - 0.770 - - - - - coiled-coil domain containing 80 like 2 [Source:ZFIN;Acc:ZDB-GENE-091118-63]
61. mtfr1 ENSDARG00000045304 277 1.517 0.754 - - 0.763 - - - - - mitochondrial fission regulator 1 [Source:ZFIN;Acc:ZDB-GENE-041212-86]
62. CU571255.1 CU571255.1 902 1.511 0.706 0.805 - - - - - - -
63. rev3l ENSDARG00000058801 784 1.5 - 0.704 - - - - - 0.796 - REV3-like, polymerase (DNA directed), zeta, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050302-55]
64. lrp1bb ENSDARG00000061517 172 1.493 0.714 0.779 - - - - - - - low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
65. PRF1 PRF1 69 1.484 0.732 - - - - - 0.752 - -
66. esama ENSDARG00000077039 165 1.474 - 0.734 - 0.740 - - - - - endothelial cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-090629-1]
67. socs1a ENSDARG00000038095 20 1 1.000 - - - - - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
68. slc5a8l ENSDARG00000003697, ENSDARG00000110685 69 1 1.000 - - - - - - - - solute carrier family 5 (iodide transporter), member 8-like [Source:ZFIN;Acc:ZDB-GENE-061110-98]
69. rgs13 ENSDARG00000017653 8 1 1.000 - - - - - - - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
70. C5H9orf9 C5H9orf9 6 1 1.000 - - - - - - - -
71. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1 1.000 - - - - - - - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
72. fnbp1 fnbp1 5 1 1.000 - - - - - - - -
73. nipa1 ENSDARG00000055917 132 1 1.000 - - - - - - - - NIPA magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-041010-164]
74. si:dkey-162h11.2 si:dkey-162h11.2 257 1 1.000 - - - - - - - -
75. mir30b 4 1 1.000 - - - - - - - - microRNA 30b
76. pcolce2b ENSDARG00000055575 2 1 1.000 - - - - - - - - procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
77. USP53 USP53 5 1 1.000 - - - - - - - -
78. otx1a 1607 1 1.000 - - - - - - - - orthodenticle homeobox 1a
79. fam166b ENSDARG00000100292 14 1 1.000 - - - - - - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
80. ENSDARG00000089152 ENSDARG00000089152 12 1 1.000 - - - - - - - -
81. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 1 1.000 - - - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
82. stk33 ENSDARG00000054318, ENSDARG00000114909 34 1 1.000 - - - - - - - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
83. C11H1orf116 C11H1orf116 9 1 1.000 - - - - - - - -
84. rasal3 ENSDARG00000089933 17 1 1.000 - - - - - - - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
85. si:ch211-196c10.13 ENSDARG00000096756 28 1 1.000 - - - - - - - - si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
86. lamb1a_1 ENSDARG00000101209 13 1 1.000 - - - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
87. PLB1 PLB1 20 1 1.000 - - - - - - - -
88. si:dkey-71l1.1 ENSDARG00000052411 11 1 1.000 - - - - - - - - si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
89. CABZ01067072.1 CABZ01067072.1 17 1 1.000 - - - - - - - -
90. si:ch211-152p23.2 ENSDARG00000094519 4 1 1.000 - - - - - - - - si:ch211-152p23.2 [Source:ZFIN;Acc:ZDB-GENE-081104-134]
91. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1 1.000 - - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
92. dnase1l3l dnase1l3l 16 1 1.000 - - - - - - - -
93. dio2 ENSDARG00000094857 17 1 1.000 - - - - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
94. CYP46A1 CYP46A1 16 1 1.000 - - - - - - - -
95. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1 1.000 - - - - - - - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
96. zgc:113425 ENSDARG00000026616 29 1 1.000 - - - - - - - - zgc:113425 [Source:ZFIN;Acc:ZDB-GENE-050320-128]
97. TEAD1 TEAD1 43 1 1.000 - - - - - - - -
98. CU915778.2 CU915778.2 194 1 1.000 - - - - - - - -
99. si:dkey-3d18.5 ENSDARG00000096239 3 1 1.000 - - - - - - - - si:dkey-3d18.5 [Source:ZFIN;Acc:ZDB-GENE-120215-143]
100. BX601644.1 ENSDARG00000090632 2 1 1.000 - - - - - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]

There are 1505 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA