Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for npc1

Gene Name Gene ID Reads Annotation
npc1 ENSDARG00000017180 3724 Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]










Genes with expression patterns similar to npc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. npc1 ENSDARG00000017180 3724 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
2. serpina1l ENSDARG00000090850 10625 4.078 - - 0.847 0.726 0.958 0.846 - - 0.701 serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
3. NCOA7_1 NCOA7_1 3222 3.993 0.706 - - 0.759 - 0.873 0.931 - 0.724
4. sepp1b 1004 3.947 0.781 0.791 0.765 0.729 - 0.881 - - - selenoprotein P, plasma, 1b
5. dmgdh ENSDARG00000025703 6088 3.93 0.728 - 0.870 0.754 - - 0.873 - 0.705 dimethylglycine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-080227-8]
6. abca1b ENSDARG00000079009 14119 3.401 - - 0.864 0.725 - 0.955 0.857 - - ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]
7. cry3_1 cry3_1 3347 3.394 - - 0.873 0.794 - 0.893 0.834 - -
8. sardh ENSDARG00000058102, ENSDARG00000112110 2150 3.369 0.758 - 0.806 - 0.971 0.834 - - - sarcosine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-996]
9. CFI 3801 3.348 - 0.739 0.810 - - 0.888 0.911 - - complement factor I
10. slc43a2b ENSDARG00000061120, ENSDARG00000117188 33657 3.249 - - 0.820 0.787 - 0.935 - - 0.707 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
11. cad ENSDARG00000041895 4977 3.197 - 0.773 - - 0.825 0.744 0.855 - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:ZFIN;Acc:ZDB-GENE-021030-4]
12. f2 ENSDARG00000036041 3129 3.196 - 0.720 0.782 - - 0.835 0.859 - - coagulation factor II (thrombin) [Source:ZFIN;Acc:ZDB-GENE-030131-4606]
13. pcbd1 ENSDARG00000031981 3373 3.188 0.787 0.787 0.775 - - 0.839 - - - pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
14. elovl5 ENSDARG00000004979 3032 3.178 0.710 - 0.793 0.740 - 0.935 - - - ELOVL fatty acid elongase 5 [Source:ZFIN;Acc:ZDB-GENE-040407-2]
15. zgc:136410 ENSDARG00000102241 8433 3.17 - 0.714 0.734 0.757 - 0.965 - - - zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
16. pla2g12b ENSDARG00000015662 27239 3.15 - - 0.767 0.748 - 0.900 0.735 - - phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
17. CD68 CD68 4599 3.126 - - 0.753 0.702 - 0.969 - - 0.702
18. APOB APOB 33858 3.08 - - 0.721 0.725 - 0.894 0.740 - -
19. pck2 ENSDARG00000020956, ENSDARG00000110463 4713 3.078 0.755 0.783 0.751 - - 0.789 - - - phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2266]
20. slc25a20 ENSDARG00000040401 9258 3.076 - - 0.711 0.746 - 0.901 - - 0.718 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1869]
21. SLC22A23 ENSDARG00000078856 2921 3.057 - - 0.814 0.729 - 0.746 - - 0.768 solute carrier family 22, member 23 [Source:ZFIN;Acc:ZDB-GENE-030131-3564]
22. zgc:173961 zgc:173961 1540 3.045 0.734 - 0.742 - - 0.703 0.866 - -
23. acp5a ENSDARG00000019763, ENSDARG00000111996 7752 3.007 0.790 - 0.758 0.712 - - 0.747 - - acid phosphatase 5a, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040426-2864]
24. sord ENSDARG00000053405 2406 2.999 - - 0.733 0.785 - 0.733 0.748 - - sorbitol dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-1231]
25. isca1 ENSDARG00000051956 5855 2.623 0.826 - - - - 0.893 0.904 - - iron-sulfur cluster assembly 1 [Source:ZFIN;Acc:ZDB-GENE-050626-94]
26. shmt1 ENSDARG00000052816 5463 2.612 0.761 - - - - 0.902 - 0.949 - serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]
27. CABZ01059390.1 CABZ01059390.1 4340 2.604 - - - - 0.963 0.824 0.817 - -
28. cfb ENSDARG00000055278, ENSDARG00000110358 1725 2.579 0.804 - - - - 0.882 0.893 - - complement factor B [Source:ZFIN;Acc:ZDB-GENE-980526-487]
29. myl9b ENSDARG00000008030 7830 2.539 - - 0.816 - - 0.837 0.886 - - myosin, light chain 9b, regulatory [Source:ZFIN;Acc:ZDB-GENE-040426-2296]
30. ctsba ENSDARG00000055120 18732 2.537 - - 0.856 0.714 - 0.967 - - - cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
31. epdl2 ENSDARG00000055539 1895 2.523 - - - 0.715 - 0.950 0.858 - - ependymin-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-250]
32. psap ENSDARG00000013968 22919 2.514 - - 0.809 0.762 - 0.943 - - - prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
33. CNDP1 CNDP1 6456 2.508 - - 0.864 - - 0.928 0.716 - -
34. tfa ENSDARG00000016771 30517 2.49 - - 0.879 0.708 - 0.903 - - - transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
35. ces2 ENSDARG00000041569, ENSDARG00000110630 5541 2.487 - - - 0.721 - 0.912 0.854 - - carboxylesterase 2 (intestine, liver) [Source:ZFIN;Acc:ZDB-GENE-061013-99]
36. mthfd1b ENSDARG00000040492 3784 2.474 0.745 - 0.830 - - 0.899 - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b [Source:ZFIN;Acc:ZDB-GENE-020905-4]
37. fga ENSDARG00000020741 5580 2.472 - - 0.794 0.746 - 0.932 - - - fibrinogen alpha chain [Source:ZFIN;Acc:ZDB-GENE-031010-21]
38. col16a1 ENSDARG00000009194 5600 2.472 - - - - 0.950 0.770 0.752 - - collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
39. serpinc1 ENSDARG00000042684, ENSDARG00000110644, ENSDARG00000114606 1045 2.471 0.889 - 0.712 - - 0.870 - - - serpin peptidase inhibitor, clade C (antithrombin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-264]
40. sb:cb37 ENSDARG00000041645 2018 2.462 0.720 - 0.874 - - 0.868 - - - sb:cb37 [Source:ZFIN;Acc:ZDB-GENE-030131-9800]
41. hao1 ENSDARG00000024160 6104 2.448 - - 0.804 0.747 - - 0.897 - - hydroxyacid oxidase (glycolate oxidase) 1 [Source:ZFIN;Acc:ZDB-GENE-060519-2]
42. adssl1 ENSDARG00000099517 7518 2.441 - - 0.724 0.739 0.978 - - - - adenylosuccinate synthase like 1 [Source:ZFIN;Acc:ZDB-GENE-040516-18]
43. si:dkey-69o16.5 ENSDARG00000070057 3628 2.432 - - - 0.707 - 0.869 - 0.856 - si:dkey-69o16.5 [Source:ZFIN;Acc:ZDB-GENE-081104-432]
44. gart ENSDARG00000101089 6062 2.429 - - 0.800 0.772 - 0.857 - - - phosphoribosylglycinamide formyltransferase [Source:ZFIN;Acc:ZDB-GENE-000616-14]
45. slc43a2a ENSDARG00000036848 6798 2.428 - - - 0.753 - 0.933 0.742 - - solute carrier family 43 (amino acid system L transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-964]
46. cst3 ENSDARG00000007795 13753 2.422 0.723 0.797 - - - 0.902 - - - cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
47. apom ENSDARG00000076838 4732 2.417 - - 0.857 0.704 - 0.856 - - - apolipoprotein M [Source:ZFIN;Acc:ZDB-GENE-010605-5]
48. txn ENSDARG00000044125, ENSDARG00000116040 4758 2.412 - 0.872 - 0.733 - 0.807 - - - thioredoxin [Source:ZFIN;Acc:ZDB-GENE-040718-162]
49. taldo1 ENSDARG00000103369 3804 2.408 0.742 - - - - 0.865 0.801 - - transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
50. apobb apobb 258472 2.389 - - 0.812 0.744 - 0.833 - - -
51. TMEM254 ENSDARG00000109902 3377 2.389 - - 0.741 0.761 - 0.887 - - - transmembrane protein 254 [Source:ZFIN;Acc:ZDB-GENE-040426-1348]
52. vtnb ENSDARG00000053831 2364 2.387 - - 0.732 0.751 - 0.904 - - - vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
53. dgat2 ENSDARG00000018846 5032 2.383 - - 0.814 0.717 - 0.852 - - - diacylglycerol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-15]
54. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 2.374 - 0.708 0.788 - - 0.878 - - - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
55. bhmt ENSDARG00000013430 91357 2.368 - - 0.760 - - 0.748 0.860 - - betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
56. aqp12 ENSDARG00000043279 1881 2.362 0.778 - 0.790 - - 0.794 - - - aquaporin 12 [Source:ZFIN;Acc:ZDB-GENE-040718-310]
57. mid1ip1l ENSDARG00000018145 2789 2.361 0.770 - 0.734 - - 0.857 - - - MID1 interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-1697]
58. abcb5 ENSDARG00000021787 2875 2.359 0.761 - - - - 0.735 0.863 - - ATP-binding cassette, sub-family B (MDR/TAP), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6414]
59. aldob ENSDARG00000053684 30498 2.356 0.774 - 0.871 0.711 - - - - - aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
60. suclg2 ENSDARG00000044914 7950 2.355 0.705 - 0.729 - - 0.921 - - - succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
61. sfxn2 ENSDARG00000017960, ENSDARG00000111267 3869 2.355 - - 0.719 - - 0.759 0.877 - - sideroflexin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2831]
62. zgc:158374 zgc:158374 2227 2.354 - - 0.812 0.703 - 0.839 - - -
63. apoa1b ENSDARG00000101324 336817 2.353 - - 0.785 - - 0.831 0.737 - - apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
64. serping1 ENSDARG00000058053 1344 2.351 - - 0.798 0.713 - 0.840 - - - serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1262]
65. gdpd1 ENSDARG00000017261, ENSDARG00000111194 2853 2.348 - - 0.716 0.738 - 0.894 - - - glycerophosphodiester phosphodiesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040822-22]
66. MPC2 ENSDARG00000024478 4194 2.346 - - - 0.700 - 0.929 - - 0.717 mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
67. ENSDARG00000086641 ENSDARG00000086641 1819 2.346 - - 0.703 0.783 - - 0.860 - -
68. rbp2a ENSDARG00000070038, ENSDARG00000115141 1688 2.345 - 0.823 0.752 - - 0.770 - - - retinol binding protein 2a, cellular [Source:ZFIN;Acc:ZDB-GENE-020320-2]
69. cdc42bpb ENSDARG00000019383 5976 2.336 0.753 - - - - 0.715 0.868 - - CDC42 binding protein kinase beta (DMPK-like) [Source:ZFIN;Acc:ZDB-GENE-030131-3647]
70. sid4 sid4 1358 2.335 - - 0.784 0.702 - 0.849 - - -
71. apoea ENSDARG00000102004 13212 2.318 - - 0.764 0.729 - 0.825 - - - apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
72. prickle1b ENSDARG00000045694 7536 2.302 0.708 - - - - 0.724 0.870 - - prickle homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2152]
73. znrf2a ENSDARG00000077855 1845 2.299 - 0.795 - 0.717 - 0.787 - - - zinc and ring finger 2a [Source:ZFIN;Acc:ZDB-GENE-070820-15]
74. rpe ENSDARG00000005251, ENSDARG00000117024 3865 2.294 - - 0.714 0.738 - 0.842 - - - ribulose-5-phosphate-3-epimerase [Source:ZFIN;Acc:ZDB-GENE-030131-6837]
75. cpvl ENSDARG00000056480 2115 2.289 0.725 - - 0.714 - 0.850 - - - carboxypeptidase, vitellogenic-like [Source:ZFIN;Acc:ZDB-GENE-031219-2]
76. rrm2b ENSDARG00000033367, ENSDARG00000115899 2754 2.283 0.745 - 0.738 - - 0.800 - - - ribonucleotide reductase M2 b [Source:ZFIN;Acc:ZDB-GENE-030616-614]
77. rhbg ENSDARG00000009018 1131 2.28 0.772 - - 0.715 - 0.793 - - - Rh family, B glycoprotein (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-030131-9542]
78. ctssb.1 ctssb.1 1368 2.269 0.722 0.813 0.734 - - - - - -
79. TM6SF2 ENSDARG00000029057 1239 2.268 0.755 - 0.800 0.713 - - - - - transmembrane 6 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-338]
80. itih2 ENSDARG00000045516 1893 2.265 - 0.748 0.706 - - 0.811 - - - inter-alpha-trypsin inhibitor heavy chain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1942]
81. fgg ENSDARG00000037281, ENSDARG00000114705 10817 2.265 - - 0.773 0.778 - 0.714 - - - fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
82. csnk1db ENSDARG00000006125 2581 2.24 - - - - - 0.728 0.728 0.784 - casein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
83. slc25a25a ENSDARG00000010572 1240 2.239 - - 0.750 0.742 - 0.747 - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25a [Source:ZFIN;Acc:ZDB-GENE-040426-2396]
84. ckmt1 ENSDARG00000016598, ENSDARG00000113143 15024 2.206 - - 0.740 0.747 - 0.719 - - - creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
85. adka ENSDARG00000039429 7670 2.195 - - 0.743 - - 0.742 - - 0.710 adenosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030425-3]
86. APOA4_1 APOA4_1 3645 2.186 - - 0.714 0.706 - 0.766 - - -
87. zgc:158403 ENSDARG00000062757 710 2.174 - - 0.706 0.725 - 0.743 - - - zgc:158403 [Source:ZFIN;Acc:ZDB-GENE-061215-116]
88. epc1 epc1 1164 1.828 - - - - 0.957 - - 0.871 -
89. hcfc1b ENSDARG00000012519 3633 1.805 - - - - 0.939 - - 0.866 - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
90. lgals2b ENSDARG00000038153 2196 1.799 - - - - - 0.904 - 0.895 - lectin, galactoside-binding, soluble, 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1590]
91. ywhag1 ENSDARG00000067626 3786 1.797 - - 0.814 - 0.983 - - - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011115-1]
92. gata6 ENSDARG00000103589 746 1.793 0.832 - - - - 0.961 - - - GATA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-000622-1]
93. serpina1 ENSDARG00000090286 8108 1.791 - - 0.861 - - 0.930 - - - serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1421]
94. fgb ENSDARG00000008969 11737 1.788 - - 0.854 - - 0.934 - - - fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
95. psmb2 ENSDARG00000031511 4016 1.783 - - - - 0.941 - - 0.842 - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
96. itga5 ENSDARG00000006353 1876 1.781 - - - - 0.968 0.813 - - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
97. rnasel3 ENSDARG00000036171, ENSDARG00000116275 3928 1.78 - - 0.877 - - 0.903 - - - ribonuclease like 3 [Source:ZFIN;Acc:ZDB-GENE-050809-5]
98. gnpda2 ENSDARG00000024443 6637 1.775 - - - - - 0.907 0.868 - - glucosamine-6-phosphate deaminase 2 [Source:ZFIN;Acc:ZDB-GENE-091117-41]
99. APOB_1 APOB_1 2217 1.763 - - 0.844 - - 0.919 - - -
100. grhprb ENSDARG00000019986, ENSDARG00000109547 3233 1.762 - - 0.839 - - 0.923 - - - glyoxylate reductase/hydroxypyruvate reductase b [Source:ZFIN;Acc:ZDB-GENE-040426-1847]

There are 1175 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA