Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nme3

Gene Name Gene ID Reads Annotation
nme3 ENSDARG00000100990 3889 NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]










Genes with expression patterns similar to nme3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nme3 ENSDARG00000100990 3889 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
2. SVIL SVIL 2589 4.003 0.721 - 0.943 - - 0.737 0.752 - 0.850
3. thrap3b ENSDARG00000098228 4396 3.273 0.737 - 0.863 - - 0.755 - 0.918 - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
4. mvp ENSDARG00000021242 6875 3.243 0.803 - 0.851 - - - 0.744 - 0.845 major vault protein [Source:ZFIN;Acc:ZDB-GENE-030826-33]
5. arih2 ENSDARG00000012848 7087 2.756 - 0.985 0.844 - - - - 0.927 - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
6. arf6b ENSDARG00000052928 4585 2.682 - - - - - 0.836 - 0.938 0.908 ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
7. CR387996.1 ENSDARG00000097774 3037 2.678 - 0.993 - - 0.776 - - 0.909 -
8. creb3l3l ENSDARG00000020926, ENSDARG00000116217 1458 2.634 - - 0.963 - - 0.787 - 0.884 - cAMP responsive element binding protein 3-like 3 like [Source:ZFIN;Acc:ZDB-GENE-040426-2942]
9. cstf3 ENSDARG00000018904 6111 2.618 0.729 0.990 - - - - - - 0.899 cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
10. tbx3a ENSDARG00000002216 2270 2.597 - - 0.961 - - 0.784 0.852 - - T-box 3a [Source:ZFIN;Acc:ZDB-GENE-070209-80]
11. ppifb ENSDARG00000052842 3533 2.595 0.785 - 0.930 - - - - 0.880 - peptidylprolyl isomerase Fb [Source:ZFIN;Acc:ZDB-GENE-051030-126]
12. sort1b ENSDARG00000056252 2652 2.567 - 0.998 - - - 0.752 - - 0.817 sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
13. klc2 3058 2.561 - - - - 0.768 - - 0.896 0.897 kinesin light chain 2
14. ubap1 ENSDARG00000058746 1049 2.559 - 0.995 - - - 0.812 0.752 - - ubiquitin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-950]
15. slc47a1 ENSDARG00000046012 1426 2.545 - - - - 0.830 0.813 0.902 - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
16. diabloa ENSDARG00000104172 2192 2.509 - - - - - 0.860 0.749 0.900 - diablo, IAP-binding mitochondrial protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1303]
17. asap2b ENSDARG00000019564 1660 2.484 - - - - - 0.873 0.763 - 0.848 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
18. akr1a1a ENSDARG00000035257, ENSDARG00000109404 548 2.481 0.960 - - - - 0.813 0.708 - - aldo-keto reductase family 1, member A1a (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-040808-44]
19. epas1a ENSDARG00000008697 3225 2.479 - - 0.939 - - 0.822 0.718 - - endothelial PAS domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4490]
20. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 2.472 - - 0.965 - - 0.739 0.768 - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
21. chd1l ENSDARG00000015471 1142 2.45 0.859 - 0.888 - - 0.703 - - - chromodomain helicase DNA binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040426-892]
22. g6pca.2 ENSDARG00000013721 2034 2.442 0.713 - - - - 0.941 0.788 - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
23. MPC2 ENSDARG00000024478 4194 2.42 0.743 - - - - 0.841 0.836 - - mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
24. tbc1d1 ENSDARG00000062081, ENSDARG00000109222 1592 2.399 - - - - - 0.763 0.765 0.871 - TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060710-1]
25. hmox1 hmox1 1391 2.397 - 0.801 - - - 0.787 0.809 - -
26. aldh4a1 ENSDARG00000038207 4639 2.396 - - 0.927 - - 0.760 0.709 - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
27. rhov ENSDARG00000070434 808 2.394 0.919 - - - - 0.769 0.706 - - ras homolog family member V [Source:ZFIN;Acc:ZDB-GENE-031002-10]
28. pdlim1 ENSDARG00000019845 5765 2.349 0.769 - 0.836 - - - 0.744 - - PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]
29. coro1ca ENSDARG00000035598 9278 2.346 0.856 - - - - - 0.723 - 0.767 coronin, actin binding protein, 1Ca [Source:ZFIN;Acc:ZDB-GENE-030114-6]
30. f11r f11r 16668 2.312 - 0.786 - - 0.751 0.775 - - -
31. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 2.293 - - - - - 0.785 0.777 - 0.731 transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
32. tmem110l ENSDARG00000045518 1783 2.277 0.830 - - - - 0.739 0.708 - - transmembrane protein 110, like [Source:ZFIN;Acc:ZDB-GENE-040426-912]
33. hoga1 ENSDARG00000018944 800 2.223 0.717 - - - - 0.799 0.707 - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
34. srsf5b ENSDARG00000027734 6996 1.944 - 0.993 0.951 - - - - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
35. sgut1 3470 1.931 - 0.994 0.937 - - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, transcript variant X1
36. snrpa1 ENSDARG00000024651 3306 1.926 - 0.993 - - - - - - 0.933 small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
37. dennd5a ENSDARG00000017006 3426 1.913 - - 0.967 - - - - 0.946 - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
38. cab39l1 ENSDARG00000021374, ENSDARG00000112995 2033 1.895 0.938 - 0.957 - - - - - - calcium binding protein 39, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2897]
39. ing2 ENSDARG00000104907 1336 1.883 - 0.993 - - - - - - 0.890 inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
40. arglu1b ENSDARG00000018319 1110 1.883 0.921 - 0.962 - - - - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
41. emc3 ENSDARG00000020607 3406 1.882 - - 0.958 - - - - 0.924 - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
42. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.881 0.923 - 0.958 - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
43. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.879 - - 0.964 - - - - 0.915 - S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
44. ankrd10b ENSDARG00000004771 654 1.878 0.939 - - - - - - 0.939 - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
45. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.874 0.912 - 0.962 - - - - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
46. WDFY3 ENSDARG00000078890 2092 1.857 - - 0.959 - - - - - 0.898 WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
47. NFRKB ENSDARG00000091512 646 1.855 0.895 - 0.960 - - - - - - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
48. pgam5 ENSDARG00000035608 4044 1.85 - 0.991 - - - - - 0.859 - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
49. DEDD ENSDARG00000029783 530 1.848 0.910 - - - - - - 0.938 - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
50. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.843 - 0.996 - - - - - - 0.847 v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
51. gpcpd1 ENSDARG00000016011 2563 1.842 0.915 - - - - - - 0.927 - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
52. pinx1 ENSDARG00000023532 4452 1.841 - - 0.915 - - - - 0.926 - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
53. ces3 ENSDARG00000041595, ENSDARG00000114555 647 1.839 0.917 - - - - 0.922 - - - carboxylesterase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9563]
54. TSSC4 ENSDARG00000036144 1994 1.835 0.879 - - - - - - 0.956 - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
55. ncalda ENSDARG00000070688 5069 1.835 - - 0.910 - - - - 0.925 - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
56. mid1ip1l ENSDARG00000018145 2789 1.828 - - - - - 0.962 0.866 - - MID1 interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-1697]
57. isca1 ENSDARG00000051956 5855 1.823 - - 0.901 - - 0.922 - - - iron-sulfur cluster assembly 1 [Source:ZFIN;Acc:ZDB-GENE-050626-94]
58. srp19 ENSDARG00000035699 2624 1.821 0.855 - 0.966 - - - - - - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
59. SLC12A7 SLC12A7 1702 1.817 - - - - - 0.867 - 0.950 -
60. sec22a ENSDARG00000078328 1207 1.816 0.857 - 0.959 - - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
61. dcxr ENSDARG00000079271 3289 1.812 - 0.995 - - - 0.817 - - - dicarbonyl/L-xylulose reductase [Source:ZFIN;Acc:ZDB-GENE-030131-7002]
62. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 1.809 - - - - - 0.942 0.867 - - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
63. CU469577.1 ENSDARG00000102850 1232 1.808 0.871 - - - - 0.937 - - -
64. U6 U6 931 1.808 - - - - - - - 0.938 0.870
65. vta1 ENSDARG00000013732 6072 1.806 0.846 - 0.960 - - - - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
66. mcfd2 ENSDARG00000039757, ENSDARG00000109631, ENSDARG00000116502 1804 1.797 0.804 0.993 - - - - - - - multiple coagulation factor deficiency 2 [Source:ZFIN;Acc:ZDB-GENE-041010-8]
67. THEM4 ENSDARG00000061621 364 1.791 - - - - - - - 0.936 0.855 thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
68. fbp1b ENSDARG00000020364, ENSDARG00000111266 10050 1.79 - - - - - 0.922 0.868 - - fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
69. GATAD2B ENSDARG00000005834 3855 1.785 - - 0.895 - - - - 0.890 - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
70. RNF5 ENSDARG00000075606 1730 1.784 0.913 - - - - - - - 0.871 ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
71. sidt2 ENSDARG00000045976 1997 1.784 - - - - - 0.894 0.890 - - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
72. cyp2aa4 ENSDARG00000098803 1762 1.784 - - - - - 0.945 0.839 - - cytochrome P450, family 2, subfamily AA, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-040625-72]
73. ass1 8099 1.78 - - 0.885 - - 0.895 - - - argininosuccinate synthase 1
74. EPS8L2 ENSDARG00000058108 484 1.777 0.924 - - - - 0.853 - - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
75. AP3B2 1874 1.776 - - - - 0.861 - - 0.915 - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
76. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.774 - - 0.948 - - - - 0.826 - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
77. atp6v1d ENSDARG00000011175 8331 1.769 - - - - - 0.814 - 0.955 - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
78. ctsla ENSDARG00000007836 67814 1.767 - - - - - 0.899 0.868 - - cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
79. atp2a3 ENSDARG00000060978 1408 1.765 0.915 - - - - - - - 0.850 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
80. spryd7a ENSDARG00000052624 1059 1.761 0.882 - - - - - - 0.879 - SPRY domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-040426-2713]
81. znf207a ENSDARG00000015538 2630 1.759 0.811 - 0.948 - - - - - - zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
82. abl1 ENSDARG00000035187 3553 1.758 - 0.992 - - 0.766 - - - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
83. ZPLXDC2 ZPLXDC2 1298 1.758 - 0.796 0.962 - - - - - -
84. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 1.757 - - - - - - - 0.893 0.864 solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
85. txn ENSDARG00000044125, ENSDARG00000116040 4758 1.757 - - - - - 0.906 0.851 - - thioredoxin [Source:ZFIN;Acc:ZDB-GENE-040718-162]
86. PRPSAP1 ENSDARG00000099222 1249 1.756 - - - - - 0.935 0.821 - - phosphoribosyl pyrophosphate synthetase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040704-40]
87. TBC1D24 ENSDARG00000069339 1300 1.755 - 0.990 - - - 0.765 - - - TBC1 domain family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050809-65]
88. znf259 znf259 1819 1.748 0.793 - 0.955 - - - - - -
89. creb3l3 creb3l3 1981 1.745 - - - - - 0.916 0.829 - -
90. rbm8a ENSDARG00000016516 8789 1.745 - - - - - - - 0.840 0.905 RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
91. rqcd1 2301 1.744 - - 0.966 - 0.778 - - - - RCD1 required for cell differentiation1 homolog (S. pombe)
92. apom ENSDARG00000076838 4732 1.742 - - - - - 0.867 0.875 - - apolipoprotein M [Source:ZFIN;Acc:ZDB-GENE-010605-5]
93. urah urah 4152 1.74 0.875 - - - - 0.865 - - -
94. dido1 ENSDARG00000057940 3819 1.738 - - - - 0.829 - - 0.909 - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
95. dlg5a ENSDARG00000074059 1834 1.737 0.872 - - - - - - - 0.865 discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
96. gm2a ENSDARG00000088439 5387 1.736 0.801 - - - - - 0.935 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
97. C3_2 C3_2 1084 1.734 - - - - - 0.881 0.853 - -
98. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 1.734 - - - - - - 0.878 - 0.856 ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
99. camk2n1a ENSDARG00000025855 1467 1.733 0.903 - - - - 0.830 - - - calcium/calmodulin-dependent protein kinase II inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-319]
100. vtnb ENSDARG00000053831 2364 1.732 - - - - - 0.885 0.847 - - vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]

There are 2213 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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