Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nmd3

Gene Name Gene ID Reads Annotation
nmd3 ENSDARG00000015676 303 NMD3 ribosome export adaptor [Source:ZFIN;Acc:ZDB-GENE-050320-149]










Genes with expression patterns similar to nmd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nmd3 ENSDARG00000015676 303 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NMD3 ribosome export adaptor [Source:ZFIN;Acc:ZDB-GENE-050320-149]
2. pigu ENSDARG00000075530 348 1.718 - 0.889 - 0.829 - - - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
3. CR318593.1 CR318593.1 290 1.648 0.915 - - - - 0.733 - - -
4. agpat9 agpat9 938 1.645 - 0.876 - - - - 0.769 - -
5. gal3st1 gal3st1 108 1.63 - - - 0.838 - 0.792 - - -
6. C25H12orf73 C25H12orf73 2031 1.626 - 0.837 - - - - 0.789 - -
7. tek ENSDARG00000028663 167 1.624 - - - 0.890 - - 0.734 - - TEK tyrosine kinase, endothelial [Source:ZFIN;Acc:ZDB-GENE-990415-56]
8. ino80e ENSDARG00000022939, ENSDARG00000101892 216 1.622 - 0.807 - - - 0.815 - - - INO80 complex subunit E [Source:ZFIN;Acc:ZDB-GENE-040426-1818]
9. pycrl pycrl 80 1.607 - 0.841 - - - 0.766 - - -
10. otud4 ENSDARG00000077810 120 1.606 - 0.863 - - - 0.743 - - - OTU deubiquitinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5338]
11. grip2a ENSDARG00000087187 401 1.594 - 0.795 - 0.799 - - - - - glutamate receptor interacting protein 2a [Source:ZFIN;Acc:ZDB-GENE-081104-132]
12. mrps23 ENSDARG00000033973 2265 1.589 - 0.837 - - - - 0.752 - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
13. rock2b ENSDARG00000004877, ENSDARG00000096433 135 1.585 0.735 0.850 - - - - - - - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
14. fam208ab ENSDARG00000013346, ENSDARG00000113202 538 1.582 - 0.821 - - - 0.761 - - - family with sequence similarity 208, member Ab [Source:ZFIN;Acc:ZDB-GENE-090311-29]
15. ssna1 ENSDARG00000101300 403 1.579 - 0.802 - 0.777 - - - - - Sjogren syndrome nuclear autoantigen 1 [Source:ZFIN;Acc:ZDB-GENE-081104-255]
16. prcp ENSDARG00000037883 473 1.576 - 0.807 - - - 0.769 - - - prolylcarboxypeptidase (angiotensinase C) [Source:ZFIN;Acc:ZDB-GENE-040718-447]
17. stab1 ENSDARG00000076484 717 1.576 - 0.833 - - - - 0.743 - - stabilin 1 [Source:ZFIN;Acc:ZDB-GENE-050208-554]
18. mcm10 ENSDARG00000045815 196 1.567 0.701 0.866 - - - - - - - minichromosome maintenance 10 replication initiation factor [Source:ZFIN;Acc:ZDB-GENE-041210-42]
19. gng13b ENSDARG00000037921 215 1.563 0.731 - - 0.832 - - - - - guanine nucleotide binding protein (G protein), gamma 13b [Source:ZFIN;Acc:ZDB-GENE-040718-97]
20. GALNT3 ENSDARG00000108649 356 1.561 0.709 - - 0.852 - - - - - polypeptide N-acetylgalactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:4125]
21. NOG NOG 324 1.561 - 0.779 - - - - 0.782 - -
22. she ENSDARG00000087956 941 1.558 - 0.793 - - - - 0.765 - - Src homology 2 domain containing E [Source:ZFIN;Acc:ZDB-GENE-090915-6]
23. mgmt ENSDARG00000043275, ENSDARG00000111616 169 1.555 - 0.735 - 0.820 - - - - - O-6-methylguanine-DNA methyltransferase [Source:ZFIN;Acc:ZDB-GENE-120614-1]
24. CU929417.2 CU929417.2 94 1.549 0.747 - - 0.802 - - - - -
25. clec14a ENSDARG00000103533 718 1.549 - - - - - 0.718 0.831 - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
26. tbc1d22a ENSDARG00000045510 363 1.542 0.729 0.813 - - - - - - - TBC1 domain family, member 22a [Source:ZFIN;Acc:ZDB-GENE-041114-144]
27. slc20a1a ENSDARG00000020114, ENSDARG00000113616 503 1.541 - 0.805 - - - - 0.736 - - solute carrier family 20, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2217]
28. THEM4 ENSDARG00000061621 364 1.535 - 0.734 - - - - 0.801 - - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
29. fbxo8 ENSDARG00000007477 603 1.531 - 0.757 - - - - 0.774 - - F-box protein 8 [Source:ZFIN;Acc:ZDB-GENE-060421-7091]
30. THOP1 ENSDARG00000013776 2717 1.529 - 0.797 - - - - 0.732 - - thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
31. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 1.528 - 0.761 - - - - 0.767 - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
32. fam174b ENSDARG00000068709 1171 1.522 - 0.705 - - - - 0.817 - - family with sequence similarity 174, member B [Source:ZFIN;Acc:ZDB-GENE-050419-78]
33. ptprb ENSDARG00000076624 323 1.505 - 0.703 - - - - 0.802 - - protein tyrosine phosphatase, receptor type, b [Source:ZFIN;Acc:ZDB-GENE-101108-3]
34. CPLX1 CPLX1 386 1.495 0.733 - - 0.762 - - - - -
35. ZNF385D ENSDARG00000086162 202 1.492 0.765 0.727 - - - - - - - zinc finger protein 385D [Source:ZFIN;Acc:ZDB-GENE-130201-2]
36. ddx20 ENSDARG00000061204 477 1.489 0.754 - - - - - 0.735 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-030131-202]
37. FSD2 518 1.488 0.770 - - - - - 0.718 - - fibronectin type III and SPRY domain containing 2
38. galk2 ENSDARG00000004059 122 1.485 0.767 - - - - - 0.718 - - galactokinase 2 [Source:ZFIN;Acc:ZDB-GENE-041114-143]
39. tmem161b ENSDARG00000055989 680 1.481 - - - 0.703 - - 0.778 - - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
40. cyp1a ENSDARG00000098315 273 1.475 - 0.751 - - - - 0.724 - - cytochrome P450, family 1, subfamily A [Source:ZFIN;Acc:ZDB-GENE-011219-1]
41. kcng4 kcng4 37 1.47 - 0.734 - - - 0.736 - - -
42. noc4l ENSDARG00000045565 1337 1.468 - - - - - 0.704 0.764 - - nucleolar complex associated 4 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-98]
43. SPOP ENSDARG00000100519 52 1.465 0.729 - - - - 0.736 - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
44. ttll9 ENSDARG00000062806 89 1.462 - 0.730 - - - 0.732 - - - tubulin tyrosine ligase-like family, member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1582]
45. adamts10 ENSDARG00000075188 225 1.454 0.741 0.713 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 10 [Source:ZFIN;Acc:ZDB-GENE-081104-414]
46. IPO11 ENSDARG00000054224 616 1.454 0.750 - - - - 0.704 - - - importin 11 [Source:ZFIN;Acc:ZDB-GENE-040711-1]
47. aplnrb ENSDARG00000036670 546 1.446 - 0.736 - - - 0.710 - - - apelin receptor b [Source:ZFIN;Acc:ZDB-GENE-050913-90]
48. CABZ01066957.1 CABZ01066957.1 161 1.439 - 0.719 - - - - 0.720 - -
49. immp2l ENSDARG00000004925 215 1.438 - 0.708 - - - - 0.730 - - inner mitochondrial membrane peptidase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040808-9]
50. ccdc104 ccdc104 248 1.433 - - - 0.718 - 0.715 - - -
51. spata18 ENSDARG00000052343 216 1.422 - 0.706 - - - - 0.716 - - spermatogenesis associated 18 [Source:ZFIN;Acc:ZDB-GENE-050522-306]
52. il13ra2 ENSDARG00000039436, ENSDARG00000111925 286 1.414 - - - - - 0.704 0.710 - - interleukin 13 receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030521-10]
53. wdr75 ENSDARG00000040730 1247 1.411 - - - 0.704 - - 0.707 - - WD repeat domain 75 [Source:ZFIN;Acc:ZDB-GENE-030616-5]
54. gfm1 ENSDARG00000063624 523 1.407 - 0.704 0.703 - - - - - - G elongation factor, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-061013-79]
55. tbc1d10a tbc1d10a 462 0.916 - 0.916 - - - - - - -
56. si:ch211-245h7.2 si:ch211-245h7.2 317 0.912 - - - - - - 0.912 - -
57. pi4kab ENSDARG00000062823 197 0.907 0.907 - - - - - - - - phosphatidylinositol 4-kinase, catalytic, alpha b [Source:ZFIN;Acc:ZDB-GENE-080220-34]
58. AL928712.1 AL928712.1 101 0.899 - 0.899 - - - - - - -
59. si:ch211-85n16.3 ENSDARG00000096346 1095 0.896 - - - - - - 0.896 - - si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
60. DIDO1 ENSDARG00000057940 312 0.894 - 0.894 - - - - - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
61. timeless ENSDARG00000078497 1114 0.89 - 0.890 - - - - - - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
62. hccsa hccsa 869 0.89 - - - - - - 0.890 - -
63. gadd45aa ENSDARG00000043581 114 0.878 - 0.878 - - - - - - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
64. C1QBP ENSDARG00000039887 11186 0.877 - - - - - - 0.877 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
65. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 0.876 - 0.876 - - - - - - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
66. si:ch211-284e13.5 ENSDARG00000094725 68 0.875 - 0.875 - - - - - - - si:ch211-284e13.5 [Source:ZFIN;Acc:ZDB-GENE-060526-162]
67. CT737138.1 CT737138.1 26 0.87 0.870 - - - - - - - -
68. senp3b ENSDARG00000056741 1296 0.87 - 0.870 - - - - - - - SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
69. dph1 ENSDARG00000057973 191 0.869 - 0.869 - - - - - - - diphthamide biosynthesis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-411]
70. PDGFB_1 PDGFB_1 139 0.869 - 0.869 - - - - - - -
71. PDPR ENSDARG00000103288 711 0.868 - - - - - - 0.868 - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
72. pih1d1 ENSDARG00000037955 301 0.867 - - - 0.867 - - - - - PIH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-147]
73. mntb ENSDARG00000073988 1023 0.866 - 0.866 - - - - - - - MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
74. dhps ENSDARG00000003270 827 0.866 - 0.866 - - - - - - - deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
75. mrps18a ENSDARG00000024465 5187 0.865 - - - - - - 0.865 - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
76. si:dkey-260j18.2 ENSDARG00000101942 450 0.863 0.863 - - - - - - - - si:dkey-260j18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3956]
77. ZNF76 ENSDARG00000013279 260 0.862 - - - 0.862 - - - - - zinc finger protein 76 [Source:ZFIN;Acc:ZDB-GENE-061027-379]
78. rorab ENSDARG00000001910, ENSDARG00000109324, ENSDARG00000113275 518 0.862 - - - 0.862 - - - - - RAR-related orphan receptor A, paralog b [Source:ZFIN;Acc:ZDB-GENE-040426-855]
79. sirt1 ENSDARG00000068064 1393 0.859 0.859 - - - - - - - - sirtuin 1 [Source:ZFIN;Acc:ZDB-GENE-070801-2]
80. hsd17b10 ENSDARG00000017781 1793 0.859 - - - - - - 0.859 - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
81. MRPL52 ENSDARG00000090568 4402 0.859 - - - - - - 0.859 - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
82. rnf216 ENSDARG00000087893 518 0.859 - 0.859 - - - - - - - ring finger protein 216 [Source:ZFIN;Acc:ZDB-GENE-081104-199]
83. LDLRAD4 LDLRAD4 1237 0.857 - 0.857 - - - - - - -
84. ptpn22 ENSDARG00000104197 266 0.856 - - - - - 0.856 - - - protein tyrosine phosphatase, non-receptor type 22 [Source:ZFIN;Acc:ZDB-GENE-060503-458]
85. tssc1 tssc1 416 0.855 - 0.855 - - - - - - -
86. nudt22 ENSDARG00000071671 411 0.855 - - - 0.855 - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 22 [Source:ZFIN;Acc:ZDB-GENE-041010-171]
87. ENSDARG00000023499 ENSDARG00000023499 395 0.855 - 0.855 - - - - - - -
88. CU638738.1 CU638738.1 131 0.854 - 0.854 - - - - - - -
89. PRIMA1 PRIMA1 459 0.854 - 0.854 - - - - - - -
90. mrps2 ENSDARG00000103198 2410 0.853 - - - - - - 0.853 - - mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
91. prickle1a ENSDARG00000040649 700 0.853 - - - - - - 0.853 - - prickle homolog 1a [Source:ZFIN;Acc:ZDB-GENE-030724-5]
92. pfkfb1 ENSDARG00000037140 182 0.853 - - - 0.853 - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
93. nostrin ENSDARG00000077866 85 0.852 - 0.852 - - - - - - - nitric oxide synthase trafficking [Source:ZFIN;Acc:ZDB-GENE-070522-2]
94. rwdd1 ENSDARG00000015930 2380 0.852 - - - - - - 0.852 - - RWD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-270]
95. aanat1 ENSDARG00000036567 176 0.851 0.851 - - - - - - - - arylalkylamine N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040329-1]
96. podxl ENSDARG00000031228 1744 0.851 - 0.851 - - - - - - - podocalyxin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2805]
97. lmx1a ENSDARG00000020354 111 0.85 - - - 0.850 - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
98. dclre1b ENSDARG00000068833 359 0.85 - 0.850 - - - - - - - DNA cross-link repair 1B [Source:ZFIN;Acc:ZDB-GENE-061013-328]
99. lrrc42 ENSDARG00000030591 156 0.849 - - - 0.849 - - - - - leucine rich repeat containing 42 [Source:ZFIN;Acc:ZDB-GENE-030131-4992]
100. cep85l ENSDARG00000020777 1121 0.848 - 0.848 - - - - - - - centrosomal protein 85, like [Source:ZFIN;Acc:ZDB-GENE-041014-309]

There are 1145 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA