Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nmbb

Gene Name Gene ID Reads Annotation
nmbb ENSDARG00000077167, ENSDARG00000115224 45 neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]










Genes with expression patterns similar to nmbb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nmbb ENSDARG00000077167, ENSDARG00000115224 45 7 - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
2. NPAS3 ENSDARG00000109820 362 2.749 - 1.000 - - 0.975 0.774 - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
3. CABZ01072828.1 CABZ01072828.1 67 2.44 - 0.889 0.753 - 0.798 - - - -
4. KCNS3 KCNS3 82 1.982 - 1.000 - - 0.982 - - - -
5. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1.943 - 1.000 0.943 - - - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
6. cacng3b ENSDARG00000076401 91 1.917 - 1.000 - - - 0.917 - - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
7. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1.914 - 1.000 - - - 0.914 - - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
8. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 1.889 - 1.000 - - - 0.889 - - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
9. tmem179 ENSDARG00000013292 343 1.868 - 0.946 - - - 0.922 - - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
10. GJD2_1 GJD2_1 3045 1.865 - 1.000 - - - 0.865 - - -
11. neflb ENSDARG00000012426 298 1.865 - 1.000 - - - 0.865 - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
12. otpb ENSDARG00000058379 1143 1.841 - 1.000 - - - 0.841 - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
13. jph3 ENSDARG00000102204 175 1.83 - 1.000 - - - 0.830 - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
14. FUT9 FUT9 91 1.817 - 1.000 - - - 0.817 - - -
15. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.812 - 1.000 - - - 0.812 - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
16. syt12 ENSDARG00000101776 215 1.809 - - - - 0.855 0.954 - - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
17. CU138503.3 CU138503.3 31 1.804 - 1.000 - - - - - 0.804 -
18. prok1 ENSDARG00000073948, ENSDARG00000114411 26 1.801 - - 1.000 - - 0.801 - - - prokineticin 1 [Source:ZFIN;Acc:ZDB-GENE-070928-34]
19. XRCC2 ENSDARG00000013933 15 1.797 - 1.000 - 0.797 - - - - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
20. fam219ab ENSDARG00000013813 591 1.79 - 1.000 - - - 0.790 - - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
21. CHRNB4 ENSDARG00000101677 128 1.79 - 0.946 - - - 0.844 - - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
22. gng3 ENSDARG00000009553 2530 1.785 - 0.929 - - - 0.856 - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
23. si:ch73-127m5.1 ENSDARG00000060680 253 1.781 - 1.000 - - - 0.781 - - - si:ch73-127m5.1 [Source:ZFIN;Acc:ZDB-GENE-130531-25]
24. ccdc14 ENSDARG00000098734 3 1.78 - 1.000 - 0.780 - - - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
25. AGAP2 ENSDARG00000099874 151 1.779 - 1.000 - - - 0.779 - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 [Source:ZFIN;Acc:ZDB-GENE-061103-343]
26. USP43 USP43 14 1.778 - 1.000 - - - - - 0.778 -
27. zgc:173713 17 1.772 - 1.000 - - - 0.772 - - - zgc:173713, transcript variant X2
28. penka ENSDARG00000004869 161 1.769 - 0.991 - - - 0.778 - - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
29. syt11b ENSDARG00000056105 578 1.751 - 0.974 - - - 0.777 - - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
30. si:dkey-106c17.1 si:dkey-106c17.1 26 1.748 - 1.000 - - - - - 0.748 -
31. ptf1a ENSDARG00000014479 349 1.735 - 1.000 - - - 0.735 - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
32. porcn ENSDARG00000052558, ENSDARG00000111556 110 1.732 - 1.000 - - - 0.732 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
33. tagln3a ENSDARG00000079805 123 1.722 - 1.000 - - - 0.722 - - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
34. RFESD ENSDARG00000058725 27 1.708 - - 0.731 - 0.977 - - - - Rieske (Fe-S) domain containing [Source:ZFIN;Acc:ZDB-GENE-050417-254]
35. scn2b ENSDARG00000101713 796 1.707 - 0.909 - - - 0.798 - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
36. zic6 ENSDARG00000071496 402 1.706 - 0.907 - - - 0.799 - - - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
37. cdh10 cdh10 38 1.706 - 1.000 - 0.706 - - - - -
38. MCF2L2 ENSDARG00000079742 52 1.701 - 1.000 - - - 0.701 - - - MCF.2 cell line derived transforming sequence-like 2 [Source:ZFIN;Acc:ZDB-GENE-100812-1]
39. dbx2 2971 1.697 - 0.781 - - - 0.916 - - - developing brain homeobox 2
40. CU179656.1 ENSDARG00000107086 270 1.684 - 0.969 - - - 0.715 - - -
41. CABZ01080599.2 CABZ01080599.2 192 1.676 - - - - 0.915 0.761 - - -
42. rap2ip rap2ip 681 1.668 - 0.907 - - - 0.761 - - -
43. HSPA4L ENSDARG00000053544 363 1.667 - 0.826 - - 0.841 - - - - heat shock protein 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-2412]
44. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.659 - 0.783 - - - 0.876 - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
45. rbfox3 rbfox3 1443 1.653 - 0.833 - - - 0.820 - - -
46. syngr3a ENSDARG00000014871 405 1.639 - 0.806 - - - 0.833 - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
47. bgnb ENSDARG00000002945, ENSDARG00000110495 76 1.632 - - - - 0.928 0.704 - - - biglycan b [Source:ZFIN;Acc:ZDB-GENE-040426-21]
48. lhx1a ENSDARG00000014018 958 1.622 - 0.903 - - - 0.719 - - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
49. plxnb3 ENSDARG00000032990 98 1.616 - - - - 0.900 0.716 - - - plexin B3 [Source:ZFIN;Acc:ZDB-GENE-081104-53]
50. NPPC_1 NPPC_1 11 1.614 - 0.881 - - - - - 0.733 -
51. adat1 ENSDARG00000061348 62 1.613 - - - - 0.895 - - 0.718 - adenosine deaminase, tRNA-specific 1 [Source:ZFIN;Acc:ZDB-GENE-070410-64]
52. st3gal2 ENSDARG00000112898 370 1.603 - 0.742 - - - 0.861 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
53. vamp1 ENSDARG00000031283 3094 1.595 - - - - 0.773 0.822 - - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
54. PRKAR2B ENSDARG00000036446 812 1.579 - - - - 0.819 0.760 - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
55. nes ENSDARG00000088805 2710 1.576 - 0.770 - - - 0.806 - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
56. stx1b ENSDARG00000000503 2724 1.572 - 0.814 - - - 0.758 - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
57. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.567 - 0.713 - - - 0.854 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
58. jag1a ENSDARG00000030289 1275 1.564 - 0.736 - - - 0.828 - - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
59. pcdh2ac ENSDARG00000099783 325 1.562 - 0.710 - - - 0.852 - - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
60. lgi2a ENSDARG00000111069 965 1.557 - 0.743 - - - 0.814 - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
61. nova2 ENSDARG00000017673 7685 1.545 - 0.708 - - - 0.837 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
62. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.541 - 0.704 - - - 0.837 - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
63. KCNB2 ENSDARG00000088842 35 1.535 - 0.806 - - - 0.729 - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
64. CHL1 CHL1 1553 1.532 - 0.723 - - - 0.809 - - -
65. PRRT3 PRRT3 195 1.531 - - - - 0.755 0.776 - - -
66. slc1a2b ENSDARG00000102453 3136 1.531 - 0.829 - - - 0.702 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
67. scn8aa ENSDARG00000005775 792 1.52 - 0.754 - - - 0.766 - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
68. si:dkey-1d7.3 ENSDARG00000075837 18 1.475 - - - - - 0.768 - 0.707 - si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46]
69. LRRN3 LRRN3 261 1.472 - 0.752 - - - 0.720 - - -
70. rufy3 ENSDARG00000029692 3031 1.466 - 0.746 - - - 0.720 - - - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
71. csf1b ENSDARG00000068263 248 1.439 - 0.714 - - - 0.725 - - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
72. si:ch211-204c5.6 si:ch211-204c5.6 7 1 - 1.000 - - - - - - -
73. si:dkey-285e18.6 ENSDARG00000098144 1 1 - 1.000 - - - - - - - si:dkey-285e18.6 [Source:ZFIN;Acc:ZDB-GENE-120709-86]
74. HIST1H2BA ENSDARG00000116654 10 1 - 1.000 - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
75. si:dkey-200l5.4 ENSDARG00000095294 13 1 - 1.000 - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
76. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - 1.000 - - - - - - -
77. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1 - 1.000 - - - - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
78. si:ch211-218c6.9 si:ch211-218c6.9 40 1 - 1.000 - - - - - - -
79. BX548000.1 ENSDARG00000099044 45 1 - 1.000 - - - - - - -
80. rereb ENSDARG00000075670 136 1 - 1.000 - - - - - - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
81. BX572078.1 ENSDARG00000099083 1 1 - 1.000 - - - - - - -
82. foxq1a ENSDARG00000030896 121 1 - 1.000 - - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
83. htr3a ENSDARG00000089212 51 1 - 1.000 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
84. lingo1b ENSDARG00000035899 86 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
85. BX004964.2 BX004964.2 1 1 - 1.000 - - - - - - -
86. ABCA7 ABCA7 12 1 - 1.000 - - - - - - -
87. BX537305.1 ENSDARG00000113834 10 1 - 1.000 - - - - - - -
88. camk1db ENSDARG00000017446 47 1 - 1.000 - - - - - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
89. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - 1.000 - - - - - - -
90. si:dkey-93h22.6 si:dkey-93h22.6 7 1 - 1.000 - - - - - - -
91. pvrl4 155 1 - 1.000 - - - - - - - poliovirus receptor-related 4
92. gfra3 ENSDARG00000087704 122 1 - 1.000 - - - - - - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
93. atxn1b ENSDARG00000060862 345 1 - 1.000 - - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
94. gucy1b3 92 1 - 1.000 - - - - - - - guanylate cyclase 1, soluble, beta 3
95. baiap2l1b ENSDARG00000031119 71 1 - 1.000 - - - - - - - BAI1-associated protein 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-050417-371]
96. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 1 - 1.000 - - - - - - - retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
97. KCNG2 ENSDARG00000035961 58 1 - 1.000 - - - - - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
98. si:dkey-220a11.9 si:dkey-220a11.9 10 1 - 1.000 - - - - - - -
99. CLSTN2 ENSDARG00000060637 41 1 - 1.000 - - - - - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
100. ascc2 ENSDARG00000013058 228 1 - 1.000 - - - - - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]

There are 1203 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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