Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nlgn3a

Gene Name Gene ID Reads Annotation
nlgn3a ENSDARG00000104786 91 neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]










Genes with expression patterns similar to nlgn3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nlgn3a ENSDARG00000104786 91 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
2. GADD45G_1 GADD45G_1 236 2.532 - 0.740 - - - 0.859 0.933 - -
3. sez6l ENSDARG00000100594 35 2.504 - 0.740 - - - 0.823 0.941 - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
4. BX005294.2 ENSDARG00000109361 3 2.464 - 0.740 - - - 0.783 0.941 - -
5. PRR12 PRR12 38 2.435 - 0.740 - - - 0.754 0.941 - -
6. PEX5L PEX5L 179 2.387 - - 0.750 0.901 - 0.736 - - -
7. pcyt1ba ENSDARG00000058162 206 2.382 - 0.740 - - - 0.885 0.757 - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
8. chrna6 ENSDARG00000055559 60 2.32 - 0.740 - - - 0.709 0.871 - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
9. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1.86 - - - 0.923 - - 0.937 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
10. C17H15orf41 C17H15orf41 313 1.804 - 0.962 - 0.842 - - - - -
11. ptf1a ENSDARG00000014479 349 1.786 - - - - - 0.845 0.941 - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
12. tbkbp1 ENSDARG00000061473 24 1.771 - - - - - 0.830 0.941 - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
13. si:ch211-199m9.3 50 1.758 0.907 - - 0.851 - - - - - si:ch211-199m9.3, transcript variant X3
14. lrp2a ENSDARG00000102506 212 1.749 - 0.859 - - - - 0.890 - - low density lipoprotein receptor-related protein 2a [Source:ZFIN;Acc:ZDB-GENE-050119-2]
15. fsd1 ENSDARG00000062017 207 1.741 - 0.979 - - - 0.762 - - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
16. glrba ENSDARG00000052782, ENSDARG00000117018 4 1.74 - 0.907 - - - - 0.833 - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
17. CR388042.1 ENSDARG00000106267 18 1.73 0.866 - - - - - 0.864 - -
18. prdm13 ENSDARG00000078701 205 1.717 - - - - - 0.884 0.833 - - PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
19. ptprnb ENSDARG00000077047 2743 1.715 - 0.851 - - - - 0.864 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
20. calca ENSDARG00000056590 150 1.713 - 0.978 - - - 0.735 - - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
21. BX936443.2 BX936443.2 28 1.711 - 0.770 - - - - 0.941 - -
22. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.707 - 0.948 - - - - 0.759 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
23. b3galnt2 ENSDARG00000046133 68 1.706 - 0.873 - - - - 0.833 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
24. mfsd2b ENSDARG00000030263 12 1.702 - - - - 0.761 - 0.941 - - major facilitator superfamily domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041210-308]
25. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.69 - 0.907 - - - - 0.783 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
26. nfatc1 ENSDARG00000036168 16 1.69 - - - - 0.749 - 0.941 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
27. MCTP1 MCTP1 219 1.683 - 0.830 - - - - 0.853 - -
28. si:ch211-57m13.9 ENSDARG00000095884 10 1.681 - 0.740 - - - - 0.941 - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
29. prl ENSDARG00000037946 80 1.681 - 0.740 - - - - 0.941 - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
30. pcyox1 ENSDARG00000103052 20 1.681 - 0.740 - - - - 0.941 - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
31. kif20a ENSDARG00000044491 12 1.681 - 0.740 - - - - 0.941 - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
32. si:dkey-199m13.8 si:dkey-199m13.8 61 1.681 - 0.740 - - - - 0.941 - -
33. si:dkey-100n10.2 101 1.679 - 0.740 - - - - 0.939 - - si:dkey-100n10.2
34. wu:fe36b12 wu:fe36b12 118 1.679 - 0.841 - - - 0.838 - - -
35. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 1.678 - 0.895 - - - 0.783 - - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
36. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 1.676 - 0.914 - - - - 0.762 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
37. unc13c 197 1.674 - 0.938 - - - - 0.736 - - unc-13 homolog C (C. elegans)
38. st3gal2 ENSDARG00000112898 370 1.673 - 0.899 - - - - 0.774 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
39. si:ch211-117c9.5 ENSDARG00000071235 154 1.672 - - - 0.768 - - 0.904 - - si:ch211-117c9.5 [Source:ZFIN;Acc:ZDB-GENE-110408-2]
40. 5S_rRNA_7 5S_rRNA_7 55 1.67 - 0.916 - - - 0.754 - - -
41. nhlh2 ENSDARG00000025495 1860 1.667 - 0.909 - - - 0.758 - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
42. KCNB2 ENSDARG00000088842 35 1.667 - - - 0.913 - 0.754 - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
43. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1.667 0.726 - - - - - 0.941 - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
44. CDH12 CDH12 44 1.665 - - - - - 0.828 0.837 - -
45. fat3a ENSDARG00000033840 902 1.664 - 0.907 - - - - 0.757 - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
46. sc:d0139 sc:d0139 233 1.664 - - 0.826 0.838 - - - - -
47. CCSAP CCSAP 147 1.663 - 0.742 - - - - 0.921 - -
48. si:ch211-223a21.3 ENSDARG00000104737 28 1.662 - - - - - - 0.941 - 0.721 si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
49. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1.662 0.726 0.936 - - - - - - - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
50. CIR1 ENSDARG00000099733 66 1.653 - 0.740 - 0.913 - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
51. her15.2 her15.2 1701 1.649 - 0.945 - - - - 0.704 - -
52. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1.648 - 0.774 - - - 0.874 - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
53. her13 ENSDARG00000007097 2000 1.648 - 0.855 - - - - 0.793 - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
54. ncam1b ENSDARG00000007220 233 1.646 - - - 0.902 - 0.744 - - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
55. CU463790.1 CU463790.1 60 1.646 - 0.743 - 0.903 - - - - -
56. npdc1 npdc1 221 1.645 0.726 - - 0.919 - - - - -
57. zgc:100906 ENSDARG00000033599 344 1.642 - 0.872 - - - - 0.770 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
58. diras1a ENSDARG00000028066 126 1.641 - - - - - 0.783 0.858 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
59. SMARCA4 ENSDARG00000104339 48 1.64 - 0.740 - 0.900 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
60. FAXC FAXC 102 1.639 - 0.740 - - - 0.899 - - -
61. dbx2 2971 1.639 - 0.858 - - - 0.781 - - - developing brain homeobox 2
62. zgc:194665 ENSDARG00000004577 136 1.637 - - - - - 0.837 0.800 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
63. BX088603.3 ENSDARG00000117713 18 1.636 - - - 0.901 0.735 - - - -
64. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.634 - 0.890 - - - - 0.744 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
65. THEM6 ENSDARG00000103914 49 1.633 - - - - - 0.819 0.814 - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
66. CU915778.2 CU915778.2 194 1.633 0.726 0.907 - - - - - - -
67. chrna2a ENSDARG00000006602 163 1.632 - 0.774 - - - - 0.858 - - cholinergic receptor, nicotinic, alpha 2a (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-2]
68. gpr56 gpr56 523 1.627 - 0.784 - - - 0.843 - - -
69. RAB39B RAB39B 482 1.626 - - - - - 0.748 0.878 - -
70. rassf4 ENSDARG00000012460 43 1.626 - 0.740 - 0.886 - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
71. dlg2 ENSDARG00000099323 162 1.625 - 0.918 - - - 0.707 - - - discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
72. ATP6AP1L ATP6AP1L 164 1.623 - - - - - 0.869 0.754 - -
73. olig2 ENSDARG00000040946 1405 1.622 - 0.814 - - - - 0.808 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
74. slitrk2 ENSDARG00000006636 40 1.62 - - - - - 0.754 0.866 - - SLIT and NTRK-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-080327-7]
75. BRINP3 BRINP3 11 1.616 - - - - - 0.783 0.833 - -
76. shisa7 shisa7 181 1.608 - 0.711 - - - - 0.897 - -
77. pafah1b2 ENSDARG00000035352, ENSDARG00000114404 664 1.605 - - - - - 0.726 0.879 - - platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060526-43]
78. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.602 - 0.740 - 0.862 - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
79. gad1b ENSDARG00000027419 440 1.601 - 0.740 - - - - 0.861 - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
80. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 1.599 - 0.867 - - - - 0.732 - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
81. RNF208 ENSDARG00000078056 60 1.598 - - - - - 0.818 0.780 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
82. SMARCAD1 SMARCAD1 104 1.597 - - - 0.727 - - 0.870 - -
83. galr1 galr1 9 1.595 - 0.740 - - - - 0.855 - -
84. stx12l ENSDARG00000044605 99 1.593 - - - - - 0.735 0.858 - - syntaxin 12, like [Source:ZFIN;Acc:ZDB-GENE-110715-1]
85. cpeb1a ENSDARG00000045932 81 1.592 - 0.824 - 0.768 - - - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
86. BX247898.1 BX247898.1 75 1.59 - 0.770 - - - - 0.820 - -
87. cuedc1a ENSDARG00000068716 232 1.588 - - - - - 0.859 0.729 - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
88. ascl1a ENSDARG00000038386 1290 1.581 - 0.746 - - - - 0.835 - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
89. CABZ01021538.1 CABZ01021538.1 67 1.577 - 0.740 - - - - 0.837 - -
90. scg2a 800 1.576 - 0.828 - - - - 0.748 - - secretogranin II (chromogranin C) a
91. st18 663 1.573 - 0.872 - - - - 0.701 - - suppression of tumorigenicity 18, zinc finger
92. scn2b ENSDARG00000101713 796 1.569 - 0.762 - - - 0.807 - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
93. nrxn3b ENSDARG00000062693 192 1.569 - - - - 0.717 - 0.852 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
94. si:ch73-91k6.8 si:ch73-91k6.8 37 1.568 - - - - - 0.780 0.788 - -
95. fam188a 275 1.568 - - - 0.848 - 0.720 - - - family with sequence similarity 188, member A
96. trim36 ENSDARG00000062794 785 1.567 - - - 0.799 - 0.768 - - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
97. kctd1 ENSDARG00000074056 652 1.566 - 0.745 - 0.821 - - - - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
98. drgx ENSDARG00000069329 610 1.566 - - - - - 0.825 0.741 - - dorsal root ganglia homeobox [Source:ZFIN;Acc:ZDB-GENE-070330-1]
99. LRFN5_1 LRFN5_1 96 1.561 - - - - - 0.775 0.786 - -
100. SLC22A23_1 SLC22A23_1 308 1.56 - - - 0.725 - 0.835 - - -

There are 1747 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA