Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nle1

Gene Name Gene ID Reads Annotation
nle1 ENSDARG00000057105 522 notchless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050522-321]










Genes with expression patterns similar to nle1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nle1 ENSDARG00000057105 522 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 notchless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050522-321]
2. zgc:173726 ENSDARG00000077078 250 1.812 0.990 - - 0.822 - - - - - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
3. si:ch211-214e3.5 ENSDARG00000074270 755 1.808 0.968 0.840 - - - - - - - si:ch211-214e3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-19]
4. ddrgk1_1 ENSDARG00000037172 1563 1.784 0.962 0.822 - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
5. pold3 ENSDARG00000076169 694 1.775 0.940 - - 0.835 - - - - - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
6. asb6 ENSDARG00000007125 389 1.771 0.990 - - 0.781 - - - - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
7. entpd2a.2 ENSDARG00000033953 389 1.766 0.967 0.799 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
8. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 1.744 0.988 - - - - - - - 0.756 solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
9. pole ENSDARG00000058533, ENSDARG00000115430 381 1.743 0.981 0.762 - - - - - - - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
10. cmah ENSDARG00000057714 852 1.736 0.951 - - - - - 0.785 - - cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:ZFIN;Acc:ZDB-GENE-040704-33]
11. stm ENSDARG00000035694 1567 1.734 0.985 0.749 - - - - - - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
12. dgcr6 ENSDARG00000005500 479 1.729 0.976 - - - - - - - 0.753 DiGeorge syndrome critical region gene 6 [Source:ZFIN;Acc:ZDB-GENE-040912-125]
13. ARHGEF25 ARHGEF25 1159 1.714 0.927 0.787 - - - - - - -
14. si:ch211-161h7.4 ENSDARG00000087238 4399 1.709 0.881 - - 0.828 - - - - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
15. rrp7a ENSDARG00000098934 1123 1.649 0.948 - - 0.701 - - - - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
16. fam83b ENSDARG00000078309 318 1.646 0.840 0.806 - - - - - - - family with sequence similarity 83, member B [Source:ZFIN;Acc:ZDB-GENE-030131-7066]
17. zgc:173548 ENSDARG00000070048 558 1.62 - 0.819 - - - - 0.801 - - zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
18. luc7l ENSDARG00000055903 3357 1.617 0.780 0.837 - - - - - - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
19. zgc:193742 ENSDARG00000092387, ENSDARG00000115140, ENSDARG00000116906 653 1.615 0.863 0.752 - - - - - - - zgc:193742 [Source:ZFIN;Acc:ZDB-GENE-081022-37]
20. zgc:136892 ENSDARG00000069505 365 1.601 0.814 - - 0.787 - - - - - zgc:136892 [Source:ZFIN;Acc:ZDB-GENE-060421-4745]
21. nck2b ENSDARG00000043361 908 1.599 - 0.883 - - - - 0.716 - - NCK adaptor protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-235]
22. FP236168.1 FP236168.1 150 1.584 - 0.767 - - - - 0.817 - -
23. dre-mir-222a ENSDARG00000090347 131 1.57 - 0.850 - - - - 0.720 - - dre-mir-222a [Source:miRBase;Acc:MI0001388]
24. shc2 ENSDARG00000062080, ENSDARG00000111448 426 1.562 - 0.853 - - - - - - 0.709 SHC (Src homology 2 domain containing) transforming protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-666]
25. rft1 ENSDARG00000060398 146 1.555 - - - 0.798 - 0.757 - - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
26. vkorc1 ENSDARG00000086183 1212 1.555 0.855 0.700 - - - - - - - vitamin K epoxide reductase complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2286]
27. si:dkey-52k20.13 si:dkey-52k20.13 428 1.549 - 0.774 - - - - 0.775 - -
28. mapk8ip3 ENSDARG00000062531 631 1.548 - 0.833 - 0.715 - - - - - mitogen-activated protein kinase 8 interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-090303-6]
29. adhfe1 ENSDARG00000053518 499 1.547 - 0.721 - 0.826 - - - - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
30. mettl6 ENSDARG00000070085 366 1.547 - 0.827 - - - 0.720 - - - methyltransferase like 6 [Source:ZFIN;Acc:ZDB-GENE-040426-926]
31. fam173b ENSDARG00000033451 513 1.538 - 0.798 - - - - - - 0.740 family with sequence similarity 173, member B [Source:ZFIN;Acc:ZDB-GENE-041114-90]
32. map3k3 ENSDARG00000060348 1482 1.534 - 0.744 - 0.790 - - - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
33. emilin1b ENSDARG00000026166 1530 1.517 0.775 - - 0.742 - - - - - elastin microfibril interfacer 1b [Source:ZFIN;Acc:ZDB-GENE-060818-36]
34. C24H16orf11 C24H16orf11 32 1.516 - - - 0.779 - - 0.737 - -
35. si:dkey-192i18.3 si:dkey-192i18.3 47 1.516 - 0.810 - - - - - - 0.706
36. ARX ARX 71 1.512 - - - 0.810 - - - - 0.702
37. CR847906.1 ENSDARG00000099493 88 1.496 - - - - - - 0.738 - 0.758 protein NLRC3-like [Source:NCBI gene;Acc:571651]
38. CCNJ ENSDARG00000059917 115 1.491 - - - - - - 0.773 - 0.718 cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
39. ccdc174 ENSDARG00000023858 432 1.488 - - - 0.758 - - 0.730 - - coiled-coil domain containing 174 [Source:ZFIN;Acc:ZDB-GENE-050320-54]
40. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 1.487 0.771 0.716 - - - - - - - max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
41. FP085386.1 FP085386.1 229 1.485 - 0.732 - - - - 0.753 - -
42. fdx1l 461 1.469 - 0.716 - 0.753 - - - - - ferredoxin 1-like
43. zgc:91890 ENSDARG00000018980 198 1.465 - - - 0.737 - 0.728 - - - zgc:91890 [Source:ZFIN;Acc:ZDB-GENE-040704-21]
44. CABZ01081148.1 CABZ01081148.1 789 1.457 - 0.753 - - - - - - 0.704
45. ech1 ENSDARG00000012915, ENSDARG00000109720 1409 1.442 - 0.739 - 0.703 - - - - - enoyl CoA hydratase 1, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-041010-170]
46. TMEM151A ENSDARG00000077986 78 0.992 0.992 - - - - - - - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
47. tvp23b ENSDARG00000057060 361 0.992 0.992 - - - - - - - - trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-404]
48. gpr78 gpr78 135 0.992 0.992 - - - - - - - -
49. CABZ01020207.1 CABZ01020207.1 145 0.992 0.992 - - - - - - - -
50. lyst ENSDARG00000008575, ENSDARG00000113634 55 0.992 0.992 - - - - - - - - lysosomal trafficking regulator [Source:ZFIN;Acc:ZDB-GENE-070702-1]
51. RFESD_1 RFESD_1 65 0.992 0.992 - - - - - - - -
52. zgc:85932 ENSDARG00000098239 373 0.992 0.992 - - - - - - - - zgc:85932 [Source:ZFIN;Acc:ZDB-GENE-040426-2460]
53. si:dkey-164n2.1 47 0.991 0.991 - - - - - - - - si:dkey-164n2.1, transcript variant X1
54. baiap2l1a ENSDARG00000029305 30 0.991 0.991 - - - - - - - - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
55. exd3 ENSDARG00000063140 119 0.991 0.991 - - - - - - - - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
56. mnd1 ENSDARG00000074451 182 0.991 0.991 - - - - - - - - meiotic nuclear divisions 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-116]
57. C17H14orf1 C17H14orf1 256 0.991 0.991 - - - - - - - -
58. EPHA2 EPHA2 867 0.991 0.991 - - - - - - - -
59. TMEM220 ENSDARG00000088981 28 0.991 0.991 - - - - - - - - transmembrane protein 220 [Source:ZFIN;Acc:ZDB-GENE-131121-194]
60. taf12 ENSDARG00000104030, ENSDARG00000115004 163 0.991 0.991 - - - - - - - - TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-031030-5]
61. rnf152 ENSDARG00000087782 141 0.991 0.991 - - - - - - - - ring finger protein 152 [Source:ZFIN;Acc:ZDB-GENE-050327-84]
62. zgc:101562 ENSDARG00000040179 90 0.991 0.991 - - - - - - - - zgc:101562 [Source:ZFIN;Acc:ZDB-GENE-041010-74]
63. pou5f3 ENSDARG00000044774 212 0.991 0.991 - - - - - - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
64. si:ch211-229b6.1 ENSDARG00000093422 151 0.991 0.991 - - - - - - - - si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
65. moxd1 ENSDARG00000031136, ENSDARG00000111773 112 0.991 0.991 - - - - - - - - monooxygenase, DBH-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9320]
66. gne ENSDARG00000099771 617 0.991 0.991 - - - - - - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1848]
67. si:ch211-191a16.5 ENSDARG00000096545 45 0.991 0.991 - - - - - - - - si:ch211-191a16.5 [Source:ZFIN;Acc:ZDB-GENE-121214-56]
68. si:dkey-7i1.4 si:dkey-7i1.4 77 0.991 0.991 - - - - - - - -
69. si:dkey-58f10.12 ENSDARG00000092680 258 0.991 0.991 - - - - - - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
70. nek1 ENSDARG00000022350 158 0.991 0.991 - - - - - - - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
71. MYH9 MYH9 158 0.99 0.990 - - - - - - - -
72. brf1a ENSDARG00000017835 206 0.99 0.990 - - - - - - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
73. dgat1a ENSDARG00000103503 63 0.989 0.989 - - - - - - - - diacylglycerol O-acyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4600]
74. CU468896.2 CU468896.2 38 0.989 0.989 - - - - - - - -
75. pho ENSDARG00000035133 670 0.989 0.989 - - - - - - - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
76. plekhg7 ENSDARG00000062855 308 0.989 0.989 - - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
77. TMEM55B TMEM55B 76 0.989 0.989 - - - - - - - -
78. ppfibp2a ENSDARG00000061977 199 0.988 0.988 - - - - - - - - PTPRF interacting protein, binding protein 2a (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-070705-277]
79. gpr37l1a ENSDARG00000006079 422 0.988 0.988 - - - - - - - - G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
80. si:ch211-209a2.1 250 0.987 0.987 - - - - - - - - si:ch211-209a2.1, transcript variant X2
81. me3 ENSDARG00000002305 3305 0.987 0.987 - - - - - - - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
82. acp6 ENSDARG00000040064 197 0.987 0.987 - - - - - - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
83. BX539313.3 ENSDARG00000098016 638 0.987 0.987 - - - - - - - -
84. strada ENSDARG00000037929 1614 0.986 0.986 - - - - - - - - ste20-related kinase adaptor alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6482]
85. arfrp1 ENSDARG00000057857 2840 0.986 0.986 - - - - - - - - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
86. sft2d3 ENSDARG00000070284 351 0.984 0.984 - - - - - - - - SFT2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070907-1]
87. myo1ea ENSDARG00000036179 891 0.984 0.984 - - - - - - - - myosin IE, a [Source:ZFIN;Acc:ZDB-GENE-030131-5127]
88. itgb1b ENSDARG00000104484 51 0.984 0.984 - - - - - - - - integrin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-030909-10]
89. lygl1 ENSDARG00000056874 309 0.983 0.983 - - - - - - - - lysozyme g-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-461]
90. ap2m1b ENSDARG00000033899 317 0.983 0.983 - - - - - - - - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
91. itgb1bp1 ENSDARG00000007169 2723 0.981 0.981 - - - - - - - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
92. thoc3 ENSDARG00000056517 909 0.981 0.981 - - - - - - - - THO complex 3 [Source:ZFIN;Acc:ZDB-GENE-040808-14]
93. arl5c ENSDARG00000035719 1257 0.98 0.980 - - - - - - - - ADP-ribosylation factor-like 5C [Source:ZFIN;Acc:ZDB-GENE-040426-1866]
94. rspry1 ENSDARG00000062558 1424 0.98 0.980 - - - - - - - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
95. TMTC2 TMTC2 478 0.98 0.980 - - - - - - - -
96. adcy6a ENSDARG00000061445, ENSDARG00000114782 500 0.98 0.980 - - - - - - - - adenylate cyclase 6a [Source:ZFIN;Acc:ZDB-GENE-060221-1]
97. kcnk5b ENSDARG00000012390 294 0.98 0.980 - - - - - - - - potassium channel, subfamily K, member 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1297]
98. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 0.98 0.980 - - - - - - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
99. C22H19orf26 C22H19orf26 66 0.978 0.978 - - - - - - - -
100. fzd7b ENSDARG00000027589 2562 0.977 0.977 - - - - - - - - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]

There are 1268 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA