Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nkx6.2

Gene Name Gene ID Reads Annotation
nkx6.2 ENSDARG00000104735 5081 NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]










Genes with expression patterns similar to nkx6.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkx6.2 ENSDARG00000104735 5081 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
2. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 3.565 0.750 0.994 - - - 0.836 0.985 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
3. her4.3 ENSDARG00000070770 613 3.128 0.771 - - - 0.704 0.729 0.924 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
4. im:7162084 im:7162084 665 2.776 0.897 - - - - 0.896 0.983 - -
5. SLC5A7 SLC5A7 453 2.76 0.861 - - - - 0.941 0.958 - -
6. nkx6.1 ENSDARG00000022569 3779 2.737 0.889 - - - - 0.935 0.913 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
7. calca ENSDARG00000056590 150 2.726 0.923 - - - - 0.842 0.961 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
8. CU928222.1 ENSDARG00000097436 1662 2.695 0.839 - - - - 0.897 0.959 - -
9. ADAMTS3 ENSDARG00000060127 2839 2.691 0.843 - - - - 0.948 0.900 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
10. chga ENSDARG00000008829 1086 2.684 0.804 - - - - 0.932 0.948 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
11. chat chat 463 2.677 0.861 - - - - 0.831 0.985 - -
12. zgc:113531 ENSDARG00000038794 2063 2.654 0.920 - - - - 0.904 0.830 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
13. si:ch73-265d7.2 ENSDARG00000116713 2142 2.652 0.820 - - - - 0.931 0.901 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
14. ek1 ENSDARG00000020080 742 2.64 0.837 - - - - - 0.902 0.901 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
15. hectd2 ENSDARG00000061194 559 2.634 0.820 - - - - 0.918 0.896 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
16. atcaya ENSDARG00000071678 344 2.633 0.817 - - - - - 0.905 0.911 - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
17. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.617 0.864 - - - - 0.788 0.965 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
18. BX511121.1 ENSDARG00000029997 1774 2.614 0.865 - - - - 0.821 0.928 - -
19. dlg4 88 2.603 0.820 - - - - 0.911 0.872 - - discs large MAGUK scaffold protein 4, transcript variant X5
20. mnx2a ENSDARG00000042106 939 2.603 0.829 - - - - 0.902 0.872 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
21. olig2 ENSDARG00000040946 1405 2.591 0.860 - - - - 0.866 0.865 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
22. slc18a3a ENSDARG00000006356 1285 2.589 0.839 - - - - 0.770 0.980 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
23. CABZ01111990.1 CABZ01111990.1 4374 2.579 - - - 0.889 - 0.724 0.966 - -
24. hnrnpa3 ENSDARG00000059351 453 2.571 0.852 - - - - 0.846 0.873 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
25. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 2.567 0.841 - - - - 0.861 0.865 - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
26. prdm8 ENSDARG00000025017 370 2.564 0.904 - - - - 0.828 0.832 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
27. si:ch211-247j9.1 ENSDARG00000079283 217 2.554 0.890 - - - - 0.743 0.921 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
28. pacsin1b ENSDARG00000042128 1051 2.548 - - - - - 0.801 0.921 0.826 - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
29. sema3c ENSDARG00000034300 881 2.537 0.799 - - - - 0.793 0.945 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
30. FP016176.1 FP016176.1 7030 2.536 - - - 0.887 - 0.749 0.900 - -
31. nes ENSDARG00000088805 2710 2.521 0.734 - - - - 0.827 0.960 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
32. cdkn1c cdkn1c 17427 2.514 0.732 0.903 - - - - 0.879 - -
33. sv2c ENSDARG00000059997 592 2.512 0.852 - - - - 0.797 0.863 - - synaptic vesicle glycoprotein 2C [Source:ZFIN;Acc:ZDB-GENE-060526-233]
34. sst1.1 ENSDARG00000040799 677 2.511 0.775 - - - - 0.971 0.765 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
35. SSX2IP SSX2IP 316 2.508 0.761 - - - - 0.858 0.889 - -
36. tmie ENSDARG00000069423 305 2.494 0.736 - - - - 0.783 0.975 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
37. unc119b ENSDARG00000044362 1528 2.481 0.712 - - - - - 0.907 0.862 - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
38. TNRC6C_2 TNRC6C_2 2444 2.468 - - - - - 0.729 0.860 0.879 -
39. vim ENSDARG00000010008 3551 2.468 0.789 - - - - 0.774 0.905 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
40. tgif1 ENSDARG00000059337 4020 2.461 - - - - 0.903 - 0.743 0.815 - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
41. pkd2l1 ENSDARG00000022503 372 2.458 0.833 - - - - 0.906 0.719 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
42. fyna ENSDARG00000011370 1679 2.456 0.745 - - - - 0.790 0.921 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
43. myt1b ENSDARG00000102879 5411 2.449 0.779 - - - - 0.707 0.963 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
44. nkx2.2b ENSDARG00000101549 266 2.448 0.851 - - - - 0.886 0.711 - - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
45. CHL1 CHL1 1553 2.447 0.779 - - - - 0.736 0.932 - -
46. sox21a ENSDARG00000031664, ENSDARG00000111842 1700 2.436 - - - - 0.977 0.710 0.749 - - SRY (sex determining region Y)-box 21a [Source:ZFIN;Acc:ZDB-GENE-990715-6]
47. nova2 ENSDARG00000017673 7685 2.436 0.742 - - - - 0.717 0.977 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
48. onecutl ENSDARG00000040253 2143 2.435 - - - - - 0.760 0.765 0.910 - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
49. kif5c ENSDARG00000076027 424 2.429 0.744 - - - - 0.845 0.840 - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
50. nrarpb ENSDARG00000018958 6225 2.423 0.744 - - - - 0.704 0.975 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
51. mnx2b ENSDARG00000030350 484 2.404 0.823 - - - - 0.704 0.877 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
52. espn ENSDARG00000076414 343 2.384 0.852 - - - 0.705 0.827 - - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
53. pcdh18a ENSDARG00000089805 1096 2.362 - - 0.714 - 0.708 - 0.940 - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
54. gad1b ENSDARG00000027419 440 2.317 0.793 - - - - 0.717 0.807 - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
55. hoxc4a ENSDARG00000070338 1382 2.306 - - 0.749 - - - 0.805 0.752 - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
56. ptch2 ENSDARG00000055026 980 2.3 - - - - - 0.745 0.727 0.828 - patched 2 [Source:ZFIN;Acc:ZDB-GENE-980526-44]
57. ank2b ENSDARG00000043313 3065 2.287 0.714 - - - - 0.756 0.817 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
58. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 2.247 0.788 - - - - 0.706 0.753 - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
59. lhx4 ENSDARG00000039458 328 1.884 - - - - - 0.929 0.955 - - LIM homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060728-1]
60. cdc14b ENSDARG00000021483 4958 1.877 - 0.988 - 0.889 - - - - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
61. si:ch211-133l11.10 ENSDARG00000005626 381 1.875 - 0.992 - - - - 0.883 - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
62. si:dkey-169l5.3 si:dkey-169l5.3 239 1.874 - - - - - 0.908 0.966 - -
63. ncam1b ENSDARG00000007220 233 1.872 - 0.992 - - - - 0.880 - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
64. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.869 - - - - - 0.893 0.976 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
65. lrrtm1 ENSDARG00000052713 1041 1.856 - - - - - - 0.968 0.888 - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
66. lhfpl4a ENSDARG00000111810 206 1.852 - - - - - 0.933 0.919 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
67. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.847 - 0.977 - 0.870 - - - - - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
68. CABZ01080599.2 CABZ01080599.2 192 1.841 - - - - - 0.901 0.940 - -
69. cadpsb ENSDARG00000070567 458 1.841 - - - - - - 0.956 0.885 - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
70. olfm1b ENSDARG00000014053 1392 1.834 - - - - - - 0.954 0.880 - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
71. tac1 ENSDARG00000014490 781 1.828 0.862 - - - - 0.966 - - - tachykinin 1 [Source:ZFIN;Acc:ZDB-GENE-060503-904]
72. neurog1 ENSDARG00000056130 3924 1.816 - - - - - 0.832 0.984 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
73. CABZ01029738.1 CABZ01029738.1 327 1.81 - - - - - 0.875 0.935 - -
74. chrm3a ENSDARG00000071091 72 1.807 - - - - - 0.899 0.908 - - cholinergic receptor, muscarinic 3a [Source:ZFIN;Acc:ZDB-GENE-090410-4]
75. si:ch73-21g5.7 ENSDARG00000093156 9412 1.807 0.823 - - - - - 0.984 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
76. COL2A1 COL2A1 18161 1.806 - - - 0.877 0.929 - - - -
77. ENTHD1 ENTHD1 235 1.805 - - - - - 0.929 0.876 - -
78. hoxa3a ENSDARG00000103862 2239 1.803 - - - - - - 0.938 0.865 - homeobox A3a [Source:ZFIN;Acc:ZDB-GENE-000823-3]
79. elovl4a ENSDARG00000006773 412 1.802 - - - - - - 0.906 0.896 - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
80. PRKAR2B ENSDARG00000036446 812 1.8 0.872 - - - - - 0.928 - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
81. hoxa10b ENSDARG00000031337 3992 1.795 - 0.973 - - - 0.822 - - - homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
82. dla ENSDARG00000010791 9281 1.794 0.809 - - - - - 0.985 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
83. lhx1a ENSDARG00000014018 958 1.793 - - - - - - 0.894 0.899 - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
84. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.792 - - - - - 0.870 0.922 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
85. mir124-2 196 1.792 0.841 - - - - - 0.951 - - microRNA 124-2
86. epha3l epha3l 1441 1.789 0.877 - - - - - 0.912 - -
87. foxb1a ENSDARG00000089042 101 1.786 0.904 - - - - - 0.882 - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
88. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.784 0.868 - - - - - 0.916 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
89. nexmifb ENSDARG00000029296 416 1.783 - - - - - - 0.889 0.894 - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
90. atp6v0a1b ENSDARG00000015174 1052 1.782 - - - - - - 0.916 0.866 - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
91. clstn1 ENSDARG00000031720 5286 1.781 0.825 - - - - - 0.956 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
92. gfra1b ENSDARG00000102564 821 1.78 0.890 - - - - - 0.890 - - gdnf family receptor alpha 1b [Source:ZFIN;Acc:ZDB-GENE-010226-3]
93. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 1.776 - - - - - 0.901 0.875 - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
94. msi1 ENSDARG00000010710 2634 1.77 - - - - - 0.805 0.965 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
95. tmem35 ENSDARG00000052567 5685 1.77 - - - - - 0.814 0.956 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
96. si:dkey-22o12.7 si:dkey-22o12.7 1812 1.767 - 0.992 - - - - - 0.775 -
97. dnajb5 ENSDARG00000052881, ENSDARG00000116664 885 1.765 - 0.993 - - - 0.772 - - - DnaJ (Hsp40) homolog, subfamily B, member 5 [Source:ZFIN;Acc:ZDB-GENE-070705-308]
98. STMN3 ENSDARG00000038465 1009 1.765 - - - - - 0.796 0.969 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
99. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.762 0.789 - - - - - 0.973 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
100. ENSDARG00000096553 ENSDARG00000096553 388 1.76 - 0.991 - - - - 0.769 - -

There are 2110 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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