Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nkx3.3

Gene Name Gene ID Reads Annotation
nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]










Genes with expression patterns similar to nkx3.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
2. rhobtb2b ENSDARG00000089340 4 2 - - - - - 1.000 1.000 - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
3. themis ENSDARG00000010619 5 2 - - - - - 1.000 1.000 - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
4. cep68 ENSDARG00000039411 30 1.943 - - - - - 0.943 1.000 - - centrosomal protein 68 [Source:ZFIN;Acc:ZDB-GENE-030616-565]
5. chmp6b ENSDARG00000102024 37 1.931 - - - - - 0.931 1.000 - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
6. FHDC1_3 FHDC1_3 66 1.917 - - - - - 0.917 1.000 - -
7. si:ch211-244h4.2 si:ch211-244h4.2 1 1.887 - - - - 0.887 - 1.000 - -
8. zgc:171704 ENSDARG00000018048 14 1.823 - - - - - 0.823 1.000 - - zgc:171704 [Source:ZFIN;Acc:ZDB-GENE-070820-16]
9. RDM1 RDM1 28 1.814 - - - - - 0.814 1.000 - -
10. si:dkeyp-87a6.2 ENSDARG00000093322 18 1.799 - - - - 0.799 - 1.000 - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
11. arhgap15 ENSDARG00000062349 28 1.795 - - 0.859 - - 0.936 - - - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
12. lctlb ENSDARG00000016337 35 1.741 - - 0.741 - - - 1.000 - - lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
13. zgc:112242 11 1.738 - - 0.738 - - - 1.000 - - zgc:112242
14. LRRC2 LRRC2 23 1.719 - - - - 0.719 - 1.000 - -
15. si:dkey-177p2.15p si:dkey-177p2.15p 20 1.714 - - - - 0.921 0.793 - - -
16. SUN2 SUN2 86 1.689 - - - - - 0.777 0.912 - -
17. hsd11b2 ENSDARG00000001975 245 1.619 - - - 0.748 - - 0.871 - - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
18. arvcfa ENSDARG00000074329 53 1.581 - - - - 0.852 - 0.729 - - ARVCF, delta catenin family member a [Source:ZFIN;Acc:ZDB-GENE-091113-43]
19. CR391961.2 CR391961.2 107 1.561 - - - - - 0.784 0.777 - -
20. si:ch211-155o21.4 ENSDARG00000096567 25 1.559 - - 0.706 - - 0.853 - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
21. dnah5 ENSDARG00000087373 168 1.481 - - - 0.726 - - 0.755 - - dynein, axonemal, heavy chain 5 [Source:ZFIN;Acc:ZDB-GENE-110411-177]
22. si:dkeyp-51f12.2 ENSDARG00000095606 24 1 - - - - - - 1.000 - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
23. tmem86b ENSDARG00000038296 3 1 - - - - - - 1.000 - - transmembrane protein 86B [Source:ZFIN;Acc:ZDB-GENE-060825-132]
24. CR790369.2 CR790369.2 0 1 - - - - - - 1.000 - -
25. TMEM121_1 TMEM121_1 22 1 - - - - - 1.000 - - -
26. BX470200.1 BX470200.1 1 1 - - - - - - 1.000 - -
27. flt3 ENSDARG00000058503 32 1 - - - - - - 1.000 - - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
28. ccdc14 ENSDARG00000098734 3 1 - - - - - 1.000 - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
29. si:dkey-119p2.1 si:dkey-119p2.1 1 1 - - - - - - 1.000 - -
30. CMA1_8 CMA1_8 10 1 - - - - - 1.000 - - -
31. TRPC4 TRPC4 18 1 - - - - - - 1.000 - -
32. try 21 1 - - - - - - 1.000 - - trypsin
33. ms4a17a.2 ENSDARG00000105674 32 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
34. arsk ENSDARG00000059714, ENSDARG00000115105 31 1 - - - - - - 1.000 - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
35. MAL2_1 MAL2_1 6 1 - - - - - - 1.000 - -
36. MSH4 ENSDARG00000075826 37 1 - - - - - - 1.000 - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
37. si:ch211-238e22.5 ENSDARG00000100229 0 1 - - - - - - 1.000 - - si:ch211-238e22.5 [Source:ZFIN;Acc:ZDB-GENE-041210-374]
38. zgc:173577 ENSDARG00000098923 71 1 - - - - - - 1.000 - - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
39. ak7b ENSDARG00000017023 25 1 - - - - - - 1.000 - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
40. TNFSF14 ENSDARG00000111357 2 1 - - - - - - 1.000 - - TNF superfamily member 14 [Source:ZFIN;Acc:ZDB-GENE-101109-3]
41. si:ch73-44m9.2 ENSDARG00000094821 101 1 - - - - - - 1.000 - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
42. grapa ENSDARG00000005414 29 1 - - - - - - 1.000 - - GRB2 related adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-050522-347]
43. mthfsd ENSDARG00000062042 34 1 - - - - - - 1.000 - - methenyltetrahydrofolate synthetase domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-3513]
44. zgc:194551 ENSDARG00000114948, ENSDARG00000115221 24 1 - - - - - - 1.000 - - zgc:194551 [Source:ZFIN;Acc:ZDB-GENE-030131-4878]
45. lim2.2 ENSDARG00000059015 11 1 - - - - - - 1.000 - - lens intrinsic membrane protein 2.2 [Source:ZFIN;Acc:ZDB-GENE-060124-1]
46. slc7a9 ENSDARG00000005894 29 1 - - - - - - 1.000 - - solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 [Source:ZFIN;Acc:ZDB-GENE-080116-2]
47. si:ch211-133l5.7 ENSDARG00000095633 3 1 - - - - - - 1.000 - - si:ch211-133l5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-117]
48. irf1b ENSDARG00000043249 30 1 - - - - - 1.000 - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
49. PRTFDC1 ENSDARG00000011683 11 1 - - - - - 1.000 - - - phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
50. zgc:136461 ENSDARG00000093844, ENSDARG00000114728 1 1 - - - - - - 1.000 - - zgc:136461 [Source:ZFIN;Acc:ZDB-GENE-060519-7]
51. POGK POGK 1 1 - - - - - 1.000 - - -
52. CABZ01087853.1 CABZ01087853.1 3 1 - - - - - - 1.000 - -
53. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1 - - - - - - 1.000 - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
54. URB1 ENSDARG00000060308 78 1 - - - - - 1.000 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
55. rfx6 ENSDARG00000041702 0 1 - - - - - - 1.000 - - regulatory factor X, 6 [Source:ZFIN;Acc:ZDB-GENE-041014-299]
56. foxi1 ENSDARG00000104566 176 1 - - - - - 1.000 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
57. star ENSDARG00000006137 149 1 - - - - - - 1.000 - - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
58. cul4a ENSDARG00000096578 14 1 - - - - - - 1.000 - - cullin 4A [Source:ZFIN;Acc:ZDB-GENE-040426-1357]
59. si:dkey-157g20.2 si:dkey-157g20.2 29 1 - - - - - - 1.000 - -
60. abcc12 ENSDARG00000013050 27 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 12 [Source:ZFIN;Acc:ZDB-GENE-050517-25]
61. cacng7a ENSDARG00000063006 2 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, gamma subunit 7a [Source:ZFIN;Acc:ZDB-GENE-060503-814]
62. CR848029.1 CR848029.1 1 1 - - - - - - 1.000 - -
63. NAT14 ENSDARG00000115349 21 1 - - - - - 1.000 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
64. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1 - - - - - - 1.000 - - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
65. RBBP6_10 RBBP6_10 0 1 - - - - - - 1.000 - -
66. mettl8 ENSDARG00000017359 36 1 - - - - - - 1.000 - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
67. valopa ENSDARG00000021150 71 1 - - - - - - 1.000 - - vertebrate ancient long opsin a [Source:ZFIN;Acc:ZDB-GENE-000427-4]
68. FAM188B2 4 1 - - - - - - 1.000 - - family with sequence similarity 188, member B2
69. st6galnac1.2 ENSDARG00000043816 51 1 - - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
70. ENSDARG00000029117 ENSDARG00000029117 80 1 - - - - - - 1.000 - -
71. TULP1 TULP1 50 1 - - - - - - 1.000 - -
72. bmpr1aa ENSDARG00000019728, ENSDARG00000115025 49 1 - - - - - - 1.000 - - bone morphogenetic protein receptor, type IAa [Source:ZFIN;Acc:ZDB-GENE-000502-1]
73. ccdc147 ccdc147 39 1 - - - - - - 1.000 - -
74. si:ch211-219a15.3 ENSDARG00000087659 12 1 - - - - - 1.000 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
75. fam154b fam154b 2 1 - - - - - - 1.000 - -
76. lsm14b ENSDARG00000025386 23 1 - - - - - - 1.000 - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
77. zgc:92249 14 1 - - - - - - 1.000 - - zgc:92249
78. ANKRD34A 22 1 - - - - - - 1.000 - - ankyrin repeat domain 34A, transcript variant X2
79. zgc:113426 ENSDARG00000051793 37 1 - - - - - - 1.000 - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
80. si:ch211-274p24.2 ENSDARG00000095185 92 1 - - - - - - 1.000 - - si:ch211-274p24.2 [Source:ZFIN;Acc:ZDB-GENE-050309-265]
81. si:dkey-272j9.1 si:dkey-272j9.1 10 1 - - - - - - 1.000 - -
82. tbx21 ENSDARG00000004473, ENSDARG00000115643 30 1 - - - - - - 1.000 - - T-box 21 [Source:ZFIN;Acc:ZDB-GENE-080104-3]
83. gp1bb ENSDARG00000074441 116 1 - - - - - 1.000 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
84. taar14l ENSDARG00000069213 11 1 - - - - - - 1.000 - - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
85. CACNA1E 18 1 - - - - - - 1.000 - - calcium voltage-gated channel subunit alpha1 E, transcript variant X6
86. ripply2 ENSDARG00000070535 18 1 - - - - - 1.000 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
87. reep6 ENSDARG00000087349 0 1 - - - - - - 1.000 - - receptor accessory protein 6 [Source:ZFIN;Acc:ZDB-GENE-040912-98]
88. pde6b ENSDARG00000011671 44 1 - - - - - - 1.000 - - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
89. agxta ENSDARG00000052099 65 1 - - - - - - 1.000 - - alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16]
90. def8 ENSDARG00000068208 50 1 - - - - - - 1.000 - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
91. C12H16orf93 C12H16orf93 1 1 - - - - - 1.000 - - -
92. HEXDC ENSDARG00000061216, ENSDARG00000116903 83 1 - - - - - - 1.000 - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:ZFIN;Acc:ZDB-GENE-060929-448]
93. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1 - - - - - 1.000 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
94. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - - 1.000 - -
95. sema3h ENSDARG00000042616 75 1 - - - - - - 1.000 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H [Source:ZFIN;Acc:ZDB-GENE-990715-8]
96. tet1 ENSDARG00000075230, ENSDARG00000110764 8 1 - - - - - - 1.000 - - tet methylcytosine dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-090312-88]
97. BX511266.1 BX511266.1 21 1 - - - - - - 1.000 - -
98. si:ch211-191a16.3 si:ch211-191a16.3 31 1 - - - - - - 1.000 - -
99. CR356223.1 ENSDARG00000093865 1 1 - - - - - 1.000 - - -
100. has1 ENSDARG00000042983 2 1 - - - - - - 1.000 - - hyaluronan synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040218-2]

There are 801 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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