Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nkx3.3

Gene Name Gene ID Reads Annotation
nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]










Genes with expression patterns similar to nkx3.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
2. rhobtb2b ENSDARG00000089340 4 2 - - - - - 1.000 1.000 - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
3. themis ENSDARG00000010619 5 2 - - - - - 1.000 1.000 - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
4. cep68 ENSDARG00000039411 30 1.943 - - - - - 0.943 1.000 - - centrosomal protein 68 [Source:ZFIN;Acc:ZDB-GENE-030616-565]
5. chmp6b ENSDARG00000102024 37 1.931 - - - - - 0.931 1.000 - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
6. FHDC1_3 FHDC1_3 66 1.917 - - - - - 0.917 1.000 - -
7. si:ch211-244h4.2 si:ch211-244h4.2 1 1.887 - - - - 0.887 - 1.000 - -
8. zgc:171704 ENSDARG00000018048 14 1.823 - - - - - 0.823 1.000 - - zgc:171704 [Source:ZFIN;Acc:ZDB-GENE-070820-16]
9. RDM1 RDM1 28 1.814 - - - - - 0.814 1.000 - -
10. si:dkeyp-87a6.2 ENSDARG00000093322 18 1.799 - - - - 0.799 - 1.000 - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
11. arhgap15 ENSDARG00000062349 28 1.795 - - 0.859 - - 0.936 - - - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
12. lctlb ENSDARG00000016337 35 1.741 - - 0.741 - - - 1.000 - - lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
13. zgc:112242 11 1.738 - - 0.738 - - - 1.000 - - zgc:112242
14. LRRC2 LRRC2 23 1.719 - - - - 0.719 - 1.000 - -
15. si:dkey-177p2.15p si:dkey-177p2.15p 20 1.714 - - - - 0.921 0.793 - - -
16. SUN2 SUN2 86 1.689 - - - - - 0.777 0.912 - -
17. hsd11b2 ENSDARG00000001975 245 1.619 - - - 0.748 - - 0.871 - - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
18. arvcfa ENSDARG00000074329 53 1.581 - - - - 0.852 - 0.729 - - ARVCF, delta catenin family member a [Source:ZFIN;Acc:ZDB-GENE-091113-43]
19. CR391961.2 CR391961.2 107 1.561 - - - - - 0.784 0.777 - -
20. si:ch211-155o21.4 ENSDARG00000096567 25 1.559 - - 0.706 - - 0.853 - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
21. dnah5 ENSDARG00000087373 168 1.481 - - - 0.726 - - 0.755 - - dynein, axonemal, heavy chain 5 [Source:ZFIN;Acc:ZDB-GENE-110411-177]
22. wasa ENSDARG00000015149 26 1 - - - - - - 1.000 - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) a [Source:ZFIN;Acc:ZDB-GENE-081104-419]
23. swsap1 ENSDARG00000093423 14 1 - - - - - - 1.000 - - SWIM-type zinc finger 7 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-071116-2]
24. si:dkey-119g10.3 si:dkey-119g10.3 0 1 - - - - - - 1.000 - -
25. ccdc14 ENSDARG00000098734 3 1 - - - - - 1.000 - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
26. CABZ01073069.1 CABZ01073069.1 5 1 - - - - - - 1.000 - -
27. prlrb ENSDARG00000045955 12 1 - - - - - - 1.000 - - prolactin receptor b [Source:ZFIN;Acc:ZDB-GENE-070705-155]
28. ms4a17a.2 ENSDARG00000105674 32 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
29. FNDC3A ENSDARG00000105503 11 1 - - - - - 1.000 - - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
30. SIRT4 ENSDARG00000010415 118 1 - - - - - - 1.000 - - sirtuin 4 [Source:ZFIN;Acc:ZDB-GENE-041010-65]
31. valopa ENSDARG00000021150 71 1 - - - - - - 1.000 - - vertebrate ancient long opsin a [Source:ZFIN;Acc:ZDB-GENE-000427-4]
32. styx ENSDARG00000057699 48 1 - - - - - - 1.000 - - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
33. si:dkeyp-51f12.2 ENSDARG00000095606 24 1 - - - - - - 1.000 - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
34. syne3 ENSDARG00000023237 23 1 - - - - - - 1.000 - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
35. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 1 - - - - - - 1.000 - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
36. zgc:92249 14 1 - - - - - - 1.000 - - zgc:92249
37. si:dkey-230i18.2 ENSDARG00000093532 0 1 - - - - - - 1.000 - - si:dkey-230i18.2 [Source:ZFIN;Acc:ZDB-GENE-070912-457]
38. si:dkey-4c15.9 ENSDARG00000092152 1 1 - - - - - - 1.000 - - si:dkey-4c15.9 [Source:ZFIN;Acc:ZDB-GENE-050420-80]
39. fbxo36b ENSDARG00000039152 7 1 - - - - - - 1.000 - - F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
40. si:dkey-276l13.3 si:dkey-276l13.3 8 1 - - - - - - 1.000 - -
41. si:dkey-112e17.1 ENSDARG00000093201 1 1 - - - - - 1.000 - - - si:dkey-112e17.1 [Source:ZFIN;Acc:ZDB-GENE-060526-193]
42. manba ENSDARG00000008238 25 1 - - - - - - 1.000 - - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
43. si:dkey-16n15.6 ENSDARG00000095805 18 1 - - - - - - 1.000 - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
44. FRMPD1 34 1 - - - - - - 1.000 - - FERM and PDZ domain containing 1, transcript variant X3
45. crybb1l2 ENSDARG00000016793 723 1 - - - - - 1.000 - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
46. zgc:113263 ENSDARG00000045842 51 1 - - - - - - 1.000 - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
47. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 1 - - - - - - 1.000 - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
48. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - - 1.000 - -
49. TMEM121_1 TMEM121_1 22 1 - - - - - 1.000 - - -
50. ripply2 ENSDARG00000070535 18 1 - - - - - 1.000 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
51. LRTM1 ENSDARG00000098742 21 1 - - - - - - 1.000 - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
52. st6galnac1.2 ENSDARG00000043816 51 1 - - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
53. PRTFDC1 ENSDARG00000011683 11 1 - - - - - 1.000 - - - phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
54. CABZ01087853.1 CABZ01087853.1 3 1 - - - - - - 1.000 - -
55. tph2 ENSDARG00000057239, ENSDARG00000109777 55 1 - - - - - - 1.000 - - tryptophan hydroxylase 2 (tryptophan 5-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-040624-4]
56. CDHR5 CDHR5 2 1 - - - - - - 1.000 - -
57. ifit2 ifit2 11 1 - - - - - - 1.000 - -
58. BX572630.2 BX572630.2 0 1 - - - - - - 1.000 - -
59. mipol1 ENSDARG00000104845 6 1 - - - - - - 1.000 - - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
60. fech ENSDARG00000003462 212 1 - - - - - - 1.000 - - ferrochelatase [Source:ZFIN;Acc:ZDB-GENE-000928-1]
61. amn ENSDARG00000062947 36 1 - - - - - - 1.000 - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]
62. AP5Z1 ENSDARG00000078111 91 1 - - - - - - 1.000 - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
63. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1 - - - - - - 1.000 - - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
64. arsk ENSDARG00000059714, ENSDARG00000115105 31 1 - - - - - - 1.000 - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
65. sema3h ENSDARG00000042616 75 1 - - - - - - 1.000 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H [Source:ZFIN;Acc:ZDB-GENE-990715-8]
66. si:ch211-271g18.4 ENSDARG00000115564 197 1 - - - - - - 1.000 - - si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
67. si:ch211-202n12.5 si:ch211-202n12.5 19 1 - - - - - - 1.000 - -
68. VWDE ENSDARG00000103443 10 1 - - - - - - 1.000 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
69. ugt5d1 ENSDARG00000002394 5 1 - - - - - - 1.000 - - UDP glucuronosyltransferase 5 family, polypeptide D1 [Source:ZFIN;Acc:ZDB-GENE-091118-36]
70. si:dkey-202i12.5 si:dkey-202i12.5 20 1 - - - - - - 1.000 - -
71. si:ch211-125e6.12 ENSDARG00000092090 3 1 - - - - - 1.000 - - - si:ch211-125e6.12 [Source:ZFIN;Acc:ZDB-GENE-070912-36]
72. CR848029.1 CR848029.1 1 1 - - - - - - 1.000 - -
73. TNFSF14 ENSDARG00000111357 2 1 - - - - - - 1.000 - - TNF superfamily member 14 [Source:ZFIN;Acc:ZDB-GENE-101109-3]
74. irak1 ENSDARG00000025949 19 1 - - - - - 1.000 - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
75. ZC2HC1C ENSDARG00000070526 14 1 - - - - - 1.000 - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
76. zgc:113426 ENSDARG00000051793 37 1 - - - - - - 1.000 - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
77. crfb16 ENSDARG00000075181 40 1 - - - - - - 1.000 - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
78. si:dkey-157g20.2 si:dkey-157g20.2 29 1 - - - - - - 1.000 - -
79. TESPA1 ENSDARG00000053311 29 1 - - - - - 1.000 - - - thymocyte expressed, positive selection associated 1 [Source:ZFIN;Acc:ZDB-GENE-120727-10]
80. kcnh1a ENSDARG00000024167 9 1 - - - - - - 1.000 - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
81. DGKA DGKA 8 1 - - - - - - 1.000 - -
82. il17c ENSDARG00000057180, ENSDARG00000109701 3 1 - - - - - 1.000 - - - interleukin 17c [Source:ZFIN;Acc:ZDB-GENE-061031-5]
83. si:ch211-191a16.3 si:ch211-191a16.3 31 1 - - - - - - 1.000 - -
84. CABZ01053600.1 CABZ01053600.1 0 1 - - - - - - 1.000 - -
85. CT573356.3 CT573356.3 2 1 - - - - - 1.000 - - -
86. BBX ENSDARG00000012699 79 1 - - - - - - 1.000 - - bobby sox homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-091204-306]
87. grapa ENSDARG00000005414 29 1 - - - - - - 1.000 - - GRB2 related adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-050522-347]
88. znf330 ENSDARG00000020494 3 1 - - - - - - 1.000 - - zinc finger protein 330 [Source:ZFIN;Acc:ZDB-GENE-040426-2697]
89. CABZ01085054.1 CABZ01085054.1 20 1 - - - - - - 1.000 - -
90. si:ch211-186e20.7 ENSDARG00000077960 1 1 - - - - - - 1.000 - - si:ch211-186e20.7 [Source:ZFIN;Acc:ZDB-GENE-110407-6]
91. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 - - - - - - 1.000 - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
92. mb21d1 ENSDARG00000021572 12 1 - - - - - - 1.000 - - Mab-21 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-23]
93. has1 ENSDARG00000042983 2 1 - - - - - - 1.000 - - hyaluronan synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040218-2]
94. RNaseP_nuc_1 RNaseP_nuc_1 19 1 - - - - - - 1.000 - -
95. TRPC4 TRPC4 18 1 - - - - - - 1.000 - -
96. epha8 22 1 - - - - - - 1.000 - - eph receptor A8
97. URB1 ENSDARG00000060308 78 1 - - - - - 1.000 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
98. si:dkey-119p2.1 si:dkey-119p2.1 1 1 - - - - - - 1.000 - -
99. vtg3 ENSDARG00000016448 8 1 - - - - - 1.000 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
100. IQCG ENSDARG00000068678 77 1 - - - - - - 1.000 - - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]

There are 801 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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