Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nkx2.5

Gene Name Gene ID Reads Annotation
nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]










Genes with expression patterns similar to nkx2.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 6 - 1.000 1.000 1.000 1.000 - - 1.000 1.000 NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
2. dbh ENSDARG00000069446, ENSDARG00000114942 60 3.112 - - - 0.755 0.709 - - 0.930 0.718 dopamine beta-hydroxylase (dopamine beta-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-990621-3]
3. vmhc 234 2.655 - - - - 0.928 - - 0.911 0.816 ventricular myosin heavy chain
4. myl7 ENSDARG00000019096 1023 2.618 - - - - 0.922 - - 0.859 0.837 myosin, light chain 7, regulatory [Source:ZFIN;Acc:ZDB-GENE-991019-3]
5. ryr2b ENSDARG00000003706 6 2.587 - - - 0.873 0.810 - - 0.904 - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
6. tnni1b ENSDARG00000052708 478 2.579 - - - - 0.948 - - 0.777 0.854 troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
7. tnnt2a ENSDARG00000020610 313 2.569 - - - - 0.881 - - 0.899 0.789 troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
8. tnnc1a ENSDARG00000011400 165 2.49 - - - - 0.774 - - 0.930 0.786 troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
9. vmhcl 119 2.407 - - - 0.839 0.789 - - - 0.779 ventricular myosin heavy chain-like
10. nppa ENSDARG00000052960 295 2.398 - - - - 0.890 - - 0.717 0.791 natriuretic peptide A [Source:ZFIN;Acc:ZDB-GENE-030131-95]
11. tbx1 ENSDARG00000031891 397 2.294 - - 0.762 0.738 0.794 - - - - T-box 1 [Source:ZFIN;Acc:ZDB-GENE-030805-5]
12. CU459094.1 ENSDARG00000110517 17 1.904 - 1.000 - - - - - 0.904 - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
13. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1.884 - 1.000 - - - - - 0.884 - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
14. nkx2.7 ENSDARG00000021232 38 1.828 - - 0.891 - - - - - 0.937 NK2 transcription factor related 7 [Source:ZFIN;Acc:ZDB-GENE-990415-179]
15. vax2 ENSDARG00000058702 175 1.82 - 1.000 - 0.820 - - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
16. slc22a7b slc22a7b 11 1.802 - 1.000 - - - - - - 0.802
17. elk4 ENSDARG00000077092 19 1.783 - 1.000 0.783 - - - - - - ELK4, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-1]
18. MSH4 ENSDARG00000075826 37 1.772 - 1.000 - - 0.772 - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
19. adprhl1 ENSDARG00000041589 34 1.767 - - - - 0.857 - - 0.910 - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
20. BX927317.2 ENSDARG00000101263 4 1.752 - 1.000 0.752 - - - - - -
21. si:ch211-260o22.1 si:ch211-260o22.1 34 1.751 - - - - 0.832 - - 0.919 -
22. si:dkey-188k17.2 7 1.728 - 1.000 0.728 - - - - - - si:dkey-188k17.2
23. fhl2a ENSDARG00000042018 244 1.721 - - - - 0.880 - - - 0.841 four and a half LIM domains 2a [Source:ZFIN;Acc:ZDB-GENE-040808-49]
24. opn3 ENSDARG00000052775 8 1.717 - - - 0.813 - - - 0.904 - opsin 3 [Source:ZFIN;Acc:ZDB-GENE-080227-16]
25. CABZ01112331.1 CABZ01112331.1 9 1.706 - 1.000 - - - - - - 0.706
26. spo11 ENSDARG00000013837 7 1.706 - - - - - - - 0.904 0.802 SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
27. si:dkey-54j5.1 si:dkey-54j5.1 4 1.706 - - - - - - - 0.904 0.802
28. CU633740.1 CU633740.1 8 1.667 - 0.953 - - 0.714 - - - -
29. irx7 ENSDARG00000002601 72 1.664 - - 0.818 - 0.846 - - - - iroquois homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-020103-1]
30. cmlc1 ENSDARG00000032976 455 1.662 - - - - - - - 0.947 0.715 cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
31. si:ch211-105d18.7 si:ch211-105d18.7 6 1.649 - - 0.776 0.873 - - - - -
32. foxi1 ENSDARG00000104566 176 1.638 - - - - 0.777 - - - 0.861 forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
33. CABZ01058107.1 ENSDARG00000112826 8 1.633 - 0.729 - - - - - 0.904 - C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085]
34. CABZ01064671.1 ENSDARG00000039935 21 1.629 - - - - 0.727 - - 0.902 -
35. foxe1 ENSDARG00000079266 6 1.629 - - - - 0.762 - - 0.867 - forkhead box E1 [Source:ZFIN;Acc:ZDB-GENE-061116-1]
36. hand2 ENSDARG00000008305 1214 1.614 - - - - - - - 0.825 0.789 heart and neural crest derivatives expressed 2 [Source:ZFIN;Acc:ZDB-GENE-000511-1]
37. si:ch211-9d9.1 ENSDARG00000099839 75 1.584 - - - - 0.867 - - 0.717 - si:ch211-9d9.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2657]
38. BX323876.3 BX323876.3 19 1.566 - - - 0.776 - - - - 0.790
39. aldh1a3 ENSDARG00000076933 95 1.548 - - - 0.802 - - - 0.746 - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
40. SLC24A2_1 SLC24A2_1 13 1.543 - - - - 0.776 - - 0.767 -
41. dmbx1a ENSDARG00000009922 284 1.533 - - 0.806 - 0.727 - - - - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
42. tlx1 ENSDARG00000003965 67 1.529 - - - - - - - 0.780 0.749 T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2]
43. si:ch211-15j21.2 si:ch211-15j21.2 13 1.525 - - - 0.771 - - - - 0.754
44. ssh1a ENSDARG00000056780 3 1.516 - - - - 0.714 - - - 0.802 slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
45. pcdh2g16 1 1.516 - - - - 0.714 - - - 0.802 protocadherin 2 gamma 16
46. ENSDARG00000088389 ENSDARG00000088389 2 1.516 - - - - 0.714 - - - 0.802
47. zgc:158464 ENSDARG00000100342 18 1.514 - 0.712 - - - - - - 0.802 zgc:158464 [Source:ZFIN;Acc:ZDB-GENE-070112-432]
48. tbx20 ENSDARG00000005150 335 1.511 - - - - 0.756 - - - 0.755 T-box 20 [Source:ZFIN;Acc:ZDB-GENE-000427-7]
49. wu:fe38f03 wu:fe38f03 22 1.502 - 0.715 - - - - - 0.787 -
50. tectb ENSDARG00000045268 3 1.414 - - - - - - - 0.713 0.701 tectorin beta [Source:ZFIN;Acc:ZDB-GENE-041212-16]
51. CR936975.1 ENSDARG00000096862 22 1 - 1.000 - - - - - - -
52. rmnd1 ENSDARG00000027465 116 1 - 1.000 - - - - - - - required for meiotic nuclear division 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-21]
53. si:ch211-162i8.2 ENSDARG00000096041 4 1 - 1.000 - - - - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
54. mir457b 21 1 - 1.000 - - - - - - - microRNA 457b
55. nudt6 ENSDARG00000103523 64 1 - 1.000 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 6 [Source:ZFIN;Acc:ZDB-GENE-070410-44]
56. zgc:175280 ENSDARG00000099111 71 1 - 1.000 - - - - - - - zgc:175280 [Source:ZFIN;Acc:ZDB-GENE-080219-39]
57. FP085391.2 FP085391.2 85 1 - 1.000 - - - - - - -
58. heyl ENSDARG00000055798, ENSDARG00000112770 76 1 - 1.000 - - - - - - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
59. edaradd ENSDARG00000062289 66 1 - 1.000 - - - - - - - EDAR-associated death domain [Source:ZFIN;Acc:ZDB-GENE-050114-5]
60. mamdc2a ENSDARG00000098345 21 1 - 1.000 - - - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
61. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - 1.000 - - - - - - -
62. HIST1H4J_2 HIST1H4J_2 12 1 - 1.000 - - - - - - -
63. kcnn1a ENSDARG00000091306 95 1 - 1.000 - - - - - - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
64. mlc1 ENSDARG00000063026 29 1 - 1.000 - - - - - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:ZFIN;Acc:ZDB-GENE-050419-145]
65. SYNDIG1 ENSDARG00000100751 165 1 - 1.000 - - - - - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
66. echdc1 68 1 - 1.000 - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
67. si:dkey-79f11.1 si:dkey-79f11.1 91 1 - 1.000 - - - - - - -
68. NLRC5 ENSDARG00000024631 11 1 - 1.000 - - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
69. ATXN1 ATXN1 12 1 - 1.000 - - - - - - -
70. st8sia1 ENSDARG00000098221 34 1 - 1.000 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
71. slc43a3a ENSDARG00000059682 27 1 - 1.000 - - - - - - - solute carrier family 43, member 3a [Source:ZFIN;Acc:ZDB-GENE-110208-8]
72. gata1b ENSDARG00000059130 151 1 - 1.000 - - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
73. adcyap1a ENSDARG00000004015 67 1 - 1.000 - - - - - - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
74. CR381673.2 ENSDARG00000103241 7 1 - 1.000 - - - - - - -
75. FP325123.1_1 ENSDARG00000105359 38 1 - 1.000 - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
76. sphkap ENSDARG00000017429 60 1 - 1.000 - - - - - - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
77. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1 - 1.000 - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
78. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - 1.000 - - - - - - -
79. matn3a ENSDARG00000069245 2410 1 - 1.000 - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
80. mst1rb ENSDARG00000004871, ENSDARG00000116535 1 1 - 1.000 - - - - - - - macrophage stimulating 1 receptor b [Source:ZFIN;Acc:ZDB-GENE-071218-3]
81. si:ch211-199g17.8 si:ch211-199g17.8 9 1 - 1.000 - - - - - - -
82. BX000701.3 BX000701.3 4 1 - 1.000 - - - - - - -
83. ROCK2_1 ROCK2_1 47 1 - 1.000 - - - - - - -
84. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - 1.000 - - - - - - -
85. si:ch211-135l21.9 si:ch211-135l21.9 8 1 - 1.000 - - - - - - -
86. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
87. si:ch211-195i24.1 si:ch211-195i24.1 10 1 - 1.000 - - - - - - -
88. gc2 ENSDARG00000018329 0 1 - 1.000 - - - - - - - guanylyl cyclase 2 [Source:ZFIN;Acc:ZDB-GENE-011128-8]
89. si:ch73-62b13.1 ENSDARG00000093269 11 1 - 1.000 - - - - - - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
90. fgf9 ENSDARG00000078625 2 1 - 1.000 - - - - - - - fibroblast growth factor 9 [Source:ZFIN;Acc:ZDB-GENE-070424-238]
91. prrt1 ENSDARG00000062208 368 1 - 1.000 - - - - - - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
92. slc1a3b ENSDARG00000043148 431 1 - 1.000 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
93. arih1l ENSDARG00000036870, ENSDARG00000112965 82 1 - 1.000 - - - - - - - ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2395]
94. si:dkey-113d16.9 si:dkey-113d16.9 345 1 - 1.000 - - - - - - -
95. CABZ01054394.1 ENSDARG00000090942 12 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF26.1-like [Source:NCBI gene;Acc:101885996]
96. cacna1c ENSDARG00000008398 193 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
97. EDN3 14 1 - 1.000 - - - - - - - endothelin 3
98. caps2 ENSDARG00000058486 4 1 - 1.000 - - - - - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
99. si:ch211-218h8.1 ENSDARG00000091026 0 1 - 1.000 - - - - - - - si:ch211-218h8.1 [Source:ZFIN;Acc:ZDB-GENE-081103-16]
100. CU694319.1 CU694319.1 72 1 - 1.000 - - - - - - -

There are 859 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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