Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nkx2.5

Gene Name Gene ID Reads Annotation
nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]










Genes with expression patterns similar to nkx2.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 6 - 1.000 1.000 1.000 1.000 - - 1.000 1.000 NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
2. dbh ENSDARG00000069446, ENSDARG00000114942 60 3.112 - - - 0.755 0.709 - - 0.930 0.718 dopamine beta-hydroxylase (dopamine beta-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-990621-3]
3. vmhc 234 2.655 - - - - 0.928 - - 0.911 0.816 ventricular myosin heavy chain
4. myl7 ENSDARG00000019096 1023 2.618 - - - - 0.922 - - 0.859 0.837 myosin, light chain 7, regulatory [Source:ZFIN;Acc:ZDB-GENE-991019-3]
5. ryr2b ENSDARG00000003706 6 2.587 - - - 0.873 0.810 - - 0.904 - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
6. tnni1b ENSDARG00000052708 478 2.579 - - - - 0.948 - - 0.777 0.854 troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
7. tnnt2a ENSDARG00000020610 313 2.569 - - - - 0.881 - - 0.899 0.789 troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
8. tnnc1a ENSDARG00000011400 165 2.49 - - - - 0.774 - - 0.930 0.786 troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
9. vmhcl 119 2.407 - - - 0.839 0.789 - - - 0.779 ventricular myosin heavy chain-like
10. nppa ENSDARG00000052960 295 2.398 - - - - 0.890 - - 0.717 0.791 natriuretic peptide A [Source:ZFIN;Acc:ZDB-GENE-030131-95]
11. tbx1 ENSDARG00000031891 397 2.294 - - 0.762 0.738 0.794 - - - - T-box 1 [Source:ZFIN;Acc:ZDB-GENE-030805-5]
12. CU459094.1 ENSDARG00000110517 17 1.904 - 1.000 - - - - - 0.904 - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
13. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1.884 - 1.000 - - - - - 0.884 - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
14. nkx2.7 ENSDARG00000021232 38 1.828 - - 0.891 - - - - - 0.937 NK2 transcription factor related 7 [Source:ZFIN;Acc:ZDB-GENE-990415-179]
15. vax2 ENSDARG00000058702 175 1.82 - 1.000 - 0.820 - - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
16. slc22a7b slc22a7b 11 1.802 - 1.000 - - - - - - 0.802
17. elk4 ENSDARG00000077092 19 1.783 - 1.000 0.783 - - - - - - ELK4, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-1]
18. MSH4 ENSDARG00000075826 37 1.772 - 1.000 - - 0.772 - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
19. adprhl1 ENSDARG00000041589 34 1.767 - - - - 0.857 - - 0.910 - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
20. BX927317.2 ENSDARG00000101263 4 1.752 - 1.000 0.752 - - - - - -
21. si:ch211-260o22.1 si:ch211-260o22.1 34 1.751 - - - - 0.832 - - 0.919 -
22. si:dkey-188k17.2 7 1.728 - 1.000 0.728 - - - - - - si:dkey-188k17.2
23. fhl2a ENSDARG00000042018 244 1.721 - - - - 0.880 - - - 0.841 four and a half LIM domains 2a [Source:ZFIN;Acc:ZDB-GENE-040808-49]
24. opn3 ENSDARG00000052775 8 1.717 - - - 0.813 - - - 0.904 - opsin 3 [Source:ZFIN;Acc:ZDB-GENE-080227-16]
25. si:dkey-54j5.1 si:dkey-54j5.1 4 1.706 - - - - - - - 0.904 0.802
26. spo11 ENSDARG00000013837 7 1.706 - - - - - - - 0.904 0.802 SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
27. CABZ01112331.1 CABZ01112331.1 9 1.706 - 1.000 - - - - - - 0.706
28. CU633740.1 CU633740.1 8 1.667 - 0.953 - - 0.714 - - - -
29. irx7 ENSDARG00000002601 72 1.664 - - 0.818 - 0.846 - - - - iroquois homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-020103-1]
30. cmlc1 ENSDARG00000032976 455 1.662 - - - - - - - 0.947 0.715 cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
31. si:ch211-105d18.7 si:ch211-105d18.7 6 1.649 - - 0.776 0.873 - - - - -
32. foxi1 ENSDARG00000104566 176 1.638 - - - - 0.777 - - - 0.861 forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
33. CABZ01058107.1 ENSDARG00000112826 8 1.633 - 0.729 - - - - - 0.904 - C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085]
34. foxe1 ENSDARG00000079266 6 1.629 - - - - 0.762 - - 0.867 - forkhead box E1 [Source:ZFIN;Acc:ZDB-GENE-061116-1]
35. CABZ01064671.1 ENSDARG00000039935 21 1.629 - - - - 0.727 - - 0.902 -
36. hand2 ENSDARG00000008305 1214 1.614 - - - - - - - 0.825 0.789 heart and neural crest derivatives expressed 2 [Source:ZFIN;Acc:ZDB-GENE-000511-1]
37. si:ch211-9d9.1 ENSDARG00000099839 75 1.584 - - - - 0.867 - - 0.717 - si:ch211-9d9.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2657]
38. BX323876.3 BX323876.3 19 1.566 - - - 0.776 - - - - 0.790
39. aldh1a3 ENSDARG00000076933 95 1.548 - - - 0.802 - - - 0.746 - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
40. SLC24A2_1 SLC24A2_1 13 1.543 - - - - 0.776 - - 0.767 -
41. dmbx1a ENSDARG00000009922 284 1.533 - - 0.806 - 0.727 - - - - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
42. tlx1 ENSDARG00000003965 67 1.529 - - - - - - - 0.780 0.749 T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2]
43. si:ch211-15j21.2 si:ch211-15j21.2 13 1.525 - - - 0.771 - - - - 0.754
44. ssh1a ENSDARG00000056780 3 1.516 - - - - 0.714 - - - 0.802 slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
45. pcdh2g16 1 1.516 - - - - 0.714 - - - 0.802 protocadherin 2 gamma 16
46. ENSDARG00000088389 ENSDARG00000088389 2 1.516 - - - - 0.714 - - - 0.802
47. zgc:158464 ENSDARG00000100342 18 1.514 - 0.712 - - - - - - 0.802 zgc:158464 [Source:ZFIN;Acc:ZDB-GENE-070112-432]
48. tbx20 ENSDARG00000005150 335 1.511 - - - - 0.756 - - - 0.755 T-box 20 [Source:ZFIN;Acc:ZDB-GENE-000427-7]
49. wu:fe38f03 wu:fe38f03 22 1.502 - 0.715 - - - - - 0.787 -
50. tectb ENSDARG00000045268 3 1.414 - - - - - - - 0.713 0.701 tectorin beta [Source:ZFIN;Acc:ZDB-GENE-041212-16]
51. USH1G USH1G 25 1 - 1.000 - - - - - - -
52. cabp2a ENSDARG00000052016 19 1 - 1.000 - - - - - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
53. CU655961.3 ENSDARG00000106724 14 1 - 1.000 - - - - - - -
54. si:ch211-218h8.1 ENSDARG00000091026 0 1 - 1.000 - - - - - - - si:ch211-218h8.1 [Source:ZFIN;Acc:ZDB-GENE-081103-16]
55. prph2a ENSDARG00000038018 2 1 - 1.000 - - - - - - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
56. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - 1.000 - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
57. si:dkey-77f17.1 si:dkey-77f17.1 83 1 - 1.000 - - - - - - -
58. SYNDIG1 ENSDARG00000100751 165 1 - 1.000 - - - - - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
59. ncam2 ENSDARG00000017466 175 1 - 1.000 - - - - - - - neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
60. caps2 ENSDARG00000058486 4 1 - 1.000 - - - - - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
61. edaradd ENSDARG00000062289 66 1 - 1.000 - - - - - - - EDAR-associated death domain [Source:ZFIN;Acc:ZDB-GENE-050114-5]
62. sftpba ENSDARG00000094708 2 1 - 1.000 - - - - - - - surfactant protein Ba [Source:ZFIN;Acc:ZDB-GENE-091204-378]
63. KBTBD11 ENSDARG00000104958 8 1 - 1.000 - - - - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
64. nudt6 ENSDARG00000103523 64 1 - 1.000 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 6 [Source:ZFIN;Acc:ZDB-GENE-070410-44]
65. APEX2 ENSDARG00000008472 7 1 - 1.000 - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
66. sdhda ENSDARG00000055712 50 1 - 1.000 - - - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
67. rmnd1 ENSDARG00000027465 116 1 - 1.000 - - - - - - - required for meiotic nuclear division 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-21]
68. si:ch211-281p14.2 22 1 - 1.000 - - - - - - - si:ch211-281p14.2, transcript variant X2
69. CABZ01087025.1 ENSDARG00000117232 10 1 - 1.000 - - - - - - -
70. CCNO 21 1 - 1.000 - - - - - - - cyclin O
71. b3gat2 ENSDARG00000030733 348 1 - 1.000 - - - - - - - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
72. GPR82 GPR82 127 1 - 1.000 - - - - - - -
73. CABZ01088365.1 CABZ01088365.1 66 1 - 1.000 - - - - - - -
74. gc2 ENSDARG00000018329 0 1 - 1.000 - - - - - - - guanylyl cyclase 2 [Source:ZFIN;Acc:ZDB-GENE-011128-8]
75. si:dkey-79f11.1 si:dkey-79f11.1 91 1 - 1.000 - - - - - - -
76. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 - 1.000 - - - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
77. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 - 1.000 - - - - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
78. si:dkey-272j9.4 si:dkey-272j9.4 2 1 - 1.000 - - - - - - -
79. tsen54 ENSDARG00000036844 11 1 - 1.000 - - - - - - - TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]
80. GRIN3A ENSDARG00000075802 27 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
81. si:ch1073-464p5.5 ENSDARG00000079544 5 1 - 1.000 - - - - - - - si:ch1073-464p5.5 [Source:ZFIN;Acc:ZDB-GENE-091116-35]
82. echdc1 68 1 - 1.000 - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
83. CT027674.1 ENSDARG00000106606 11 1 - 1.000 - - - - - - - probable E3 ubiquitin-protein ligase TRIML1 [Source:NCBI gene;Acc:108191962]
84. ankrd33aa ENSDARG00000055638 6 1 - 1.000 - - - - - - - ankyrin repeat domain 33Aa [Source:ZFIN;Acc:ZDB-GENE-080520-2]
85. chia.3 ENSDARG00000009612 14 1 - 1.000 - - - - - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
86. st6galnac1.1 ENSDARG00000043814 95 1 - 1.000 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
87. mkks ENSDARG00000016139 70 1 - 1.000 - - - - - - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
88. npffr2.1 npffr2.1 60 1 - 1.000 - - - - - - -
89. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - 1.000 - - - - - - -
90. nobox 5 1 - 1.000 - - - - - - - NOBOX oogenesis homeobox
91. CR933820.2 CR933820.2 152 1 - 1.000 - - - - - - -
92. BX000701.3 BX000701.3 4 1 - 1.000 - - - - - - -
93. mir457b 21 1 - 1.000 - - - - - - - microRNA 457b
94. si:ch73-62b13.1 ENSDARG00000093269 11 1 - 1.000 - - - - - - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
95. gaa ENSDARG00000090714 19 1 - 1.000 - - - - - - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
96. si:ch211-272h9.5 ENSDARG00000092167 8 1 - 1.000 - - - - - - - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
97. asf1ba_1 ENSDARG00000101037 3 1 - 1.000 - - - - - - - anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
98. CABZ01056052.1 ENSDARG00000110748 3 1 - 1.000 - - - - - - -
99. trim35-3_1 ENSDARG00000052255 6 1 - 1.000 - - - - - - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
100. polg ENSDARG00000060951 33 1 - 1.000 - - - - - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]

There are 859 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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