Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nkx2.3

Gene Name Gene ID Reads Annotation
nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]










Genes with expression patterns similar to nkx2.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
2. fgf20b ENSDARG00000086070 13 2.204 - - - - - - 0.734 0.712 0.758 fibroblast growth factor 20b [Source:ZFIN;Acc:ZDB-GENE-060117-5]
3. GPR180 73 1.942 0.990 - - 0.952 - - - - - G protein-coupled receptor 180, transcript variant X2
4. suv420h2 2186 1.925 - - - 0.936 0.989 - - - - suppressor of variegation 4-20 homolog 2 (Drosophila)
5. DTX3 DTX3 303 1.897 0.948 - - 0.949 - - - - -
6. sfi1 ENSDARG00000053992 1075 1.886 - - - 0.968 - - 0.918 - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
7. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.883 - - - 0.886 0.997 - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
8. eif3d ENSDARG00000021257 1524 1.857 - - - 0.861 0.996 - - - - eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]
9. taf1b ENSDARG00000028937 879 1.838 - - - 0.960 - 0.878 - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
10. MUC5AC MUC5AC 32 1.826 0.990 - - - - - 0.836 - -
11. NACC2 160 1.799 0.963 - - - - - 0.836 - - NACC family member 2
12. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 1.796 0.976 - - - - - 0.820 - - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
13. atp1b4 ENSDARG00000053262 1337 1.78 - - - 0.781 0.999 - - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
14. ZNF648 ENSDARG00000104823 194 1.759 0.990 - - - - 0.769 - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
15. SYNGAP1_1 SYNGAP1_1 66 1.749 - - - 0.954 - - 0.795 - -
16. si:ch211-86h15.1 ENSDARG00000074098 354 1.748 0.902 - - - - - 0.846 - - si:ch211-86h15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-38]
17. mtor ENSDARG00000053196 2156 1.744 - - - 0.748 0.996 - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
18. SLC41A2 SLC41A2 202 1.737 0.913 - - - - - 0.824 - -
19. DIP2C DIP2C 222 1.736 - - - 0.947 - 0.789 - - -
20. cuedc1b ENSDARG00000054748 1638 1.736 - - - 0.742 0.994 - - - - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
21. gcdhl gcdhl 38 1.736 0.982 - - - - - 0.754 - -
22. si:ch211-59m15.1 87 1.727 - - - 0.945 - 0.782 - - - si:ch211-59m15.1
23. ADCY3 ADCY3 537 1.712 - - - 0.958 - - 0.754 - -
24. CABZ01073740.1 CABZ01073740.1 27 1.712 - - - - - 0.748 0.964 - -
25. gab1 ENSDARG00000037018 1489 1.711 - - - - 0.996 0.715 - - - GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674]
26. smcr7b smcr7b 690 1.703 0.801 - - 0.902 - - - - -
27. SYTL1 ENSDARG00000070094 282 1.703 0.990 - - - - 0.713 - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
28. ubr2 ENSDARG00000070164 3960 1.676 - - - 0.705 0.971 - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
29. CEP170B ENSDARG00000074636 336 1.673 0.940 - - - - - 0.733 - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
30. ly75 ENSDARG00000053113 196 1.669 0.935 - - - - 0.734 - - - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
31. cep70 ENSDARG00000076965 140 1.666 0.872 - - - - - 0.794 - - centrosomal protein 70 [Source:ZFIN;Acc:ZDB-GENE-070705-311]
32. far1 ENSDARG00000006899 204 1.663 - - - 0.944 - - 0.719 - - fatty acyl CoA reductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2908]
33. soat2 ENSDARG00000059824 62 1.656 - - - - - 0.834 0.822 - - sterol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-061013-742]
34. relb ENSDARG00000086173 762 1.655 0.904 - - - - 0.751 - - - v-rel avian reticuloendotheliosis viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-030131-9531]
35. si:dkey-72l17.6 ENSDARG00000102008 42 1.653 - - - - - 0.716 0.937 - - si:dkey-72l17.6 [Source:ZFIN;Acc:ZDB-GENE-110913-49]
36. anapc1 ENSDARG00000075687 488 1.65 - - - 0.780 - 0.870 - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
37. exd2 ENSDARG00000016117 342 1.643 0.708 - - 0.935 - - - - - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
38. dixdc1b ENSDARG00000056267 307 1.641 - - - 0.938 - - 0.703 - - DIX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-041008-148]
39. sla1 ENSDARG00000054340 95 1.621 0.893 - - - - 0.728 - - - Src-like-adaptor 1 [Source:ZFIN;Acc:ZDB-GENE-050904-3]
40. rasa4 ENSDARG00000029372 295 1.62 0.767 - - - - 0.853 - - - RAS p21 protein activator 4 [Source:ZFIN;Acc:ZDB-GENE-060526-349]
41. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 1.61 - - - - - 0.716 0.894 - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
42. gorab ENSDARG00000042031 483 1.608 0.887 - - - - 0.721 - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
43. fzd5 ENSDARG00000025420 1082 1.594 - - - 0.763 - - 0.831 - - frizzled class receptor 5 [Source:ZFIN;Acc:ZDB-GENE-990415-218]
44. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1.581 - - - - - 0.748 0.833 - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
45. wrap53 ENSDARG00000086150 975 1.577 - - - 0.803 - - 0.774 - - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
46. dgcr14 1608 1.574 - - - 0.866 - - 0.708 - - DiGeorge syndrome critical region gene 14
47. bnip2 ENSDARG00000013397 206 1.55 0.794 - - - - - 0.756 - - BCL2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040109-6]
48. CR450814.1 ENSDARG00000096835 137 1.541 - - - - - 0.798 0.743 - -
49. tbrg1 ENSDARG00000074996 733 1.53 - - - 0.789 - - 0.741 - - transforming growth factor beta regulator 1 [Source:ZFIN;Acc:ZDB-GENE-080220-62]
50. RNASEH2C ENSDARG00000089637 1673 1.525 - - - 0.817 - - 0.708 - - ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
51. efnb2b ENSDARG00000074050 77 1.517 - - - - - 0.720 0.797 - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
52. aldh5a1 ENSDARG00000076544, ENSDARG00000113300 1021 1.515 0.743 - - 0.772 - - - - - aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-070228-2]
53. CABZ01084942.1 ENSDARG00000100332 69 1.498 0.757 - - - - - 0.741 - -
54. si:ch1073-263o8.2 ENSDARG00000090870 66 1.495 - - - - - 0.748 0.747 - - si:ch1073-263o8.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5362]
55. haao ENSDARG00000076487 143 1.462 - - - - - 0.750 0.712 - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
56. FAM132B FAM132B 39 1.453 - - - - - 0.746 0.707 - -
57. ampd3b ENSDARG00000032469, ENSDARG00000117191 350 1.43 - - - - - 0.717 0.713 - - adenosine monophosphate deaminase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5929]
58. scgn ENSDARG00000058732, ENSDARG00000115991 119 1.426 - - - - - 0.724 0.702 - - secretagogin, EF-hand calcium binding protein [Source:ZFIN;Acc:ZDB-GENE-041010-82]
59. otx2 766 0.999 - - - - 0.999 - - - - orthodenticle homeobox 2, transcript variant X2
60. armc9 ENSDARG00000087299 459 0.999 - - - - 0.999 - - - - armadillo repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-100922-67]
61. CABZ01027552.1 CABZ01027552.1 760 0.999 - - - - 0.999 - - - -
62. USP2_1 USP2_1 544 0.999 - - - - 0.999 - - - -
63. SNORA70 SNORA70 511 0.999 - - - - 0.999 - - - -
64. tarsl2 ENSDARG00000092774 505 0.999 - - - - 0.999 - - - - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
65. sh3bp5a ENSDARG00000100529 642 0.999 - - - - 0.999 - - - - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
66. il12rb2l ENSDARG00000074850 407 0.999 - - - - 0.999 - - - - interleukin 12 receptor, beta 2a, like [Source:ZFIN;Acc:ZDB-GENE-080107-6]
67. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 0.999 - - - - 0.999 - - - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
68. ccdc53 982 0.999 - - - - 0.999 - - - - coiled-coil domain containing 53
69. rbpja ENSDARG00000003398 1309 0.998 - - - - 0.998 - - - - recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]
70. WIPF3 WIPF3 804 0.998 - - - - 0.998 - - - -
71. si:dkey-251i10.2 ENSDARG00000093957 4424 0.998 - - - - 0.998 - - - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
72. ticrr ENSDARG00000045605 739 0.998 - - - - 0.998 - - - - TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]
73. adcyap1b ENSDARG00000027740 1539 0.998 - - - - 0.998 - - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
74. zgc:110699 ENSDARG00000017474 381 0.998 - - - - 0.998 - - - - zgc:110699 [Source:ZFIN;Acc:ZDB-GENE-050522-487]
75. cdkn1a ENSDARG00000076554 591 0.998 - - - - 0.998 - - - - cyclin-dependent kinase inhibitor 1A [Source:ZFIN;Acc:ZDB-GENE-070705-7]
76. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 0.997 - - - - 0.997 - - - - syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
77. USP24 ENSDARG00000059925 1294 0.997 - - - - 0.997 - - - - ubiquitin specific peptidase 24 [Source:ZFIN;Acc:ZDB-GENE-030131-4356]
78. cdk5 ENSDARG00000056683 1998 0.997 - - - - 0.997 - - - - cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]
79. cog4 ENSDARG00000054264 785 0.997 - - - - 0.997 - - - - component of oligomeric golgi complex 4 [Source:ZFIN;Acc:ZDB-GENE-060312-33]
80. eng2a eng2a 186 0.997 0.997 - - - - - - - -
81. ESCO1 ENSDARG00000077057 1112 0.997 - - - - 0.997 - - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-130530-818]
82. rnaseh1 ENSDARG00000042571 922 0.997 - - - - 0.997 - - - - ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]
83. wu:fc26g07 wu:fc26g07 1165 0.997 - - - - 0.997 - - - -
84. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 0.997 - - - - 0.997 - - - - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
85. clasp1a ENSDARG00000010280 1158 0.996 - - - - 0.996 - - - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
86. itm2ca ENSDARG00000043448 1265 0.996 - - - - 0.996 - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
87. znf280d ENSDARG00000077013 1387 0.996 - - - - 0.996 - - - - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
88. ttc13 ENSDARG00000063242 1360 0.996 - - - - 0.996 - - - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
89. slc20a1b ENSDARG00000010641 2564 0.996 - - - - 0.996 - - - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
90. pik3r3a ENSDARG00000103038 1132 0.996 - - - - 0.996 - - - - phosphoinositide-3-kinase, regulatory subunit 3a (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-1978]
91. usp40 ENSDARG00000071197 825 0.996 - - - - 0.996 - - - - ubiquitin specific peptidase 40 [Source:ZFIN;Acc:ZDB-GENE-060518-5]
92. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 0.995 - - - - 0.995 - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
93. arhgap11a ENSDARG00000100019 1642 0.995 - - - - 0.995 - - - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
94. prickle3 ENSDARG00000073996 840 0.995 - - - - 0.995 - - - - prickle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-081105-86]
95. kdm6bb ENSDARG00000056929 4807 0.995 - - - - 0.995 - - - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
96. AP3B1 2363 0.995 - - - - 0.995 - - - - adaptor related protein complex 3 beta 1 subunit
97. thoc7 ENSDARG00000015394 3824 0.995 - - - - 0.995 - - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
98. SLC7A5 ENSDARG00000099265, ENSDARG00000115845 2319 0.995 - - - - 0.995 - - - - solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:ZFIN;Acc:ZDB-GENE-080818-4]
99. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 0.995 - - - - 0.995 - - - - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
100. esf1 ENSDARG00000008740 1206 0.995 - - - - 0.995 - - - - ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4917]

There are 1604 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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