Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nkx2.2a

Gene Name Gene ID Reads Annotation
nkx2.2a ENSDARG00000053298 747 NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]










Genes with expression patterns similar to nkx2.2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkx2.2a ENSDARG00000053298 747 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
2. nkx2.9 ENSDARG00000020332 357 4.165 0.861 0.739 - 0.781 - 0.856 0.928 - - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
3. nkx2.2b ENSDARG00000101549 266 3.541 0.832 - - 0.876 - 0.956 0.877 - - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
4. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 3.535 0.843 0.885 - - - 0.857 0.950 - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
5. urp2 ENSDARG00000067781 85 3.496 0.854 0.850 - - - 0.848 0.944 - - urotensin II-related peptide [Source:ZFIN;Acc:ZDB-GENE-110718-3]
6. cyr61l2 ENSDARG00000099985 725 3.486 0.834 0.892 - - - 0.825 0.935 - - cysteine-rich, angiogenic inducer, 61 like 2 [Source:ZFIN;Acc:ZDB-GENE-060404-5]
7. nkx6.1 ENSDARG00000022569 3779 3.404 0.809 0.747 - - - 0.991 0.857 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
8. pkd2l1 ENSDARG00000022503 372 2.741 0.835 - - - - 0.938 0.968 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
9. si:ch73-265d7.2 ENSDARG00000116713 2142 2.712 0.881 - - - - 0.962 0.869 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
10. cdkl1 ENSDARG00000017329 3345 2.604 0.903 - - - - 0.773 0.928 - - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
11. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 2.586 0.937 - - - - 0.701 0.948 - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
12. zgc:113531 ENSDARG00000038794 2063 2.582 0.817 - - - - 0.825 0.940 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
13. mnx2a ENSDARG00000042106 939 2.57 0.866 - - - - 0.854 0.850 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
14. pkd1b ENSDARG00000033029 461 2.535 - 0.882 - - - 0.814 0.839 - - polycystic kidney disease 1b [Source:ZFIN;Acc:ZDB-GENE-100707-2]
15. MSMP ENSDARG00000105581 254 2.526 0.897 0.878 - - - 0.751 - - - microseminoprotein, prostate associated [Source:HGNC Symbol;Acc:HGNC:29663]
16. ADAMTS3 ENSDARG00000060127 2839 2.521 0.887 - - - - 0.869 0.765 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
17. sst1.1 ENSDARG00000040799 677 2.495 - 0.782 - - - 0.908 0.805 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
18. CU658147.1 CU658147.1 69 2.473 0.784 0.821 - - - - 0.868 - -
19. clu ENSDARG00000010434 498 2.462 0.833 0.734 - - - - 0.895 - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
20. scg2a 800 2.454 0.856 0.701 - - - - 0.897 - - secretogranin II (chromogranin C) a
21. olig2 ENSDARG00000040946 1405 2.416 0.720 - - - - 0.951 0.745 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
22. foxa2 ENSDARG00000003411 2309 2.392 0.706 - - - - 0.822 0.864 - - forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
23. crb1 ENSDARG00000100506, ENSDARG00000110621 373 2.37 0.830 0.770 - - - - 0.770 - - crumbs family member 1, photoreceptor morphogenesis associated [Source:ZFIN;Acc:ZDB-GENE-050208-382]
24. C2CD4A ENSDARG00000061416 61 2.369 - 0.749 - - - 0.763 0.857 - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
25. ntn1b ENSDARG00000022531 248 2.34 0.888 0.714 - - - - 0.738 - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
26. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 2.305 0.745 - - - - 0.793 0.767 - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
27. vax2 ENSDARG00000058702 175 2.292 - 0.749 - 0.801 0.742 - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
28. cadpsa ENSDARG00000043661 160 2.272 - 0.759 - 0.719 - 0.794 - - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
29. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 2.18 - 0.737 - - - 0.731 0.712 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
30. gpr98 gpr98 717 1.852 - - - - - 0.941 0.911 - -
31. gfra3 ENSDARG00000087704 122 1.803 - - - - - 0.944 0.859 - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
32. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.769 0.934 0.835 - - - - - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
33. ascl1a ENSDARG00000038386 1290 1.768 - - - - - 0.947 0.821 - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
34. isl1 ENSDARG00000004023 981 1.747 - 0.820 - - - - 0.927 - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
35. MAPK8IP1 MAPK8IP1 121 1.733 0.927 - - - - 0.806 - - -
36. SYT2 ENSDARG00000014169 265 1.726 - 0.948 - - - - 0.778 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
37. zgc:100906 ENSDARG00000033599 344 1.721 - 0.910 - - - - 0.811 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
38. neurod neurod 1189 1.72 - - - - - 0.902 0.818 - -
39. spon1b ENSDARG00000023694, ENSDARG00000110889 586 1.716 0.791 - - - - - 0.925 - - spondin 1b [Source:ZFIN;Acc:ZDB-GENE-000427-10]
40. SLC5A7 SLC5A7 453 1.712 - 0.819 - - - 0.893 - - -
41. spon1a ENSDARG00000010029 355 1.71 - - - - - 0.797 0.913 - - spondin 1a [Source:ZFIN;Acc:ZDB-GENE-000427-9]
42. fabp7a ENSDARG00000007697 5211 1.705 - - - - - 0.796 0.909 - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
43. CABZ01032454.1 CABZ01032454.1 7 1.701 - 0.802 - - - 0.899 - - -
44. ek1 ENSDARG00000020080 742 1.698 - 0.968 - - - - 0.730 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
45. sema3c ENSDARG00000034300 881 1.697 - 0.930 - - - 0.767 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
46. UNC13A UNC13A 36 1.687 - 0.828 - - - - 0.859 - -
47. prdm8 ENSDARG00000025017 370 1.682 - 0.902 - - - 0.780 - - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
48. celf4 ENSDARG00000070045 1537 1.681 - 0.870 - - 0.811 - - - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
49. dtnbb ENSDARG00000013020 280 1.68 - 0.887 - - - - 0.793 - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
50. shha ENSDARG00000068567, ENSDARG00000111447 1497 1.677 - 0.827 - - - - 0.850 - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
51. SSX2IP SSX2IP 316 1.668 - - - - - 0.851 0.817 - -
52. heyl ENSDARG00000055798, ENSDARG00000112770 76 1.664 - 0.749 - - - - 0.915 - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
53. mvd mvd 105 1.661 0.842 0.819 - - - - - - -
54. c1qa ENSDARG00000044613, ENSDARG00000109639 35 1.66 - 0.835 - - - 0.825 - - - complement component 1, q subcomponent, A chain [Source:ZFIN;Acc:ZDB-GENE-050522-86]
55. pknox2 ENSDARG00000055349 784 1.657 - 0.789 - - - - 0.868 - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
56. wnt4a ENSDARG00000071208 1157 1.656 - - - - - 0.770 0.886 - - wingless-type MMTV integration site family, member 4a [Source:ZFIN;Acc:ZDB-GENE-980526-352]
57. dnm1b ENSDARG00000009281 219 1.653 - 0.895 - - - - 0.758 - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
58. mlc1 ENSDARG00000063026 29 1.649 - 0.749 - - - 0.900 - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:ZFIN;Acc:ZDB-GENE-050419-145]
59. CCDC181 ENSDARG00000062021 77 1.645 0.874 0.771 - - - - - - - coiled-coil domain containing 181 [Source:ZFIN;Acc:ZDB-GENE-060503-312]
60. si:ch211-271g18.2 si:ch211-271g18.2 34 1.642 - - - - - - 0.838 - 0.804
61. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 1.64 - 0.776 - - - - 0.864 - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
62. NPPC ENSDARG00000068126 45 1.637 - - - - - 0.799 0.838 - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
63. unc13c 197 1.632 - 0.790 - - - - 0.842 - - unc-13 homolog C (C. elegans)
64. BX469915.2 BX469915.2 48 1.622 0.763 - - - - - 0.859 - -
65. im:7162084 im:7162084 665 1.617 0.873 - - - - 0.744 - - -
66. ano8a ENSDARG00000076265 20 1.613 - 0.749 - - - 0.864 - - - anoctamin 8a [Source:ZFIN;Acc:ZDB-GENE-070912-583]
67. tmem240 tmem240 180 1.611 - - - - - 0.753 0.858 - -
68. bicc2 ENSDARG00000076557 77 1.611 0.835 - - - - 0.776 - - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
69. hectd2 ENSDARG00000061194 559 1.608 - - - - - 0.783 0.825 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
70. pbx3a ENSDARG00000089262 97 1.605 - - - - - 0.708 0.897 - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
71. CR383676.3_2 CR383676.3_2 9 1.605 - 0.840 - - - 0.765 - - -
72. si:dkey-169l5.3 si:dkey-169l5.3 239 1.6 - 0.749 - - - 0.851 - - -
73. RBBP6_3 RBBP6_3 34 1.598 0.763 0.835 - - - - - - -
74. olfml2ba ENSDARG00000005716 195 1.589 - 0.730 - - - - 0.859 - - olfactomedin-like 2Ba [Source:ZFIN;Acc:ZDB-GENE-041014-329]
75. mapre3a ENSDARG00000020231 100 1.587 - - - - 0.742 0.845 - - - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
76. kif19 ENSDARG00000053026 124 1.587 0.732 - - - - - 0.855 - - kinesin family member 19 [Source:ZFIN;Acc:ZDB-GENE-080215-2]
77. nrsn1 ENSDARG00000111235 123 1.583 - - 0.745 - - - 0.838 - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
78. CASS4 ENSDARG00000006775 760 1.576 - 0.760 - - - - 0.816 - - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
79. lrp8 ENSDARG00000070074, ENSDARG00000116879 323 1.575 - - - 0.701 - 0.874 - - - low density lipoprotein receptor-related protein 8, apolipoprotein e receptor [Source:ZFIN;Acc:ZDB-GENE-050506-134]
80. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.574 0.774 - - - - - 0.800 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
81. gria2b ENSDARG00000052765 188 1.571 - - - - - 0.765 0.806 - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
82. or103-5 ENSDARG00000075128 1 1.569 - - - - - 0.765 - - 0.804 odorant receptor, family C, subfamily 103, member 5 [Source:ZFIN;Acc:ZDB-GENE-070806-52]
83. insm1a ENSDARG00000091756 1838 1.568 0.775 - - - - - 0.793 - - insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
84. si:ch73-389b16.2 ENSDARG00000103802 340 1.567 0.842 - - - - - 0.725 - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
85. ctnnd2b ENSDARG00000003779 964 1.566 - 0.852 - - - - 0.714 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
86. Metazoa_SRP_30 Metazoa_SRP_30 10 1.564 0.842 0.722 - - - - - - -
87. nr2e1 ENSDARG00000017107 340 1.564 - - - - 0.799 0.765 - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
88. zgc:114174 ENSDARG00000057884, ENSDARG00000109852 100 1.561 - 0.828 - - - - 0.733 - - zgc:114174 [Source:ZFIN;Acc:ZDB-GENE-050626-103]
89. calca ENSDARG00000056590 150 1.557 - 0.840 - - - 0.717 - - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
90. SUSD4 ENSDARG00000026335 195 1.548 - 0.749 - - - - 0.799 - - sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
91. CABZ01021538.1 CABZ01021538.1 67 1.547 0.808 - - - - 0.739 - - -
92. CABZ01029738.1 CABZ01029738.1 327 1.543 - - - - - 0.825 0.718 - -
93. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 1.541 0.748 - - - - - 0.793 - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
94. epha3l epha3l 1441 1.54 - 0.772 - - - - 0.768 - -
95. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 1.532 - 0.740 - - - - 0.792 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
96. guk1b ENSDARG00000005776 23 1.531 0.763 - - - - 0.768 - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
97. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 1.53 - - - - - 0.724 0.806 - - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
98. chrm3a ENSDARG00000071091 72 1.528 - - - - - 0.804 0.724 - - cholinergic receptor, muscarinic 3a [Source:ZFIN;Acc:ZDB-GENE-090410-4]
99. smarcd3b ENSDARG00000019969 11 1.528 0.763 - - - - 0.765 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
100. MDH1B ENSDARG00000018008 29 1.528 0.763 - - - - 0.765 - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]

There are 1352 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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