Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nkx1.2lb

Gene Name Gene ID Reads Annotation
nkx1.2lb ENSDARG00000099427 220 NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]










Genes with expression patterns similar to nkx1.2lb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkx1.2lb ENSDARG00000099427 220 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
2. lingo1a ENSDARG00000034165 179 3.528 - 0.881 - - 0.772 0.900 0.975 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
3. scrt2 ENSDARG00000056175 4331 3.36 0.705 0.841 - - - 0.875 0.939 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
4. pcsk1nl ENSDARG00000076170 1232 3.352 0.828 0.772 - - - 0.874 0.878 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
5. slc17a6b ENSDARG00000041150 823 3.287 0.731 0.881 - - - 0.827 0.848 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
6. npffr1l2 ENSDARG00000062631 127 3.287 0.782 0.906 - - - 0.849 0.750 - - neuropeptide FF receptor 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-060526-110]
7. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 3.283 0.702 - - - 0.719 0.904 0.958 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
8. glra1 ENSDARG00000012019 315 3.28 0.799 - - - 0.915 0.824 0.742 - - glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
9. syt11a ENSDARG00000057913 1145 3.247 0.782 0.824 - - - 0.856 0.785 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
10. tmem91 ENSDARG00000068456 81 3.239 0.767 0.881 - - - 0.792 0.799 - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
11. rtn1b ENSDARG00000021143 1682 3.125 0.804 0.766 - - - 0.847 0.708 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
12. cacng2b ENSDARG00000102376 213 2.926 0.751 0.759 0.702 - - - 0.714 - - calcium channel, voltage-dependent, gamma subunit 2b [Source:ZFIN;Acc:ZDB-GENE-090624-3]
13. nxph1 ENSDARG00000033447 182 2.75 0.905 - - - - 0.912 0.933 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
14. nrxn2a ENSDARG00000061454 291 2.734 - 1.000 - - - 0.865 0.869 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
15. arl11l arl11l 31 2.729 - 0.881 - - 0.895 - 0.953 - -
16. her3 ENSDARG00000076857 131 2.72 - 0.881 - - - 0.886 0.953 - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
17. cbln1 ENSDARG00000057296 165 2.704 - 0.942 - - - 0.873 0.889 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
18. SV2B SV2B 208 2.696 - 0.791 - - - 0.922 0.983 - -
19. xkr6 xkr6 286 2.659 0.929 - - - - 0.799 0.931 - -
20. sncgb ENSDARG00000109715 1014 2.632 0.787 - - - - 0.869 0.976 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
21. entpd3 ENSDARG00000035309 263 2.605 - 0.781 - - - 0.871 0.953 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
22. amph ENSDARG00000007663 599 2.595 - 0.791 - - - 0.875 0.929 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
23. sez6l2 ENSDARG00000076052 360 2.581 - 0.792 - - - 0.889 0.900 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
24. stx1b ENSDARG00000000503 2724 2.577 - 0.845 - - - 0.788 0.944 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
25. fez1 ENSDARG00000023174 701 2.575 0.766 - - - - 0.935 0.874 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
26. KCNS3 KCNS3 82 2.57 - 0.881 - - - 0.919 0.770 - -
27. VSTM2B VSTM2B 149 2.55 0.837 - - - - 0.850 0.863 - -
28. zgc:153845 62 2.547 - - 0.769 - - 0.825 0.953 - - zgc:153845
29. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.539 0.712 - - - - 0.845 0.982 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
30. vsnl1a ENSDARG00000023228 1584 2.531 0.775 - - - - 0.866 0.890 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
31. trim46b ENSDARG00000058649 54 2.529 0.715 0.881 - - - - 0.933 - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
32. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.523 0.794 0.881 - - - - 0.848 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
33. syn2a ENSDARG00000045945 434 2.521 0.761 - - - - 0.878 0.882 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
34. GJD2_1 GJD2_1 3045 2.518 0.825 0.881 - - - - 0.812 - -
35. si:ch211-133l11.10 ENSDARG00000005626 381 2.517 0.721 - - - - 0.813 0.983 - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
36. TUBB2A TUBB2A 142 2.511 - 0.881 - - - 0.898 0.732 - -
37. EML6 250 2.507 0.922 - - - - 0.876 0.709 - - echinoderm microtubule associated protein like 6
38. cnrip1a ENSDARG00000091683 1491 2.497 0.715 - - - - 0.917 0.865 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
39. CT025910.1 CT025910.1 143 2.494 - 0.881 - - - 0.895 0.718 - -
40. ppp3ca ENSDARG00000004988 615 2.492 0.785 - - - - 0.842 0.865 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
41. CLIP3 ENSDARG00000054456 734 2.491 0.823 - - - - 0.897 0.771 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
42. gng3 ENSDARG00000009553 2530 2.487 0.710 0.878 - - - - 0.899 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
43. mir10d-1 mir10d-1 860 2.483 0.824 - - - - 0.779 0.880 - -
44. eno2 ENSDARG00000014287 2162 2.479 - - - - 0.781 0.934 0.764 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
45. MAP6 MAP6 643 2.474 - 0.808 - - - 0.827 0.839 - -
46. MAP1A MAP1A 847 2.471 - 0.702 - - - 0.831 0.938 - -
47. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.468 - 0.746 - - - 0.877 0.845 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
48. CABZ01051991.1 CABZ01051991.1 346 2.468 0.913 - - - - 0.798 0.757 - -
49. gfap ENSDARG00000025301 5584 2.465 0.730 - - - - 0.824 0.911 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
50. TRPC4_1 TRPC4_1 212 2.464 0.717 0.881 - - - 0.866 - - -
51. nrxn3b ENSDARG00000062693 192 2.46 - 0.942 - - - 0.816 0.702 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
52. INA INA 950 2.459 0.771 - - - - 0.713 0.975 - -
53. syt13 ENSDARG00000012306 298 2.459 0.797 - - - - 0.873 0.789 - - synaptotagmin XIII [Source:ZFIN;Acc:ZDB-GENE-050417-135]
54. kcnc3a ENSDARG00000055855 1821 2.458 0.742 - - - - 0.768 0.948 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
55. trim2b ENSDARG00000076174 250 2.456 - - - - 0.762 0.821 0.873 - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
56. rgs20 ENSDARG00000038859 331 2.451 0.713 - - - - 0.895 0.843 - - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
57. lrrn3 lrrn3 137 2.45 - - - - 0.760 0.790 0.900 - -
58. jph3 ENSDARG00000102204 175 2.446 0.765 0.881 - - - - 0.800 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
59. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.446 0.802 - - - - 0.823 0.821 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
60. si:ch211-152f6.6 si:ch211-152f6.6 278 2.445 0.797 0.828 - - - - 0.820 - -
61. scg2b ENSDARG00000038574 345 2.441 - - - - 0.840 0.824 0.777 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
62. nadl1.1 1200 2.439 0.841 0.744 - - - - 0.854 - - neural adhesion molecule L1.1, transcript variant X1
63. si:ch73-21g5.7 ENSDARG00000093156 9412 2.438 0.710 - - - - 0.880 0.848 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
64. nptx1l ENSDARG00000074671 569 2.433 - 0.797 - - - 0.897 0.739 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
65. fam219ab ENSDARG00000013813 591 2.431 - 0.881 - - - 0.731 0.819 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
66. layna ENSDARG00000035169 515 2.426 - - - - 0.716 0.776 0.934 - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
67. scn8aa ENSDARG00000005775 792 2.417 - 0.799 - - - 0.728 0.890 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
68. SPOCK1 ENSDARG00000074644 794 2.412 0.826 0.733 - - - - 0.853 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
69. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.407 0.700 - - - - 0.750 0.957 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
70. st6gal1 ENSDARG00000044514 142 2.405 0.796 - - - - 0.852 0.757 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
71. ttc9b ENSDARG00000068421 251 2.39 0.779 0.711 - - - 0.900 - - - tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
72. slc1a2b ENSDARG00000102453 3136 2.385 - 0.713 - - - 0.770 0.902 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
73. unc13c 197 2.363 0.853 0.757 - - - 0.753 - - - unc-13 homolog C (C. elegans)
74. rap2ip rap2ip 681 2.362 - 0.792 - - - 0.784 0.786 - -
75. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 2.354 - 0.881 - - - 0.771 0.702 - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
76. sv2bb ENSDARG00000060711 196 2.352 0.741 0.711 - - - - 0.900 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
77. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.349 0.729 - - - - 0.915 0.705 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
78. st8sia2 ENSDARG00000018788 2183 2.323 0.763 - - - - 0.789 0.771 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
79. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 2.32 0.759 - - - - 0.815 0.746 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
80. hoxa5a ENSDARG00000102501 1667 2.32 0.744 - - - - 0.710 0.866 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
81. SALL2 ENSDARG00000075116 527 2.317 0.744 - - - - 0.771 0.802 - - spalt-like transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030829-32]
82. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.308 0.781 - - - - 0.814 0.713 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
83. stxbp5a ENSDARG00000002656 318 2.306 - 0.705 - - - 0.726 0.875 - - syntaxin binding protein 5a (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-041001-161]
84. scdb ENSDARG00000030265 271 2.297 0.805 0.721 - - - 0.771 - - - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
85. BSN BSN 463 2.294 0.776 - - - 0.704 - 0.814 - -
86. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 2.284 0.709 - - - - 0.748 0.827 - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
87. fam60al 2846 2.269 0.729 - - - - 0.775 0.765 - - family with sequence similarity 60, member A, like
88. kcnj11l ENSDARG00000031438 369 2.254 0.724 - - - - 0.813 0.717 - - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
89. prrt1 ENSDARG00000062208 368 2.243 0.704 - - - - 0.724 0.815 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
90. NPPC_1 NPPC_1 11 1.953 - 1.000 - - - - 0.953 - -
91. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.893 - - - - - 0.934 0.959 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
92. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 1.888 - - - - - 0.889 0.999 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
93. si:ch211-117m20.4 ENSDARG00000094286 7 1.882 0.929 - - - - - 0.953 - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
94. BX530409.1 BX530409.1 65 1.882 0.929 - - - - - 0.953 - -
95. glcea ENSDARG00000005095 33 1.882 0.929 - - - - - 0.953 - - glucuronic acid epimerase a [Source:ZFIN;Acc:ZDB-GENE-040630-9]
96. VSTM5 4 1.882 0.929 - - - - - 0.953 - - V-set and transmembrane domain containing 5
97. rassf4 ENSDARG00000012460 43 1.882 0.929 - - - - - 0.953 - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
98. slco4a1 ENSDARG00000075948 74 1.882 0.929 - - - - - 0.953 - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
99. VOPP1_1 VOPP1_1 73 1.882 0.929 - - - - - 0.953 - -
100. LRFN2 118 1.881 - - - - - 0.947 0.934 - - leucine rich repeat and fibronectin type III domain containing 2

There are 2534 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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