Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nkx1.2la

Gene Name Gene ID Reads Annotation
nkx1.2la ENSDARG00000006350 76 NK1 transcription factor related 2-like,a [Source:ZFIN;Acc:ZDB-GENE-040615-1]










Genes with expression patterns similar to nkx1.2la

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkx1.2la ENSDARG00000006350 76 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NK1 transcription factor related 2-like,a [Source:ZFIN;Acc:ZDB-GENE-040615-1]
2. map6 map6 70 2.434 - - 0.785 - - 0.881 0.768 - -
3. cart4 ENSDARG00000070142 55 1.997 0.997 - - - - - 1.000 - - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
4. si:ch211-250c4.5 ENSDARG00000075943 10 1.979 - - - - 0.979 - 1.000 - - si:ch211-250c4.5 [Source:ZFIN;Acc:ZDB-GENE-081107-33]
5. lrrc48 lrrc48 50 1.903 - - 0.903 - - - 1.000 - -
6. ccdc170 ENSDARG00000016161 18 1.895 - - 0.895 - - - 1.000 - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
7. si:ch211-223a21.3 ENSDARG00000104737 28 1.871 - - - - - - 1.000 - 0.871 si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
8. CABZ01064671.1 ENSDARG00000039935 21 1.837 - - 0.837 - - - 1.000 - -
9. MAP3K2 ENSDARG00000062884 34 1.835 - - 0.835 - - - 1.000 - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
10. ccdc113 ENSDARG00000006981 67 1.827 - - 0.924 - 0.903 - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
11. xrra1 ENSDARG00000089578 18 1.815 - - 0.815 - - - 1.000 - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
12. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1.796 - - - - 0.870 - 0.926 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
13. CMA1_4 CMA1_4 23 1.793 - - 0.793 - - - 1.000 - -
14. atoh7 ENSDARG00000069552 254 1.775 - - - - - - 1.000 0.775 - atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
15. SPIN4 SPIN4 120 1.739 0.903 - - - - - 0.836 - -
16. FAM196A 82 1.713 0.932 - - - - - 0.781 - - family with sequence similarity 196 member A
17. KCNG2 ENSDARG00000035961 58 1.656 - - - - 0.839 - - - 0.817 potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
18. clock3 clock3 136 1.655 0.865 - - - 0.790 - - - -
19. slitrk2 ENSDARG00000006636 40 1.638 - - - - - - 0.929 - 0.709 SLIT and NTRK-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-080327-7]
20. enthd2 481 1.628 0.895 - - - - - - - 0.733 ENTH domain containing 2
21. zgc:193811 ENSDARG00000076745 72 1.622 - - 0.900 - - - 0.722 - - zgc:193811 [Source:ZFIN;Acc:ZDB-GENE-081022-43]
22. SACS_1 SACS_1 234 1.601 0.721 - - - - - 0.880 - -
23. RIBC2 ENSDARG00000075177 445 1.589 - - - - 0.701 - 0.888 - - RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
24. plch2a ENSDARG00000059960 222 1.583 0.866 - 0.717 - - - - - - phospholipase C, eta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6367]
25. hoxc13b ENSDARG00000113877 549 1.568 - - 0.781 - 0.787 - - - - homeobox C13b [Source:ZFIN;Acc:ZDB-GENE-000822-5]
26. prdm13 ENSDARG00000078701 205 1.558 - - - - - - 0.836 - 0.722 PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
27. adora2aa ENSDARG00000033706, ENSDARG00000114856 144 1.546 - - - - - 0.784 - - 0.762 adenosine A2a receptor a [Source:ZFIN;Acc:ZDB-GENE-080723-28]
28. pard3 pard3 161 1.545 - - - - 0.732 - 0.813 - -
29. si:dkey-247i3.4 si:dkey-247i3.4 89 1.54 - - - - 0.742 - 0.798 - -
30. dyx1c1 dyx1c1 36 1.537 - - 0.722 - 0.815 - - - -
31. nsl1 ENSDARG00000024471 1269 1.531 0.790 - - - - - 0.741 - - NSL1, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-041014-362]
32. btbd3b ENSDARG00000087517 107 1.506 - - 0.750 - - - 0.756 - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
33. mroh1 ENSDARG00000016573 287 1.492 0.704 - - - - 0.788 - - - maestro heat-like repeat family member 1 [Source:ZFIN;Acc:ZDB-GENE-090806-2]
34. foxn4 ENSDARG00000010591 2332 1.478 0.704 - - - - - 0.774 - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
35. ZNF740 ZNF740 676 1.444 0.717 - - - - 0.727 - - -
36. epdr1 ENSDARG00000045420 132 1.428 - - - - - 0.719 - - 0.709 ependymin related 1 [Source:ZFIN;Acc:ZDB-GENE-040718-113]
37. npas4a ENSDARG00000055752 5 1 - - - - - - 1.000 - - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
38. si:dkey-271j15.3 ENSDARG00000091627 88 1 - - - - - - 1.000 - - si:dkey-271j15.3 [Source:ZFIN;Acc:ZDB-GENE-100921-27]
39. ZNF512B ENSDARG00000071055 7 1 - - - - - - 1.000 - - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
40. wu:fd60c08 wu:fd60c08 35 1 - - - - - - 1.000 - -
41. si:dkey-20j10.2 si:dkey-20j10.2 8 1 - - - - - - 1.000 - -
42. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - - 1.000 - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
43. slc25a3a ENSDARG00000027424 11 1 - - - - - - 1.000 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1673]
44. si:dkey-167k11.1 si:dkey-167k11.1 14 1 - - - - - - 1.000 - -
45. ZNF70 ZNF70 2 1 - - - - - - 1.000 - -
46. TBC1D10C ENSDARG00000037408 18 1 - - - - - - 1.000 - - TBC1 domain family, member 10C [Source:ZFIN;Acc:ZDB-GENE-130125-1]
47. MYO9B ENSDARG00000078313 97 1 - - - - - - 1.000 - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
48. gaa ENSDARG00000090714 19 1 - - - - - - 1.000 - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
49. CU468142.1 CU468142.1 6 1 - - - - - - 1.000 - -
50. kif20a ENSDARG00000044491 12 1 - - - - - - 1.000 - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
51. tbc1d22b ENSDARG00000026988 18 1 - - - - - - 1.000 - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
52. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1 - - - - - - 1.000 - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
53. CU633740.1 CU633740.1 8 1 - - - - - - 1.000 - -
54. si:ch73-83c10.2 si:ch73-83c10.2 22 1 - - - - - - 1.000 - -
55. ZP2_1 ZP2_1 7 1 - - - - - - 1.000 - -
56. CU693369.1 CU693369.1 2 1 - - - - - - 1.000 - -
57. DBNDD1 DBNDD1 43 1 - - - - - - 1.000 - -
58. WDR63 ENSDARG00000105093 13 1 - - - - - - 1.000 - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
59. cyp2k6 ENSDARG00000009874, ENSDARG00000098995 2 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily K, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1571]
60. EIF4G3 EIF4G3 24 1 - - - - - - 1.000 - -
61. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - - - - - - 1.000 - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
62. zgc:195633_1 142 1 - - - - - - 1.000 - - zgc:195633
63. CNTNAP3 ENSDARG00000067824 25 1 - - - - - - 1.000 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
64. si:ch1073-307h15.1 si:ch1073-307h15.1 2 1 - - - - - - 1.000 - -
65. si:dkey-199m13.8 si:dkey-199m13.8 61 1 - - - - - - 1.000 - -
66. zeb1a ENSDARG00000016788 48 1 - - - - - - 1.000 - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
67. irak1 ENSDARG00000025949 19 1 - - - - - - 1.000 - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
68. SYNPR ENSDARG00000037587 20 1 - - - - - - 1.000 - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
69. pcyox1 ENSDARG00000103052 20 1 - - - - - - 1.000 - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
70. CR391967.1 CR391967.1 135 1 - - - - - - 1.000 - -
71. BPIFC BPIFC 11 1 - - - - - - 1.000 - -
72. CMKLR1_1 CMKLR1_1 2 1 - - - - - - 1.000 - -
73. itga6l ENSDARG00000056018 1 1 - - - - - - 1.000 - - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
74. BX323876.2 ENSDARG00000104577 62 1 - - - - - - 1.000 - -
75. edar ENSDARG00000099088 1 1 - - - - - - 1.000 - - ectodysplasin A receptor [Source:ZFIN;Acc:ZDB-GENE-070117-2062]
76. sp5l ENSDARG00000115868 361 1 - - - - - - 1.000 - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
77. si:dkey-258f14.3 ENSDARG00000075974 9 1 - - - - - - 1.000 - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
78. BX004873.3 BX004873.3 59 1 - - - - - - 1.000 - -
79. tbkbp1 ENSDARG00000061473 24 1 - - - - - - 1.000 - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
80. kif3cb ENSDARG00000079500 935 1 - - - - - - 1.000 - - kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
81. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 - - - - - - 1.000 - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
82. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - - - 1.000 - -
83. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 1 - - - - - - 1.000 - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
84. FNDC7_1 FNDC7_1 3 1 - - - - - - 1.000 - -
85. BX005421.3 ENSDARG00000114309 7 1 - - - - - - 1.000 - -
86. C6H22orf23 C6H22orf23 15 1 - - - - - - 1.000 - -
87. ciz1a ENSDARG00000089781 20 1 - - - - - - 1.000 - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
88. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - - - 1.000 - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
89. si:dkey-239j18.3 ENSDARG00000089806 12918 1 - - - - - - 1.000 - - si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
90. nfatc1 ENSDARG00000036168 16 1 - - - - - - 1.000 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
91. CIT_1 CIT_1 6 1 - - - - - - 1.000 - -
92. ptf1a ENSDARG00000014479 349 1 - - - - - - 1.000 - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
93. PLCXD1_2 PLCXD1_2 9 1 - - - - - - 1.000 - -
94. TRPC4_1 TRPC4_1 212 1 - - - - - - 1.000 - -
95. si:dkey-189j19.1 si:dkey-189j19.1 0 1 - - - - - - 1.000 - -
96. ccdc24 ENSDARG00000038793 7 1 - - - - - - 1.000 - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
97. rcv1 rcv1 77 1 - - - - - - 1.000 - -
98. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - - - - - - 1.000 - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
99. hapln4 ENSDARG00000018542 10 1 - - - - - - 1.000 - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
100. gpr19 ENSDARG00000102226 17 1 - - - - - - 1.000 - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]

There are 1145 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA