Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nkrf

Gene Name Gene ID Reads Annotation
nkrf ENSDARG00000100536 1873 NFKB repressing factor [Source:ZFIN;Acc:ZDB-GENE-030616-73]










Genes with expression patterns similar to nkrf

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkrf ENSDARG00000100536 1873 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NFKB repressing factor [Source:ZFIN;Acc:ZDB-GENE-030616-73]
2. arhgap27 ENSDARG00000104255 439 2.362 0.735 0.755 0.872 - - - - - - Rho GTPase activating protein 27 [Source:ZFIN;Acc:ZDB-GENE-030131-3922]
3. rerea ENSDARG00000077353 4162 1.798 - - 0.802 0.996 - - - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
4. CYP27A1_1 CYP27A1_1 329 1.736 - 0.850 0.886 - - - - - -
5. CABZ01073032.1 CABZ01073032.1 125 1.699 - 0.812 0.887 - - - - - -
6. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.658 - - 0.878 - - - 0.780 - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
7. trappc2 ENSDARG00000097660 760 1.647 - - 0.857 - - - 0.790 - - trafficking protein particle complex 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1266]
8. tmem206 ENSDARG00000012271 508 1.643 - 0.786 0.857 - - - - - - transmembrane protein 206 [Source:ZFIN;Acc:ZDB-GENE-040426-1173]
9. F8A3 F8A3 646 1.635 - - 0.903 - - - - - 0.732
10. IWS1 2428 1.622 - - 0.843 - - 0.779 - - - IWS1, SUPT6H interacting protein, transcript variant X2
11. dact1 ENSDARG00000101635 1303 1.619 - - 0.902 - - - 0.717 - - dishevelled-binding antagonist of beta-catenin 1 [Source:ZFIN;Acc:ZDB-GENE-040623-3]
12. PLCE1 ENSDARG00000087921 277 1.607 - 0.720 0.887 - - - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
13. ZNF337_25 ZNF337_25 1713 1.605 - 0.754 0.851 - - - - - -
14. alg6 ENSDARG00000017617 483 1.599 - 0.714 0.885 - - - - - - asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-040808-45]
15. exoc2 ENSDARG00000055610, ENSDARG00000109455 950 1.597 - - 0.889 - - - 0.708 - - exocyst complex component 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1160]
16. ctdp1 ENSDARG00000017522 731 1.585 - 0.721 0.864 - - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040720-1]
17. kmt2e ENSDARG00000007523 1851 1.576 - - - - - - 0.824 - 0.752 lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
18. ncoa3 ENSDARG00000077404 1957 1.571 - 0.722 0.849 - - - - - - nuclear receptor coactivator 3 [Source:ZFIN;Acc:ZDB-GENE-051107-8]
19. cbl ENSDARG00000009958 1321 1.565 - 0.744 - - - - 0.821 - - Cbl proto-oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041114-207]
20. styk1 1199 1.558 0.737 - 0.821 - - - - - - serine/threonine/tyrosine kinase 1
21. IER2 IER2 604 1.555 - - 0.847 - - - - - 0.708
22. pcl pcl 2862 1.55 0.720 - 0.830 - - - - - -
23. ECI2 ENSDARG00000102412 848 1.54 0.804 - - - - - 0.736 - - enoyl-CoA delta isomerase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-392]
24. CASK CASK 1750 1.537 - - 0.830 - - - 0.707 - -
25. smarca4 smarca4 9726 1.508 - - - - - 0.793 0.715 - -
26. tmem198a ENSDARG00000042115 1694 1.506 - - - - - 0.750 - - 0.756 transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
27. zbtb5 1484 1.504 - - - - - 0.794 - 0.710 - zinc finger and BTB domain containing 5
28. nans nans 1365 1.504 - - - - - 0.803 - - 0.701
29. efna3b ENSDARG00000098295 319 1.498 - 0.733 - - - - - - 0.765 ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]
30. C7H4orf48 C7H4orf48 1455 1.488 - 0.721 - - - - - - 0.767
31. wu:fc26g07 wu:fc26g07 1165 1.487 - 0.731 - - - - 0.756 - -
32. akap11 ENSDARG00000075435 654 1.483 0.748 - - - - 0.735 - - - A kinase (PRKA) anchor protein 11 [Source:ZFIN;Acc:ZDB-GENE-090804-1]
33. BSN BSN 463 1.475 - - - - - - - 0.713 0.762
34. homez homez 1875 1.464 - - 0.742 - - 0.722 - - -
35. lrp12 ENSDARG00000098845 999 1.461 - - - - - 0.752 0.709 - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
36. prdx6 ENSDARG00000043511, ENSDARG00000116085 3456 1.46 - - 0.732 - - - - - 0.728 peroxiredoxin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1778]
37. rnf146 ENSDARG00000089981 715 1.456 - 0.720 - - - - 0.736 - - ring finger protein 146 [Source:ZFIN;Acc:ZDB-GENE-030131-5997]
38. syt1a ENSDARG00000030614 542 1.453 - - - - - 0.704 - - 0.749 synaptotagmin Ia [Source:ZFIN;Acc:ZDB-GENE-040718-165]
39. CCNYL1 ENSDARG00000099692 1330 1.449 - 0.715 - - - - - - 0.734 cyclin Y-like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-732]
40. hoxd9a ENSDARG00000059274 3414 1.447 - - - - - 0.729 0.718 - - homeobox D9a [Source:ZFIN;Acc:ZDB-GENE-990415-121]
41. tcf20 ENSDARG00000078348 1051 1.434 - - - - - 0.724 0.710 - - transcription factor 20 [Source:ZFIN;Acc:ZDB-GENE-110411-97]
42. zgc:113348 ENSDARG00000103795 1351 1.429 - 0.701 - - - - - 0.728 - zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
43. CU929431.1 CU929431.1 2234 0.999 - - - 0.999 - - - - -
44. pnpla7a ENSDARG00000062986 1793 0.999 - - - 0.999 - - - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
45. AMBRA1_1 AMBRA1_1 2179 0.999 - - - 0.999 - - - - -
46. C3H19orf43 C3H19orf43 2961 0.999 - - - 0.999 - - - - -
47. pycr1 pycr1 1258 0.999 - - - 0.999 - - - - -
48. idh3g ENSDARG00000023648 4877 0.998 - - - 0.998 - - - - - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
49. CU463857.1 CU463857.1 5541 0.998 - - - 0.998 - - - - -
50. hoxb4a ENSDARG00000013533 3857 0.998 - - - 0.998 - - - - - homeobox B4a [Source:ZFIN;Acc:ZDB-GENE-990415-105]
51. b3gnt5b ENSDARG00000004396 1152 0.998 - - - 0.998 - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5b [Source:ZFIN;Acc:ZDB-GENE-041010-166]
52. ARHGAP23 ARHGAP23 3946 0.998 - - - 0.998 - - - - -
53. EPT1 EPT1 1912 0.998 - - - 0.998 - - - - -
54. map3k1 ENSDARG00000098405 3043 0.998 - - - 0.998 - - - - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
55. camsap2 camsap2 1448 0.998 - - - 0.998 - - - - -
56. mpi ENSDARG00000030786 3052 0.998 - - - 0.998 - - - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
57. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 0.998 - - - 0.998 - - - - - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
58. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.998 - - - 0.998 - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
59. mertk mertk 1232 0.998 - - - 0.998 - - - - -
60. alas1 ENSDARG00000021059 4892 0.998 - - - 0.998 - - - - - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
61. herpud2 ENSDARG00000021033 1800 0.998 - - - 0.998 - - - - - HERPUD family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-868]
62. FAM35A FAM35A 1091 0.998 - - - 0.998 - - - - -
63. tchp ENSDARG00000035605 1695 0.998 - - - 0.998 - - - - - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
64. EIF1B ENSDARG00000029445 5034 0.998 - - - 0.998 - - - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
65. ppp6c ENSDARG00000002949 2948 0.998 - - - 0.998 - - - - - protein phosphatase 6, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-949]
66. dre-mir-26a-2 ENSDARG00000086601 1267 0.998 - - - 0.998 - - - - - dre-mir-26a-2 [Source:miRBase;Acc:MI0001925]
67. camkmt ENSDARG00000095224 1204 0.998 - - - 0.998 - - - - - calmodulin-lysine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-090313-49]
68. slc15a4 ENSDARG00000102612 1096 0.998 - - - 0.998 - - - - - solute carrier family 15 (oligopeptide transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1047]
69. CR388095.3 CR388095.3 2548 0.997 - - - 0.997 - - - - -
70. blcap ENSDARG00000052073 8646 0.997 - - - 0.997 - - - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
71. rhoae rhoae 4047 0.997 - - - 0.997 - - - - -
72. dcxr ENSDARG00000079271 3289 0.997 - - - 0.997 - - - - - dicarbonyl/L-xylulose reductase [Source:ZFIN;Acc:ZDB-GENE-030131-7002]
73. serbp1a ENSDARG00000074242 10818 0.997 - - - 0.997 - - - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
74. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 0.997 - - - 0.997 - - - - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
75. txndc5 ENSDARG00000009342 5387 0.996 - - - 0.996 - - - - - thioredoxin domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1951]
76. acsl3b ENSDARG00000014674 3748 0.996 - - - 0.996 - - - - - acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
77. gap43 ENSDARG00000099744 4114 0.996 - - - 0.996 - - - - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
78. CNDP1 CNDP1 6456 0.995 - - - 0.995 - - - - -
79. ADAMTS3 ENSDARG00000060127 2839 0.995 - - - 0.995 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
80. pcmt ENSDARG00000015201 5132 0.995 - - - 0.995 - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
81. fermt2 ENSDARG00000020242 9351 0.995 - - - 0.995 - - - - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
82. SERBP1 SERBP1 9276 0.995 - - - 0.995 - - - - -
83. slmo2 slmo2 5559 0.995 - - - 0.995 - - - - -
84. zgc:100919 zgc:100919 7746 0.995 - - - 0.995 - - - - -
85. prpf40a ENSDARG00000058467 6565 0.995 - - - 0.995 - - - - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
86. cul4b ENSDARG00000060510 6053 0.994 - - - 0.994 - - - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
87. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 0.994 - - - 0.994 - - - - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
88. smc1al ENSDARG00000058203 8838 0.993 - - - 0.993 - - - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
89. AGO1 ENSDARG00000092644 4521 0.991 - - - 0.991 - - - - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
90. tox ENSDARG00000032317 9126 0.991 - - - 0.991 - - - - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
91. tuba1c ENSDARG00000055216 8384 0.99 - - - 0.990 - - - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
92. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 0.989 - - - 0.989 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
93. tomm5 ENSDARG00000068265 11813 0.988 - - - 0.988 - - - - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
94. myom1a ENSDARG00000061249 10230 0.986 - - - 0.986 - - - - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
95. eif2s3 ENSDARG00000008292 17051 0.978 - - - 0.978 - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
96. hmgb1b ENSDARG00000030479 10398 0.977 - - - 0.977 - - - - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
97. fahd2a ENSDARG00000103759 9581 0.976 - - - 0.976 - - - - - fumarylacetoacetate hydrolase domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-040426-2499]
98. serpina1 ENSDARG00000090286 8108 0.975 - - - 0.975 - - - - - serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1421]
99. col18a1 col18a1 20555 0.97 - - - 0.970 - - - - -
100. ywhabb ENSDARG00000075758 23104 0.967 - - - 0.967 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]

There are 958 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA