Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nkd3_1

Gene Name Gene ID Reads Annotation
nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]










Genes with expression patterns similar to nkd3_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-16j24.1 2 2 - - 1.000 - - - 1.000 - - si:dkey-16j24.1, transcript variant X1
2. nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 2 - - 1.000 - - - 1.000 - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
3. si:ch211-202m22.1 ENSDARG00000094491 24 2 - - 1.000 - - - 1.000 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
4. 5S_rRNA_10 5S_rRNA_10 2 2 - - 1.000 - - - 1.000 - -
5. si:dkey-4p15.5 ENSDARG00000086272 7 2 - - 1.000 - - - 1.000 - - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
6. si:ch211-250m6.8 si:ch211-250m6.8 51 1.893 - - 0.893 - - - 1.000 - -
7. EDN3 14 1.846 - - 0.846 - - - 1.000 - - endothelin 3
8. CR352265.1 ENSDARG00000062758 39 1.707 - - 0.917 - - - 0.790 - -
9. CU695076.1 CU695076.1 7 1 - - 1.000 - - - - - -
10. alkbh7 ENSDARG00000037906 9 1 - - - - - - 1.000 - - alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
11. LAMA3 ENSDARG00000071462 5 1 - - - - - - 1.000 - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
12. STOX2 STOX2 0 1 - - 1.000 - - - - - -
13. U4_1 U4_1 2 1 - - 1.000 - - - - - -
14. CR589947.1 ENSDARG00000079269 5 1 - - - - - - 1.000 - -
15. zgc:174642_2 zgc:174642_2 1 1 - - 1.000 - - - - - -
16. dock11 ENSDARG00000062485 17 1 - - - - - - 1.000 - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
17. zgc:173619_1 2 1 - - - - - - 1.000 - - zgc:173619
18. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - 1.000 - - si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
19. cyp7a1a cyp7a1a 1 1 - - - - - - 1.000 - -
20. si:ch211-113a14.17 15 1 - - - - - - 1.000 - - si:ch211-113a14.17
21. si:rp71-1h20.2 si:rp71-1h20.2 0 1 - - 1.000 - - - - - -
22. zgc:173593 ENSDARG00000077360 10 1 - - - - - - 1.000 - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
23. si:dkey-115f9.2 si:dkey-115f9.2 18 1 - - - - - - 1.000 - -
24. CR942805.3 CR942805.3 7 1 - - - - - - 1.000 - -
25. si:dkey-179j5.5 ENSDARG00000074538, ENSDARG00000116016, ENSDARG00000116908 1 1 - - - - - - 1.000 - - si:dkey-179j5.5 [Source:ZFIN;Acc:ZDB-GENE-070705-320]
26. mxd ENSDARG00000023369 8 1 - - 1.000 - - - - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
27. ggh ENSDARG00000037176 9 1 - - - - - - 1.000 - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
28. SNTB2 ENSDARG00000051763 2 1 - - - - - - 1.000 - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
29. CR626884.3 ENSDARG00000104648 1 1 - - 1.000 - - - - - -
30. CR855327.1 CR855327.1 6 1 - - - - - - 1.000 - -
31. CR536621.1 CR536621.1 2 1 - - 1.000 - - - - - -
32. sumo2a ENSDARG00000104390 4 1 - - - - - - 1.000 - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
33. si:ch211-215m21.27 si:ch211-215m21.27 3 1 - - 1.000 - - - - - -
34. pcdh2g12 5 1 - - 1.000 - - - - - - protocadherin 2 gamma 12
35. CABZ01012080.1 CABZ01012080.1 10 1 - - 1.000 - - - - - -
36. si:ch211-196h16.4 ENSDARG00000094782 0 1 - - 1.000 - - - - - - si:ch211-196h16.4 [Source:ZFIN;Acc:ZDB-GENE-081029-1]
37. lrp6 ENSDARG00000100143 1 1 - - - - - - 1.000 - - low density lipoprotein receptor-related protein 6 [Source:ZFIN;Acc:ZDB-GENE-090821-1]
38. si:ch211-175f12.2 ENSDARG00000095831 1 1 - - - - - - 1.000 - - si:ch211-175f12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-220]
39. C12H17orf70 C12H17orf70 25 1 - - - - - - 1.000 - -
40. tyro3 ENSDARG00000005356 4 1 - - 1.000 - - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
41. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - - 1.000 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
42. ripply3 ENSDARG00000036974 30 1 - - - - - - 1.000 - - ripply transcriptional repressor 3 [Source:ZFIN;Acc:ZDB-GENE-060113-3]
43. FHDC1 ENSDARG00000074812 2 1 - - 1.000 - - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
44. GARNL3 GARNL3 1 1 - - 1.000 - - - - - -
45. si:ch211-202a12.8 si:ch211-202a12.8 2 1 - - - - - - 1.000 - -
46. RASAL1 0 1 - - 1.000 - - - - - - RAS protein activator like 1
47. PEG3_36 PEG3_36 3 1 - - 1.000 - - - - - -
48. zgc:136902 zgc:136902 4 1 - - - - - - 1.000 - -
49. rdh1 ENSDARG00000017882 24 1 - - - - - - 1.000 - - retinol dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-030912-15]
50. CR407588.1 ENSDARG00000115460 9 1 - - - - - - 1.000 - - SH3 and SYLF domain containing 1 [Source:NCBI gene;Acc:566522]
51. si:dkeyp-34c12.1 ENSDARG00000071083, ENSDARG00000113229 6 1 - - 1.000 - - - - - - si:dkeyp-34c12.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5347]
52. abhd10a ENSDARG00000076435 3 1 - - 1.000 - - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
53. CABZ01088508.1 CABZ01088508.1 0 1 - - 1.000 - - - - - -
54. STRC ENSDARG00000105391 10 1 - - 1.000 - - - - - - stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
55. zgc:66484 ENSDARG00000030478 167 1 - - - - - - 1.000 - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
56. si:ch211-181l5.5 si:ch211-181l5.5 0 1 - - 1.000 - - - - - -
57. syne2a_1 0 1 - - 1.000 - - - - - - spectrin repeat containing, nuclear envelope 2a
58. efhb ENSDARG00000069703 9 1 - - - - - - 1.000 - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
59. panx3 ENSDARG00000004627 7 1 - - 1.000 - - - - - - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
60. adcy1a ENSDARG00000069026 1 1 - - - - - - 1.000 - - adenylate cyclase 1a [Source:ZFIN;Acc:ZDB-GENE-070705-302]
61. CCDC171 ENSDARG00000027381 3 1 - - 1.000 - - - - - - coiled-coil domain containing 171 [Source:ZFIN;Acc:ZDB-GENE-110411-270]
62. si:dkey-102m7.3 ENSDARG00000100366 27 1 - - - - - - 1.000 - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
63. C17H8orf74 C17H8orf74 4 1 - - - - - - 1.000 - -
64. CACNA2D1_1 ENSDARG00000073752 2 1 - - 1.000 - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
65. BX927253.1 ENSDARG00000096072 1 1 - - 1.000 - - - - - -
66. si:dkeyp-68a7.5 si:dkeyp-68a7.5 6 1 - - 1.000 - - - - - -
67. pou4f3 ENSDARG00000006206 8 1 - - 1.000 - - - - - - POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]
68. NUGGC NUGGC 9 1 - - - - - - 1.000 - -
69. MYO7B MYO7B 8 1 - - - - - - 1.000 - -
70. HTRA2_8 HTRA2_8 0 1 - - 1.000 - - - - - -
71. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - 1.000 - - - - - - si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
72. gper gper 4 1 - - - - - - 1.000 - -
73. dnah7 ENSDARG00000060165 21 1 - - - - - - 1.000 - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
74. ttc6 ENSDARG00000104125 7 1 - - 1.000 - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
75. si:dkey-25o1.4 si:dkey-25o1.4 1 1 - - - - - - 1.000 - -
76. sftpba ENSDARG00000094708 2 1 - - - - - - 1.000 - - surfactant protein Ba [Source:ZFIN;Acc:ZDB-GENE-091204-378]
77. si:ch211-160d14.9 8 1 - - - - - - 1.000 - - si:ch211-160d14.9, transcript variant X1
78. BX530067.1 BX530067.1 20 1 - - - - - - 1.000 - -
79. zgc:174311 zgc:174311 3 1 - - 1.000 - - - - - -
80. CU302326.3 CU302326.3 6 1 - - - - - - 1.000 - -
81. GBF1 ENSDARG00000027016 30 1 - - - - - - 1.000 - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
82. il10 ENSDARG00000078147 3 1 - - - - - - 1.000 - - interleukin 10 [Source:ZFIN;Acc:ZDB-GENE-051111-1]
83. CU138503.2 CU138503.2 0 1 - - 1.000 - - - - - -
84. si:dkey-211g8.6 ENSDARG00000063088 19 1 - - - - - - 1.000 - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
85. CABZ01087111.1 CABZ01087111.1 42 1 - - 1.000 - - - - - -
86. si:ch211-67e16.10 si:ch211-67e16.10 2 1 - - - - - - 1.000 - -
87. hsf5 ENSDARG00000104686 9 1 - - 1.000 - - - - - - heat shock transcription factor family member 5 [Source:ZFIN;Acc:ZDB-GENE-070410-42]
88. si:dkey-211e20.3 si:dkey-211e20.3 1 1 - - 1.000 - - - - - -
89. hbaa2 ENSDARG00000069735 10 1 - - 1.000 - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
90. si:dkey-148a12.2 si:dkey-148a12.2 1 1 - - 1.000 - - - - - -
91. CU468041.1 ENSDARG00000092125 1 1 - - 1.000 - - - - - -
92. epha6 ENSDARG00000022971 52 1 - - - - - - 1.000 - - eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
93. GBE1_1 GBE1_1 1 1 - - - - - - 1.000 - -
94. mir30b 4 1 - - - - - - 1.000 - - microRNA 30b
95. CR626874.1 ENSDARG00000100141 55 1 - - - - - - 1.000 - -
96. nfixb ENSDARG00000061836 7 1 - - - - - - 1.000 - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
97. fn3krp ENSDARG00000098208 4 1 - - 1.000 - - - - - - fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
98. cpn1_1 ENSDARG00000005185, ENSDARG00000096728 2 1 - - - - - - 1.000 - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
99. gata2b ENSDARG00000009094 16 1 - - 1.000 - - - - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
100. TRIM35_6 TRIM35_6 1 1 - - - - - - 1.000 - -

There are 540 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA