Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nkd3_1

Gene Name Gene ID Reads Annotation
nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]










Genes with expression patterns similar to nkd3_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-4p15.5 ENSDARG00000086272 7 2 - - 1.000 - - - 1.000 - - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
2. 5S_rRNA_10 5S_rRNA_10 2 2 - - 1.000 - - - 1.000 - -
3. si:ch211-202m22.1 ENSDARG00000094491 24 2 - - 1.000 - - - 1.000 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
4. nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 2 - - 1.000 - - - 1.000 - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
5. si:dkey-16j24.1 2 2 - - 1.000 - - - 1.000 - - si:dkey-16j24.1, transcript variant X1
6. si:ch211-250m6.8 si:ch211-250m6.8 51 1.893 - - 0.893 - - - 1.000 - -
7. EDN3 14 1.846 - - 0.846 - - - 1.000 - - endothelin 3
8. CR352265.1 ENSDARG00000062758 39 1.707 - - 0.917 - - - 0.790 - -
9. pou4f3 ENSDARG00000006206 8 1 - - 1.000 - - - - - - POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]
10. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - - 1.000 - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
11. BX321870.1 ENSDARG00000098519 9 1 - - - - - - 1.000 - -
12. zgc:172014 ENSDARG00000101775 3 1 - - - - - - 1.000 - - zgc:172014 [Source:ZFIN;Acc:ZDB-GENE-080215-22]
13. unc5da ENSDARG00000092722 8 1 - - 1.000 - - - - - - unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE-080908-2]
14. CU570791.1 ENSDARG00000098597 4 1 - - - - - - 1.000 - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
15. zgc:174642_2 zgc:174642_2 1 1 - - 1.000 - - - - - -
16. abhd10a ENSDARG00000076435 3 1 - - 1.000 - - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
17. CR381673.2 ENSDARG00000103241 7 1 - - - - - - 1.000 - -
18. si:dkey-176f19.7 ENSDARG00000103348 10 1 - - - - - - 1.000 - - si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
19. FHDC1 ENSDARG00000074812 2 1 - - 1.000 - - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
20. cfhl3 ENSDARG00000104205, ENSDARG00000115822 1 1 - - - - - - 1.000 - - complement factor H like 3 [Source:ZFIN;Acc:ZDB-GENE-050208-423]
21. CR626874.1 ENSDARG00000100141 55 1 - - - - - - 1.000 - -
22. cabp5a ENSDARG00000002576 14 1 - - - - - - 1.000 - - calcium binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1655]
23. CR626884.3 ENSDARG00000104648 1 1 - - 1.000 - - - - - -
24. BX119910.13 BX119910.13 4 1 - - 1.000 - - - - - -
25. si:dkey-177p2.15p si:dkey-177p2.15p 20 1 - - 1.000 - - - - - -
26. 5S_rRNA_19 5S_rRNA_19 1 1 - - 1.000 - - - - - -
27. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - 1.000 - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
28. BX927253.1 ENSDARG00000096072 1 1 - - 1.000 - - - - - -
29. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 1 - - 1.000 - - - - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
30. abcg2a ENSDARG00000100075 2 1 - - 1.000 - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2a [Source:ZFIN;Acc:ZDB-GENE-050517-35]
31. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - 1.000 - -
32. slc5a12 ENSDARG00000005004 15 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
33. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - - 1.000 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
34. zgc:162322 zgc:162322 1 1 - - 1.000 - - - - - -
35. BX530067.1 BX530067.1 20 1 - - - - - - 1.000 - -
36. pdk2 pdk2 32 1 - - - - - - 1.000 - -
37. FP340264.1 FP340264.1 0 1 - - 1.000 - - - - - -
38. si:ch211-244b2.3 ENSDARG00000069244 19 1 - - - - - - 1.000 - - si:ch211-244b2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4737]
39. si:dkey-164k14.1 si:dkey-164k14.1 5 1 - - 1.000 - - - - - -
40. rdh1 ENSDARG00000017882 24 1 - - - - - - 1.000 - - retinol dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-030912-15]
41. CU468041.1 ENSDARG00000092125 1 1 - - 1.000 - - - - - -
42. CU138503.2 CU138503.2 0 1 - - 1.000 - - - - - -
43. BX324198.1 BX324198.1 12 1 - - - - - - 1.000 - -
44. gucy2f ENSDARG00000025504 6 1 - - - - - - 1.000 - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
45. tlr2 ENSDARG00000037758, ENSDARG00000116961 15 1 - - - - - - 1.000 - - toll-like receptor 2 [Source:ZFIN;Acc:ZDB-GENE-040219-6]
46. iffo2a ENSDARG00000062101, ENSDARG00000111078 0 1 - - 1.000 - - - - - - intermediate filament family orphan 2a [Source:ZFIN;Acc:ZDB-GENE-090313-342]
47. CR388416.3 CR388416.3 1 1 - - - - - - 1.000 - -
48. BX927369.5 BX927369.5 1 1 - - - - - - 1.000 - -
49. syne2a_1 0 1 - - 1.000 - - - - - - spectrin repeat containing, nuclear envelope 2a
50. CR356247.1 CR356247.1 2 1 - - 1.000 - - - - - -
51. mespba ENSDARG00000030347, ENSDARG00000110553 1 1 - - - - - - 1.000 - - mesoderm posterior ba [Source:ZFIN;Acc:ZDB-GENE-000406-9]
52. grifin ENSDARG00000033382 141 1 - - - - - - 1.000 - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
53. U1_7 U1_7 0 1 - - 1.000 - - - - - -
54. si:ch211-201b11.3 si:ch211-201b11.3 2 1 - - 1.000 - - - - - -
55. fn3krp ENSDARG00000098208 4 1 - - 1.000 - - - - - - fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
56. CU302326.3 CU302326.3 6 1 - - - - - - 1.000 - -
57. si:dkeyp-117h8.10 si:dkeyp-117h8.10 16 1 - - 1.000 - - - - - -
58. SOX8 SOX8 22 1 - - - - - - 1.000 - -
59. MYO7B MYO7B 8 1 - - - - - - 1.000 - -
60. SNORA65 SNORA65 1 1 - - 1.000 - - - - - -
61. NUGGC NUGGC 9 1 - - - - - - 1.000 - -
62. si:dkey-115f9.2 si:dkey-115f9.2 18 1 - - - - - - 1.000 - -
63. STRC ENSDARG00000105391 10 1 - - 1.000 - - - - - - stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
64. CR855307.2 CR855307.2 1 1 - - 1.000 - - - - - -
65. si:dkeyp-11g8.3 si:dkeyp-11g8.3 20 1 - - 1.000 - - - - - -
66. CR376787.1 CR376787.1 10 1 - - - - - - 1.000 - -
67. adcy1a ENSDARG00000069026 1 1 - - - - - - 1.000 - - adenylate cyclase 1a [Source:ZFIN;Acc:ZDB-GENE-070705-302]
68. dock11 ENSDARG00000062485 17 1 - - - - - - 1.000 - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
69. si:ch211-196h16.4 ENSDARG00000094782 0 1 - - 1.000 - - - - - - si:ch211-196h16.4 [Source:ZFIN;Acc:ZDB-GENE-081029-1]
70. ralgps1 ENSDARG00000068370 39 1 - - 1.000 - - - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
71. c1qtnf5 ENSDARG00000056134 729 1 - - - - - - 1.000 - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
72. si:dkey-14i17.1 si:dkey-14i17.1 1 1 - - 1.000 - - - - - -
73. alkbh7 ENSDARG00000037906 9 1 - - - - - - 1.000 - - alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
74. nfixb ENSDARG00000061836 7 1 - - - - - - 1.000 - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
75. zgc:175248 ENSDARG00000104153 1 1 - - - - - - 1.000 - - zgc:175248 [Source:ZFIN;Acc:ZDB-GENE-080204-93]
76. CABZ01055343.1 CABZ01055343.1 12 1 - - - - - - 1.000 - -
77. cyp7a1a cyp7a1a 1 1 - - - - - - 1.000 - -
78. si:ch211-287c22.3 si:ch211-287c22.3 1 1 - - - - - - 1.000 - -
79. 5_8S_rRNA 5_8S_rRNA 24 1 - - - - - - 1.000 - -
80. dnah7 ENSDARG00000060165 21 1 - - - - - - 1.000 - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
81. HTRA2_2 HTRA2_2 1 1 - - - - - - 1.000 - -
82. F2RL3 ENSDARG00000079399 29 1 - - - - - - 1.000 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
83. si:dkeyp-34c12.1 ENSDARG00000071083, ENSDARG00000113229 6 1 - - 1.000 - - - - - - si:dkeyp-34c12.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5347]
84. pcdh2g12 5 1 - - 1.000 - - - - - - protocadherin 2 gamma 12
85. fam207a ENSDARG00000071500 106 1 - - - - - - 1.000 - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
86. KCNJ3_1 KCNJ3_1 30 1 - - 1.000 - - - - - -
87. clrn1 ENSDARG00000102890 5 1 - - - - - - 1.000 - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
88. si:dkey-191j3.2 ENSDARG00000101997 1 1 - - 1.000 - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
89. mir124-1 10 1 - - 1.000 - - - - - - microRNA 124-1
90. p2rx4b ENSDARG00000042452 14 1 - - - - - - 1.000 - - purinergic receptor P2X, ligand-gated ion channel, 4b [Source:ZFIN;Acc:ZDB-GENE-030319-4]
91. si:dkey-25o1.4 si:dkey-25o1.4 1 1 - - - - - - 1.000 - -
92. si:ch211-178j18.2 si:ch211-178j18.2 1 1 - - 1.000 - - - - - -
93. SNTB2 ENSDARG00000051763 2 1 - - - - - - 1.000 - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
94. CR942805.3 CR942805.3 7 1 - - - - - - 1.000 - -
95. mgat3 mgat3 195 1 - - - - - - 1.000 - -
96. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 - - 1.000 - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
97. si:dkey-165g20.2 si:dkey-165g20.2 3 1 - - 1.000 - - - - - -
98. rx3 ENSDARG00000052893 43 1 - - - - - - 1.000 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
99. CR855327.1 CR855327.1 6 1 - - - - - - 1.000 - -
100. si:ch211-203b20.4 ENSDARG00000091790 3 1 - - - - - - 1.000 - - si:ch211-203b20.4 [Source:ZFIN;Acc:ZDB-GENE-060503-208]

There are 540 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA