Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nkd3_1

Gene Name Gene ID Reads Annotation
nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]










Genes with expression patterns similar to nkd3_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 2 - - 1.000 - - - 1.000 - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
2. si:dkey-16j24.1 2 2 - - 1.000 - - - 1.000 - - si:dkey-16j24.1, transcript variant X1
3. si:ch211-202m22.1 ENSDARG00000094491 24 2 - - 1.000 - - - 1.000 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
4. si:dkey-4p15.5 ENSDARG00000086272 7 2 - - 1.000 - - - 1.000 - - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
5. 5S_rRNA_10 5S_rRNA_10 2 2 - - 1.000 - - - 1.000 - -
6. si:ch211-250m6.8 si:ch211-250m6.8 51 1.893 - - 0.893 - - - 1.000 - -
7. EDN3 14 1.846 - - 0.846 - - - 1.000 - - endothelin 3
8. CR352265.1 ENSDARG00000062758 39 1.707 - - 0.917 - - - 0.790 - -
9. si:dkey-26i24.1 ENSDARG00000102673 4 1 - - 1.000 - - - - - - si:dkey-26i24.1 [Source:ZFIN;Acc:ZDB-GENE-110913-88]
10. CT573322.1 CT573322.1 38 1 - - - - - - 1.000 - -
11. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - 1.000 - -
12. CU570791.1 ENSDARG00000098597 4 1 - - - - - - 1.000 - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
13. si:dkeyp-75b4.10 ENSDARG00000079043 7 1 - - - - - - 1.000 - - si:dkeyp-75b4.10 [Source:ZFIN;Acc:ZDB-GENE-090313-394]
14. fam213ab 1 1 - - - - - - 1.000 - - family with sequence similarity 213, member Ab
15. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - 1.000 - - - - - -
16. clrn1 ENSDARG00000102890 5 1 - - - - - - 1.000 - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
17. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - - - - 1.000 - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
18. si:dkey-165g20.2 si:dkey-165g20.2 3 1 - - 1.000 - - - - - -
19. ZNF648 ENSDARG00000104823 194 1 - - - - - - 1.000 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
20. cx28.9 ENSDARG00000041797 12 1 - - - - - - 1.000 - - connexin 28.9 [Source:ZFIN;Acc:ZDB-GENE-041114-200]
21. TRIM35_6 TRIM35_6 1 1 - - - - - - 1.000 - -
22. gata2b ENSDARG00000009094 16 1 - - 1.000 - - - - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
23. cpn1_1 ENSDARG00000005185, ENSDARG00000096728 2 1 - - - - - - 1.000 - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
24. fn3krp ENSDARG00000098208 4 1 - - 1.000 - - - - - - fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
25. CR626874.1 ENSDARG00000100141 55 1 - - - - - - 1.000 - -
26. nfixb ENSDARG00000061836 7 1 - - - - - - 1.000 - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
27. mir30b 4 1 - - - - - - 1.000 - - microRNA 30b
28. GBE1_1 GBE1_1 1 1 - - - - - - 1.000 - -
29. epha6 ENSDARG00000022971 52 1 - - - - - - 1.000 - - eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
30. CU468041.1 ENSDARG00000092125 1 1 - - 1.000 - - - - - -
31. si:dkey-148a12.2 si:dkey-148a12.2 1 1 - - 1.000 - - - - - -
32. hbaa2 ENSDARG00000069735 10 1 - - 1.000 - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
33. si:dkey-211e20.3 si:dkey-211e20.3 1 1 - - 1.000 - - - - - -
34. si:ch211-67e16.10 si:ch211-67e16.10 2 1 - - - - - - 1.000 - -
35. hsf5 ENSDARG00000104686 9 1 - - 1.000 - - - - - - heat shock transcription factor family member 5 [Source:ZFIN;Acc:ZDB-GENE-070410-42]
36. CABZ01087111.1 CABZ01087111.1 42 1 - - 1.000 - - - - - -
37. si:dkey-211g8.6 ENSDARG00000063088 19 1 - - - - - - 1.000 - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
38. CU138503.2 CU138503.2 0 1 - - 1.000 - - - - - -
39. il10 ENSDARG00000078147 3 1 - - - - - - 1.000 - - interleukin 10 [Source:ZFIN;Acc:ZDB-GENE-051111-1]
40. CU302326.3 CU302326.3 6 1 - - - - - - 1.000 - -
41. GBF1 ENSDARG00000027016 30 1 - - - - - - 1.000 - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
42. zgc:174311 zgc:174311 3 1 - - 1.000 - - - - - -
43. si:ch211-160d14.9 8 1 - - - - - - 1.000 - - si:ch211-160d14.9, transcript variant X1
44. BX530067.1 BX530067.1 20 1 - - - - - - 1.000 - -
45. gucy2f ENSDARG00000025504 6 1 - - - - - - 1.000 - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
46. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - - - - - 1.000 - -
47. BX321875.3 ENSDARG00000112569 24 1 - - - - - - 1.000 - -
48. gpr158 gpr158 52 1 - - - - - - 1.000 - -
49. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - 1.000 - -
50. CABZ01079302.1 ENSDARG00000103230 2 1 - - 1.000 - - - - - -
51. si:dkey-216e24.5 si:dkey-216e24.5 1 1 - - - - - - 1.000 - -
52. SNORA53 SNORA53 10 1 - - 1.000 - - - - - -
53. zgc:114037_5 6 1 - - 1.000 - - - - - - zgc:114037
54. DNM2 DNM2 2 1 - - - - - - 1.000 - -
55. BX324198.1 BX324198.1 12 1 - - - - - - 1.000 - -
56. kcnq3 ENSDARG00000060085 0 1 - - 1.000 - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
57. CLCN2 CLCN2 8 1 - - - - - - 1.000 - -
58. SNORD52 SNORD52 23 1 - - - - - - 1.000 - -
59. slc2a9l1 ENSDARG00000070672 1 1 - - - - - - 1.000 - - solute carrier family 2 (facilitated glucose transporter), member 9-like 1 [Source:ZFIN;Acc:ZDB-GENE-090915-3]
60. im:7138239 ENSDARG00000039070 3 1 - - - - - - 1.000 - - im:7138239 [Source:ZFIN;Acc:ZDB-GENE-081007-2]
61. CR855307.2 CR855307.2 1 1 - - 1.000 - - - - - -
62. BX649490.1 ENSDARG00000091718 7 1 - - - - - - 1.000 - - titin-like [Source:NCBI gene;Acc:101883412]
63. KCNJ3_1 KCNJ3_1 30 1 - - 1.000 - - - - - -
64. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - 1.000 - - - - - -
65. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - - - 1.000 - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
66. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - - 1.000 - -
67. si:dkey-242h9.4 4 1 - - - - - - 1.000 - - si:dkey-242h9.4
68. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - 1.000 - - - - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
69. cd74a ENSDARG00000009087 20 1 - - - - - - 1.000 - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
70. rx3 ENSDARG00000052893 43 1 - - - - - - 1.000 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
71. CR356247.1 CR356247.1 2 1 - - 1.000 - - - - - -
72. oxtrl ENSDARG00000044175 10 1 - - - - - - 1.000 - - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
73. si:dkey-191j3.2 ENSDARG00000101997 1 1 - - 1.000 - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
74. si:ch211-274f20.4 si:ch211-274f20.4 0 1 - - 1.000 - - - - - -
75. Metazoa_SRP_21 Metazoa_SRP_21 1 1 - - - - - - 1.000 - -
76. VSIG10L ENSDARG00000089237 12 1 - - - - - - 1.000 - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
77. ralgps1 ENSDARG00000068370 39 1 - - 1.000 - - - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
78. zgc:162322 zgc:162322 1 1 - - 1.000 - - - - - -
79. SNORD10 SNORD10 71 1 - - - - - - 1.000 - -
80. ppm1na ENSDARG00000010231 3 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
81. si:ch211-244b2.3 ENSDARG00000069244 19 1 - - - - - - 1.000 - - si:ch211-244b2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4737]
82. CABZ01028403.1 CABZ01028403.1 48 1 - - - - - - 1.000 - -
83. CT025934.2 CT025934.2 22 1 - - - - - - 1.000 - -
84. C12H17orf70 C12H17orf70 25 1 - - - - - - 1.000 - -
85. si:ch211-175f12.2 ENSDARG00000095831 1 1 - - - - - - 1.000 - - si:ch211-175f12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-220]
86. lrp6 ENSDARG00000100143 1 1 - - - - - - 1.000 - - low density lipoprotein receptor-related protein 6 [Source:ZFIN;Acc:ZDB-GENE-090821-1]
87. si:ch211-196h16.4 ENSDARG00000094782 0 1 - - 1.000 - - - - - - si:ch211-196h16.4 [Source:ZFIN;Acc:ZDB-GENE-081029-1]
88. CABZ01012080.1 CABZ01012080.1 10 1 - - 1.000 - - - - - -
89. si:ch211-215m21.27 si:ch211-215m21.27 3 1 - - 1.000 - - - - - -
90. sumo2a ENSDARG00000104390 4 1 - - - - - - 1.000 - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
91. pcdh2g12 5 1 - - 1.000 - - - - - - protocadherin 2 gamma 12
92. CR536621.1 CR536621.1 2 1 - - 1.000 - - - - - -
93. CR626884.3 ENSDARG00000104648 1 1 - - 1.000 - - - - - -
94. CR855327.1 CR855327.1 6 1 - - - - - - 1.000 - -
95. SNTB2 ENSDARG00000051763 2 1 - - - - - - 1.000 - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
96. ggh ENSDARG00000037176 9 1 - - - - - - 1.000 - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
97. mxd ENSDARG00000023369 8 1 - - 1.000 - - - - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
98. si:dkey-179j5.5 ENSDARG00000074538, ENSDARG00000116016, ENSDARG00000116908 1 1 - - - - - - 1.000 - - si:dkey-179j5.5 [Source:ZFIN;Acc:ZDB-GENE-070705-320]
99. CR942805.3 CR942805.3 7 1 - - - - - - 1.000 - -
100. zgc:173593 ENSDARG00000077360 10 1 - - - - - - 1.000 - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]

There are 540 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA