Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nkd3

Gene Name Gene ID Reads Annotation
nkd3 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 2 naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]










Genes with expression patterns similar to nkd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkd3 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 2 3 - 1.000 1.000 - - - - 1.000 - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
2. mtus2 mtus2 22 1.81 - 0.884 0.926 - - - - - -
3. CCDC66 2 1.785 - 0.884 - - - - - 0.901 - coiled-coil domain containing 66
4. ankdd1a ENSDARG00000098647 8 1.706 - - 0.706 - - - - 1.000 - ankyrin repeat and death domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-070615-8]
5. ctslb ENSDARG00000039173, ENSDARG00000074306 27150 1.666 - 0.884 - - - - - 0.782 - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
6. elavl4 ENSDARG00000045639 998 1.665 - 0.894 0.771 - - - - - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
7. BX936443.2 BX936443.2 28 1.53 - 0.766 0.764 - - - - - -
8. si:ch211-253d24.2 si:ch211-253d24.2 12 1.466 - - 0.764 - - - - 0.702 -
9. si:ch73-103l1.2 ENSDARG00000096505 17 1 - - - - - - - 1.000 - si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226]
10. rpap2 ENSDARG00000038397 118 1 - 1.000 - - - - - - - RNA polymerase II associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-420]
11. zgc:173714 ENSDARG00000103495 0 1 - - - - - - - 1.000 - zgc:173714 [Source:ZFIN;Acc:ZDB-GENE-071004-90]
12. adck3 83 1 - 1.000 - - - - - - - aarF domain containing kinase 3
13. si:ch211-167b20.7 si:ch211-167b20.7 3 1 - - 1.000 - - - - - -
14. si:dkey-199m13.3 si:dkey-199m13.3 2 1 - - - - - - - 1.000 -
15. BX248128.5 BX248128.5 0 1 - - - - - - - 1.000 -
16. ZNF70_1 ZNF70_1 3 1 - - - - - - - 1.000 -
17. wisp3 ENSDARG00000071048 15 1 - - - - - - - 1.000 - WNT1 inducible signaling pathway protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-86]
18. itga6l ENSDARG00000056018 1 1 - - - - - - - 1.000 - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
19. si:ch211-229l10.10 si:ch211-229l10.10 8 1 - - - - - - - 1.000 -
20. ugt5b3 ENSDARG00000099276 2 1 - - - - - - - 1.000 - UDP glucuronosyltransferase 5 family, polypeptide B3 [Source:ZFIN;Acc:ZDB-GENE-100406-5]
21. CU694374.2 CU694374.2 5 1 - - - - - - - 1.000 -
22. CR450793.1 ENSDARG00000088927 6 1 - - - - - - - 1.000 - zinc finger protein 436-like [Source:NCBI gene;Acc:103911751]
23. afap1l1a ENSDARG00000089162, ENSDARG00000116849, ENSDARG00000117182 4 1 - - - - - - - 1.000 - actin filament associated protein 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-050913-76]
24. si:dkey-240n22.6 ENSDARG00000089296, ENSDARG00000106998 3 1 - - - - - - - 1.000 - si:dkey-240n22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-411]
25. si:ch211-267j24.2 si:ch211-267j24.2 7 1 - - - - - - - 1.000 -
26. si:ch73-138e16.2 ENSDARG00000104894 1 1 - - - - - - - 1.000 - si:ch73-138e16.2 [Source:ZFIN;Acc:ZDB-GENE-070705-201]
27. rftn1a ENSDARG00000070831 5 1 - - - - - - - 1.000 - raftlin, lipid raft linker 1a [Source:ZFIN;Acc:ZDB-GENE-060503-293]
28. CYP46A1 CYP46A1 16 1 - - - - - - - 1.000 -
29. CT573234.2 CT573234.2 1 1 - - - - - - - 1.000 -
30. si:rp71-29l5.1 si:rp71-29l5.1 0 1 - - - - - - - 1.000 -
31. HIST1H2BA ENSDARG00000116654 10 1 - - - - - - - 1.000 - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
32. si:dkey-27h10.2 ENSDARG00000094485 3 1 - - - - - - - 1.000 - si:dkey-27h10.2 [Source:ZFIN;Acc:ZDB-GENE-090313-296]
33. cdhr1a ENSDARG00000004643 7 1 - - - - - - - 1.000 - cadherin-related family member 1a [Source:ZFIN;Acc:ZDB-GENE-040924-4]
34. C20H1orf95 C20H1orf95 12 1 - - 1.000 - - - - - -
35. ptk2.2 ptk2.2 3 1 - - 1.000 - - - - - -
36. si:ch73-79g6.3 si:ch73-79g6.3 1 1 - - - - - - - 1.000 -
37. si:dkeyp-117b11.3 ENSDARG00000095437 3 1 - - - - - - - 1.000 - si:dkeyp-117b11.3 [Source:ZFIN;Acc:ZDB-GENE-081104-455]
38. trim35-3 ENSDARG00000052255 1 1 - - - - - - - 1.000 - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
39. si:ch73-132k15.2 ENSDARG00000095867 5 1 - - - - - - - 1.000 - si:ch73-132k15.2 [Source:ZFIN;Acc:ZDB-GENE-110411-191]
40. zgc:73349 zgc:73349 4 1 - - - - - - - 1.000 -
41. si:ch1073-47b13.2 si:ch1073-47b13.2 3 1 - - - - - - - 1.000 -
42. si:dkey-30j19.3 si:dkey-30j19.3 3 1 - - - - - - - 1.000 -
43. BX323448.1 ENSDARG00000116236 10 1 - - - - - - - 1.000 -
44. si:ch73-27e22.1 ENSDARG00000111423 2 1 - - 1.000 - - - - - - si:ch73-27e22.1 [Source:ZFIN;Acc:ZDB-GENE-081031-107]
45. cx36.7 ENSDARG00000017927 1 1 - - - - - - - 1.000 - connexin 36.7 [Source:ZFIN;Acc:ZDB-GENE-050616-5]
46. si:ch211-223a21.3 ENSDARG00000104737 28 1 - - - - - - - 1.000 - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
47. asic1c ENSDARG00000098428 5 1 - - - - - - - 1.000 - acid-sensing (proton-gated) ion channel 1c [Source:ZFIN;Acc:ZDB-GENE-040513-3]
48. or137-3 ENSDARG00000070344 1 1 - - - - - - - 1.000 - odorant receptor, family H, subfamily 137, member 3 [Source:ZFIN;Acc:ZDB-GENE-070806-24]
49. TRIM14_13 TRIM14_13 18 1 - - - - - - - 1.000 -
50. ftr16 ENSDARG00000032043 0 1 - - - - - - - 1.000 - finTRIM family, member 16 [Source:ZFIN;Acc:ZDB-GENE-070912-126]
51. TNFRSF14_6 TNFRSF14_6 3 1 - - 1.000 - - - - - -
52. CR392330.1 ENSDARG00000086419 20 1 - - - - - - - 1.000 - si:ch211-282j17.13 [Source:NCBI gene;Acc:794438]
53. BX284672.1 BX284672.1 11 1 - - - - - - - 1.000 -
54. CU469509.3 CU469509.3 1 1 - - - - - - - 1.000 -
55. LRRTM4 2 1 - - - - - - - 1.000 - leucine rich repeat transmembrane neuronal 4
56. CR847893.1 CR847893.1 6 1 - - - - - - - 1.000 -
57. lonrf1 ENSDARG00000075048 13 1 - - - - - - - 1.000 - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
58. ncanb ENSDARG00000005783 22 0.992 - - 0.992 - - - - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
59. mafb ENSDARG00000076520 139 0.99 - 0.990 - - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog b (paralog b) [Source:ZFIN;Acc:ZDB-GENE-141211-38]
60. SPOP ENSDARG00000100519 52 0.983 - - 0.983 - - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
61. GPR153 ENSDARG00000087601 48 0.975 - - 0.975 - - - - - - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
62. VSIG10L ENSDARG00000089237 12 0.956 - - 0.956 - - - - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
63. CYTH4 CYTH4 2 0.956 - - 0.956 - - - - - -
64. si:ch211-93e11.8 ENSDARG00000075022 5 0.95 - - - - - - - 0.950 - si:ch211-93e11.8 [Source:ZFIN;Acc:ZDB-GENE-121214-283]
65. otomp ENSDARG00000040306 682 0.945 - - 0.945 - - - - - - otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1]
66. neu3.2 ENSDARG00000010047, ENSDARG00000117176 68 0.943 - 0.943 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-262]
67. espnla ENSDARG00000078211 8 0.943 - - 0.943 - - - - - - espin like a [Source:ZFIN;Acc:ZDB-GENE-131121-3]
68. xkr6 xkr6 286 0.942 - 0.942 - - - - - - -
69. si:ch211-93g21.2 ENSDARG00000092842 56 0.942 - 0.942 - - - - - - - si:ch211-93g21.2 [Source:ZFIN;Acc:ZDB-GENE-060503-799]
70. PFKFB2 PFKFB2 105 0.942 - 0.942 - - - - - - -
71. si:dkey-199m13.7 ENSDARG00000099837, ENSDARG00000111824 22 0.942 - 0.942 - - - - - - - si:dkey-199m13.7 [Source:ZFIN;Acc:ZDB-GENE-110914-26]
72. isl2b ENSDARG00000053499 132 0.942 - 0.942 - - - - - - - ISL LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-990415-133]
73. C1S_1 C1S_1 11 0.942 - 0.942 - - - - - - -
74. morn2 ENSDARG00000071360 44 0.942 - 0.942 - - - - - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
75. TKT TKT 298 0.942 - 0.942 - - - - - - -
76. TRIM14_9 TRIM14_9 5 0.942 - 0.942 - - - - - - -
77. si:ch211-222k6.1 20 0.942 - 0.942 - - - - - - - si:ch211-222k6.1, transcript variant X6
78. slc6a6b ENSDARG00000098438 7 0.942 - 0.942 - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
79. mb21d2b mb21d2b 84 0.942 - 0.942 - - - - - - -
80. nr4a2a ENSDARG00000017007 140 0.942 - 0.942 - - - - - - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
81. skor1b ENSDARG00000062448, ENSDARG00000112341 282 0.942 - 0.942 - - - - - - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
82. lepb ENSDARG00000045548 1 0.942 - 0.942 - - - - - - - leptin b [Source:ZFIN;Acc:ZDB-GENE-041210-183]
83. MAP6D1 ENSDARG00000079777 47 0.942 - 0.942 - - - - - - - MAP6 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-293]
84. si:dkey-203c4.2 si:dkey-203c4.2 4 0.942 - 0.942 - - - - - - -
85. AL954698.2 ENSDARG00000102132 28 0.942 - 0.942 - - - - - - -
86. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 0.942 - 0.942 - - - - - - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
87. SEZ6 SEZ6 262 0.942 - 0.942 - - - - - - -
88. AK9 ENSDARG00000021913 53 0.942 - 0.942 - - - - - - - adenylate kinase 9 [Source:ZFIN;Acc:ZDB-GENE-041014-337]
89. CABZ01067609.1 CABZ01067609.1 111 0.942 - 0.942 - - - - - - -
90. sox14 ENSDARG00000070929 352 0.942 - 0.942 - - - - - - - SRY (sex determining region Y)-box 14 [Source:ZFIN;Acc:ZDB-GENE-051113-268]
91. C22H19orf26 C22H19orf26 66 0.938 - - 0.938 - - - - - -
92. mapk15 ENSDARG00000100822 157 0.927 - 0.927 - - - - - - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
93. si:dkey-58f10.13 ENSDARG00000095532 11 0.919 - - - - - - - 0.919 - si:dkey-58f10.13 [Source:ZFIN;Acc:ZDB-GENE-060526-315]
94. si:ch211-80h18.1 ENSDARG00000078522 1941 0.918 - - 0.918 - - - - - - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
95. s100a1 ENSDARG00000015543 274 0.915 - 0.915 - - - - - - - S100 calcium binding protein A1 [Source:ZFIN;Acc:ZDB-GENE-040916-1]
96. CR382327.1 ENSDARG00000088739 56 0.914 - - 0.914 - - - - - -
97. si:dkey-72l14.3 ENSDARG00000061044 59 0.911 - - - - - - - 0.911 - si:dkey-72l14.3 [Source:ZFIN;Acc:ZDB-GENE-060526-332]
98. FMNL1 FMNL1 7 0.908 - - - - - - - 0.908 -
99. ENSDARG00000091766 ENSDARG00000091766 15 0.903 - - 0.903 - - - - - -
100. CABZ01066717.2 CABZ01066717.2 10 0.902 - - 0.902 - - - - - -

There are 559 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA