Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nkd1

Gene Name Gene ID Reads Annotation
nkd1 ENSDARG00000020053 4450 naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]










Genes with expression patterns similar to nkd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkd1 ENSDARG00000020053 4450 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]
2. MAPRE2 ENSDARG00000099943 3041 3.042 - 0.726 - - 0.853 - - 0.702 0.761 microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
3. ACVR2B 6615 2.674 - 0.804 - - 0.871 - 0.999 - - activin A receptor, type IIB
4. Mar-07 Mar-07 2926 2.599 - 0.854 - - - 0.982 - 0.763 -
5. ndufa5 ENSDARG00000039346 2617 2.558 - 0.844 0.972 - - - - 0.742 - NADH:ubiquinone oxidoreductase subunit A5 [Source:ZFIN;Acc:ZDB-GENE-050320-17]
6. axin2 ENSDARG00000100149 4223 2.478 - 0.708 - - - 0.987 - 0.783 - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
7. ppm1la ENSDARG00000063218 2142 2.381 - 0.729 - - 0.857 - - 0.795 - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
8. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 2.314 - 0.813 - - 0.747 - - 0.754 - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
9. C18H12orf23 C18H12orf23 5362 1.985 - - - - - 0.986 0.999 - -
10. her6 ENSDARG00000006514, ENSDARG00000111099 7477 1.972 - - - - - 0.973 0.999 - - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
11. MAF1 ENSDARG00000013122 6899 1.971 - - - - - 0.972 0.999 - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
12. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.944 - - - - 0.946 - 0.998 - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
13. znf740 znf740 2458 1.846 - - - - - - 0.999 0.847 -
14. mier1a ENSDARG00000041072 1690 1.834 - - - - - 0.985 - 0.849 - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
15. rnf13 ENSDARG00000019438 1560 1.824 - - - - - 0.983 - 0.841 - ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]
16. arl4d ENSDARG00000045074, ENSDARG00000114046 2237 1.823 - - - - 0.844 0.979 - - - ADP-ribosylation factor-like 4D [Source:ZFIN;Acc:ZDB-GENE-030131-2293]
17. zgc:158387 zgc:158387 9147 1.805 - - - - - 0.811 0.994 - -
18. hoxb3a ENSDARG00000029263 5493 1.802 - - - - 0.853 0.949 - - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
19. si:dkeyp-110e4.6 ENSDARG00000061845 1755 1.8 - - - - - 0.981 - 0.819 - si:dkeyp-110e4.6 [Source:ZFIN;Acc:ZDB-GENE-030219-75]
20. dtna ENSDARG00000031015 1746 1.779 - 0.780 - - - - 0.999 - - dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
21. ITCH ITCH 1226 1.778 - 0.789 - - - 0.989 - - -
22. prrc2c ENSDARG00000057583, ENSDARG00000116399 1673 1.766 - 0.767 - - - - 0.999 - - proline-rich coiled-coil 2C [Source:ZFIN;Acc:ZDB-GENE-081104-156]
23. HECW1 HECW1 1531 1.766 - - - - - - 0.999 0.767 -
24. C13H9orf72 C13H9orf72 2310 1.761 - 0.774 - - - 0.987 - - -
25. plcg1 ENSDARG00000038442 5324 1.76 - - - - 0.952 - - 0.808 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
26. arf6a ENSDARG00000101626 2959 1.755 - - - - - - 0.995 0.760 - ADP-ribosylation factor 6a [Source:ZFIN;Acc:ZDB-GENE-030131-8007]
27. dnajc15 ENSDARG00000038309 1274 1.748 - 0.764 - - - 0.984 - - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
28. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 1.748 - - - - - 0.982 - 0.766 - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
29. kdm1a ENSDARG00000060679 6152 1.746 - - - - - 0.989 - 0.757 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
30. NRD1 NRD1 3486 1.734 - - - - 0.869 - - 0.865 -
31. SERP1_1 ENSDARG00000076223 6668 1.733 - - - - 0.803 0.930 - - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
32. her13 ENSDARG00000007097 2000 1.73 - 0.746 - - - 0.984 - - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
33. slc38a4 ENSDARG00000018149 2344 1.722 - - - - - - 0.999 0.723 - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]
34. nr2f6b ENSDARG00000003165 5855 1.714 - 0.772 - - 0.942 - - - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
35. znf280d ENSDARG00000077013 1387 1.711 - - - - - 0.991 - 0.720 - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
36. cbx3a ENSDARG00000003860 4922 1.709 - 0.727 - - - 0.982 - - - chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
37. ppm1g ENSDARG00000075559 6516 1.704 - 0.760 - - 0.944 - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
38. dlb ENSDARG00000004232 5120 1.702 - - - - - - 0.998 0.704 - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
39. tmem30aa ENSDARG00000030236 2842 1.702 - - - - 0.963 - - 0.739 - transmembrane protein 30Aa [Source:ZFIN;Acc:ZDB-GENE-040704-26]
40. wu:fq41a10 wu:fq41a10 7009 1.701 - 0.750 - - - 0.951 - - -
41. si:ch73-46j18.5 ENSDARG00000092467 6002 1.7 - 0.752 - - 0.948 - - - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
42. pik3r1 ENSDARG00000038524 3615 1.699 - - - - 0.855 - - 0.844 - phosphoinositide-3-kinase, regulatory subunit 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-1280]
43. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.694 - 0.706 - - - 0.988 - - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
44. prtgb ENSDARG00000040442 12365 1.694 - 0.714 - - - - 0.980 - - protogenin homolog b (Gallus gallus) [Source:ZFIN;Acc:ZDB-GENE-060302-1]
45. MAP1S_1 MAP1S_1 1117 1.687 - - - - - 0.981 - 0.706 -
46. eif2s3 ENSDARG00000008292 17051 1.683 - 0.783 - - - 0.900 - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
47. ptenb ENSDARG00000056623 5783 1.683 - - - - 0.943 - - 0.740 - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
48. Mar-06 Mar-06 953 1.68 - 0.880 - - - - - 0.800 -
49. e2f7 ENSDARG00000008986 1439 1.672 - - - - 0.858 - - 0.814 - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
50. pdcd11 ENSDARG00000052480 2791 1.668 - 0.824 - - 0.844 - - - - programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
51. calm1b ENSDARG00000034187 13158 1.659 - - - - 0.714 - 0.945 - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
52. srsf2a ENSDARG00000057484 25721 1.657 - - - - 0.747 0.910 - - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
53. pelo ENSDARG00000055477 1927 1.653 - 0.833 - - - - - 0.820 - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
54. mob4 ENSDARG00000056085 17978 1.653 - - - - 0.700 0.953 - - - MOB family member 4, phocein [Source:ZFIN;Acc:ZDB-GENE-040801-174]
55. plecb ENSDARG00000021987 13621 1.649 - 0.807 - - - 0.842 - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
56. meis1 meis1 6937 1.646 - 0.717 - - - 0.929 - - -
57. pdia4 ENSDARG00000018491 1914 1.638 - - - - 0.855 - - - 0.783 protein disulfide isomerase family A, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5493]
58. net1 ENSDARG00000032765 6738 1.634 - - - - 0.794 0.840 - - - neuroepithelial cell transforming 1 [Source:ZFIN;Acc:ZDB-GENE-041121-18]
59. CCDC106 CCDC106 1908 1.631 - - - - 0.861 - - 0.770 -
60. desi2 ENSDARG00000004460 1593 1.623 - 0.764 - - 0.859 - - - - desumoylating isopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-39]
61. KLHL13 ENSDARG00000086463, ENSDARG00000103786, ENSDARG00000115063 914 1.613 - 0.825 - - - - - 0.788 - kelch-like family member 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2671]
62. prkcbp1l ENSDARG00000011932 2714 1.604 - 0.811 - - - - - - 0.793 protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
63. asap1a ENSDARG00000029463 1566 1.595 - 0.742 - - - - - 0.853 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
64. prmt1 ENSDARG00000010246 11311 1.594 - 0.851 - - - - - 0.743 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
65. luc7l3 ENSDARG00000014366 4416 1.592 - 0.756 - - 0.836 - - - - LUC7-like 3 pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-060616-375]
66. WIZ WIZ 1188 1.581 - 0.721 - - - - - 0.860 -
67. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.568 - 0.791 - - 0.777 - - - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
68. ATXN7 ENSDARG00000074804 1137 1.567 - - - - 0.765 - - 0.802 - ataxin 7 [Source:ZFIN;Acc:ZDB-GENE-110621-1]
69. CR388231.3 ENSDARG00000105601 2404 1.565 - 0.751 - - - - - 0.814 -
70. utp3 ENSDARG00000056720 922 1.564 - 0.753 - - - - - 0.811 - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
71. plxnb1b ENSDARG00000017211 4676 1.563 - 0.711 - - - - - 0.852 - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
72. bysl ENSDARG00000001057 2621 1.563 - - - - 0.846 - - 0.717 - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
73. pygma ENSDARG00000055518 15972 1.557 - 0.730 - - - 0.827 - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
74. DTX2 ENSDARG00000032933, ENSDARG00000109243 909 1.554 - 0.753 - - - - - 0.801 - deltex 2, E3 ubiquitin ligase [Source:ZFIN;Acc:ZDB-GENE-081022-150]
75. knop1 ENSDARG00000077721 2198 1.549 - 0.764 - - - - - 0.785 - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
76. tead1a ENSDARG00000028159 3574 1.548 - 0.708 - - 0.840 - - - - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
77. TMEM150A TMEM150A 975 1.536 - 0.782 - - - - - 0.754 -
78. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 1.522 - 0.791 - - - - 0.731 - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
79. actr1 ENSDARG00000011611 3879 1.521 - 0.751 - - - - - 0.770 - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
80. cx43.4 ENSDARG00000007099 16369 1.52 - 0.783 - - 0.737 - - - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
81. tlk1a ENSDARG00000042467 2339 1.497 - 0.768 - - - - - 0.729 - tousled-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-071008-2]
82. pgk1 ENSDARG00000054191 7652 1.495 - 0.778 - - - 0.717 - - - phosphoglycerate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2711]
83. ssbp1 ENSDARG00000039350 809 1.495 - 0.711 - - - - - 0.784 - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
84. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 1.488 - 0.741 - - - - - 0.747 - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
85. lrpprc ENSDARG00000043970 3847 1.486 - 0.708 - - - - - 0.778 - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
86. srrm1 ENSDARG00000001244 4972 1.485 - 0.726 - - 0.759 - - - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
87. trrap ENSDARG00000100623 3429 1.484 0.715 - - - - - - 0.769 - transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
88. pptc7b ENSDARG00000052658 1756 1.483 - 0.783 - - - - - 0.700 - PTC7 protein phosphatase homolog b [Source:ZFIN;Acc:ZDB-GENE-081105-111]
89. WU:FC32F04 WU:FC32F04 2525 1.48 - 0.757 - - - - - - 0.723
90. polr2k ENSDARG00000075616 2047 1.475 - 0.735 - - - - - 0.740 - polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
91. ddx19 ENSDARG00000005699 4602 1.462 - - - - 0.750 - - 0.712 - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
92. MRPL52 ENSDARG00000090568 4402 1.46 - 0.723 - - - - - 0.737 - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
93. taf7 ENSDARG00000019572 1305 1.458 - 0.704 - - - - - 0.754 - TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-020419-18]
94. mdm4 ENSDARG00000057513 1954 1.454 - - - - - - - 0.744 0.710 MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
95. gstm gstm 4064 1.453 - 0.715 - - - - - 0.738 -
96. pogzb ENSDARG00000076542, ENSDARG00000113904 787 1.447 - 0.708 - - - - - 0.739 - pogo transposable element derived with ZNF domain b [Source:ZFIN;Acc:ZDB-GENE-100609-3]
97. rassf8b ENSDARG00000045485 1568 1.432 - 0.721 - - - - - 0.711 - Ras association (RalGDS/AF-6) domain family (N-terminal) member 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1338]
98. mapk14b ENSDARG00000028721 1486 1 - - - - - - 1.000 - - mitogen-activated protein kinase 14b [Source:ZFIN;Acc:ZDB-GENE-021007-1]
99. gid8b ENSDARG00000037589 2121 1 - - - - - - 1.000 - - GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
100. rbm14b ENSDARG00000103834 1597 1 - - - - - - 1.000 - - RNA binding motif protein 14b [Source:ZFIN;Acc:ZDB-GENE-040426-2455]

There are 1448 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA