Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nkain1

Gene Name Gene ID Reads Annotation
nkain1 ENSDARG00000006859 1961 sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]










Genes with expression patterns similar to nkain1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkain1 ENSDARG00000006859 1961 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
2. rtca ENSDARG00000002215 3558 3.725 - - - 0.759 - 0.711 0.701 0.763 0.791 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
3. whsc1l1 8544 3.291 - 0.987 - - - 0.793 0.798 - 0.713 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
4. appb ENSDARG00000055543, ENSDARG00000109552 4461 3.232 0.721 - - - 0.995 0.744 0.772 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
5. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 3.231 - 0.994 0.715 - - - 0.717 - 0.805 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
6. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.208 - - 0.722 - - 0.837 0.836 - 0.813 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
7. msi1 ENSDARG00000010710 2634 3.174 - - 0.722 0.779 - 0.862 0.811 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
8. dpysl5a ENSDARG00000011141 1827 3.165 - - - - - 0.744 0.814 0.816 0.791 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
9. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 3.148 - - - - - 0.887 0.807 0.748 0.706 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
10. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 3.131 - - - - - 0.757 0.848 0.780 0.746 zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
11. arnt2 ENSDARG00000103697 5731 3.107 - - 0.785 - - 0.852 - 0.735 0.735 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
12. mdkb ENSDARG00000020708 5393 3.082 - - - - 0.922 0.713 0.708 0.739 - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
13. tmpob ENSDARG00000022978 8121 3.038 - - 0.714 - - 0.713 0.828 - 0.783 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
14. fzd3a ENSDARG00000021664 1958 3.003 - - 0.745 0.720 - 0.773 0.765 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
15. gfap ENSDARG00000025301 5584 2.654 - 0.999 - - - 0.857 0.798 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
16. dnajc5aa ENSDARG00000042948 2885 2.54 - - - - - 0.875 0.854 - 0.811 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
17. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.522 - - - - 0.874 - 0.823 - 0.825 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
18. pou4f1 ENSDARG00000005559 821 2.499 - - - - 0.995 0.754 0.750 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
19. xylt1 ENSDARG00000061248 2357 2.497 - 0.999 - - - 0.738 0.760 - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
20. sf3a1 ENSDARG00000041887 6702 2.484 - - - - 0.991 - - 0.715 0.778 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
21. apex1 ENSDARG00000045843 6345 2.473 - - - - 0.935 0.717 0.821 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
22. tuba1c ENSDARG00000055216 8384 2.456 - - - - - 0.863 0.795 - 0.798 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
23. RLTPR 1158 2.43 - - - - - 0.801 0.902 - 0.727 RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
24. tmem35 ENSDARG00000052567 5685 2.424 - - - - - 0.797 0.799 - 0.828 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
25. hnrnpub ENSDARG00000004735 16496 2.424 - - - - - 0.764 0.822 - 0.838 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
26. nova1 ENSDARG00000020178 4129 2.422 - - - - - 0.846 0.821 0.755 - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
27. smc1al ENSDARG00000058203 8838 2.416 - - - - 0.921 0.730 - - 0.765 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
28. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.399 - - - - - 0.875 0.754 - 0.770 G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
29. nrarpb ENSDARG00000018958 6225 2.398 - - - - - 0.836 0.799 - 0.763 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
30. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.394 - - 0.700 - - 0.883 0.811 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
31. snrpd3l ENSDARG00000076283 7655 2.394 - - - - - 0.760 0.866 - 0.768 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
32. hmgb3a ENSDARG00000056725 15668 2.393 - - - - - 0.849 0.816 - 0.728 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
33. cadm3 ENSDARG00000057013 1545 2.38 - - - - - 0.862 0.745 - 0.773 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
34. lhx1a ENSDARG00000014018 958 2.38 - - - - - 0.844 0.750 - 0.786 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
35. sema6a ENSDARG00000102165 1401 2.373 - - - - - 0.744 0.906 - 0.723 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
36. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 2.361 - - - - - 0.843 0.785 - 0.733 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
37. gsx1 ENSDARG00000035735 1243 2.358 - - - - - 0.855 0.787 0.716 - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
38. C8H1orf106 C8H1orf106 2690 2.356 - - - - - 0.797 0.754 - 0.805
39. nbeaa ENSDARG00000070080 862 2.348 - - - - - 0.765 0.815 - 0.768 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
40. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.339 - - - - - 0.842 0.787 - 0.710 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
41. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 2.338 - - 0.735 - 0.865 0.738 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
42. vezf1a ENSDARG00000008247 1449 2.338 - - - - - 0.810 0.737 - 0.791 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
43. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.337 - - - - - 0.865 0.763 0.709 - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
44. gap43 ENSDARG00000099744 4114 2.337 - - - - - 0.808 0.787 - 0.742 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
45. TNRC6C_2 TNRC6C_2 2444 2.335 - - 0.705 - - 0.873 0.757 - -
46. pcdh1gc5 ENSDARG00000104826 10052 2.333 - - - - - 0.834 0.782 0.717 - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
47. hmgb1b ENSDARG00000030479 10398 2.33 - - 0.720 - - 0.802 0.808 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
48. nfya ENSDARG00000042004, ENSDARG00000114231 6606 2.328 - - - 0.822 - 0.774 - 0.732 - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
49. si:dkey-28b4.8 ENSDARG00000002840 1277 2.328 - - - - - 0.853 0.757 - 0.718 si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
50. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 2.327 - - - - - 0.798 0.827 - 0.702 zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
51. fyna ENSDARG00000011370 1679 2.327 - - - - - 0.766 0.777 0.784 - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
52. scamp5 scamp5 797 2.318 - - - 0.773 - 0.736 0.809 - -
53. b4galt2 ENSDARG00000077994 480 2.318 - - - - - 0.834 0.752 - 0.732 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-070912-258]
54. coe2 coe2 1633 2.314 - - - - - 0.840 0.765 - 0.709
55. marcksa ENSDARG00000004049 2518 2.312 - - - - - 0.723 0.769 - 0.820 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
56. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 2.31 - - - - 0.847 - 0.737 0.726 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
57. tox ENSDARG00000032317 9126 2.306 - - - - - 0.742 0.795 - 0.769 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
58. smarca5 ENSDARG00000052348 15433 2.299 - - - - 0.719 0.791 - - 0.789 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
59. ndrg4 ENSDARG00000103937 1234 2.291 - - - - - 0.771 0.769 - 0.751 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
60. HNRNPAB HNRNPAB 22267 2.287 - - - - 0.777 - 0.773 - 0.737
61. mllt11 ENSDARG00000071026 2518 2.285 - - - - - 0.852 0.733 0.700 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
62. SPTBN4_1 ENSDARG00000092624 473 2.279 - - - - - 0.773 0.730 0.776 - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
63. rassf2a ENSDARG00000029865, ENSDARG00000113625 1134 2.276 - - - - - 0.742 0.806 - 0.728 Ras association (RalGDS/AF-6) domain family member 2a [Source:ZFIN;Acc:ZDB-GENE-040912-124]
64. scn2b ENSDARG00000101713 796 2.275 - - - - - 0.757 0.800 0.718 - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
65. ctnnd2b ENSDARG00000003779 964 2.271 - - 0.713 - - 0.767 0.791 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
66. CYTH2 ENSDARG00000028800 2349 2.257 - - - - - 0.761 0.763 - 0.733 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
67. rap2ip rap2ip 681 2.254 - - - - - 0.771 0.736 - 0.747
68. amer2 ENSDARG00000075222 594 2.249 - - - - - 0.789 - 0.756 0.704 APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
69. gipc1 ENSDARG00000104483 2913 2.244 - - 0.750 - - 0.768 0.726 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
70. fam60al 2846 2.241 - - - - - 0.711 0.821 - 0.709 family with sequence similarity 60, member A, like
71. ncapd2 ENSDARG00000005058 2819 2.234 - - 0.716 - - - 0.800 - 0.718 non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
72. prmt1 ENSDARG00000010246 11311 2.232 - - 0.736 - - 0.711 - 0.785 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
73. si:ch73-21g5.7 ENSDARG00000093156 9412 2.232 - - - - - 0.713 0.794 - 0.725 si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
74. sumo3a ENSDARG00000028119 13447 2.223 - - - - - 0.770 0.704 - 0.749 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
75. pou3f2a ENSDARG00000070220 817 2.219 - - - - - 0.709 0.805 - 0.705 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
76. MAP4K4 ENSDARG00000098670 4665 2.21 - - 0.748 - - 0.734 - - 0.728 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
77. stap2a ENSDARG00000092810 591 2.206 - - - - - - 0.755 0.743 0.708 signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
78. FAM171A2 FAM171A2 707 2.206 - - - - - - 0.784 0.720 0.702
79. lypla2 ENSDARG00000053656 8971 2.201 - - - - - 0.791 0.702 - 0.708 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
80. khsrp ENSDARG00000026489 15738 2.198 - - - - - 0.784 0.710 - 0.704 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
81. ubap2 ubap2 4167 2.195 - - - - - 0.763 - 0.716 0.716
82. kdm1a ENSDARG00000060679 6152 2.192 - - 0.720 - - - 0.738 0.734 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
83. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 2.164 - - - - - 0.735 0.723 - 0.706 chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
84. jarid2b ENSDARG00000062268 2206 2.148 - - 0.721 - - 0.720 - - 0.707 jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
85. cks1b ENSDARG00000007971 2739 1.991 - 0.998 - - 0.993 - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
86. hif1ab ENSDARG00000034293 10284 1.907 - 0.960 - - 0.947 - - - - hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]
87. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 1.901 - 0.971 - - 0.930 - - - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
88. boc ENSDARG00000074335 4832 1.831 - 0.846 - - 0.985 - - - - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
89. rqcd1 2301 1.818 - - - - 0.995 0.823 - - - RCD1 required for cell differentiation1 homolog (S. pombe)
90. si:dkey-12j5.1 ENSDARG00000089480 3198 1.805 - 0.833 - - 0.972 - - - - si:dkey-12j5.1 [Source:ZFIN;Acc:ZDB-GENE-100922-71]
91. smarce1 ENSDARG00000016871 9628 1.801 - 0.985 - - - 0.816 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
92. rnf20 ENSDARG00000016664 3641 1.769 - - - - 0.994 0.775 - - - ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]
93. setbp1 ENSDARG00000093799 4499 1.765 - 0.999 - - - 0.766 - - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
94. btg2 ENSDARG00000020298 6616 1.763 - - - - 0.926 0.837 - - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
95. grin1a ENSDARG00000027828 1327 1.757 - - - - - 0.878 0.879 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
96. klc2 3058 1.754 - - - - 0.989 0.765 - - - kinesin light chain 2
97. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 1.752 - - - - 0.997 - 0.755 - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
98. wasf3 wasf3 3287 1.749 - - - - - 0.884 0.865 - -
99. max ENSDARG00000024844 6035 1.742 - 0.976 - - - - - - 0.766 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
100. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 1.739 - - - - 0.969 0.770 - - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]

There are 1910 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA