Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nisch

Gene Name Gene ID Reads Annotation
nisch ENSDARG00000043077 11 nischarin [Source:ZFIN;Acc:ZDB-GENE-050208-570]










Genes with expression patterns similar to nisch

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nisch ENSDARG00000043077 11 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000 nischarin [Source:ZFIN;Acc:ZDB-GENE-050208-570]
2. si:dkey-69c19.1 si:dkey-69c19.1 37 2 1.000 1.000 - - - - - - -
3. BX323793.1 ENSDARG00000104134 24 2 1.000 - - - - - - 1.000 - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
4. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 2 1.000 1.000 - - - - - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
5. myo1f ENSDARG00000078734 100 2 1.000 1.000 - - - - - - - myosin IF [Source:ZFIN;Acc:ZDB-GENE-081104-506]
6. Mar-03 Mar-03 44 2 1.000 1.000 - - - - - - -
7. hamp2 hamp2 67 2 1.000 1.000 - - - - - - -
8. si:ch211-153l6.4 si:ch211-153l6.4 45 1.947 - 0.947 - - - - - 1.000 -
9. si:dkey-188i13.10 ENSDARG00000075151 22 1.93 - 1.000 - - 0.930 - - - - si:dkey-188i13.10 [Source:ZFIN;Acc:ZDB-GENE-090313-208]
10. ndr1 ENSDARG00000057096, ENSDARG00000116539 10 1.905 0.919 0.986 - - - - - - - nodal-related 1 [Source:ZFIN;Acc:ZDB-GENE-990415-256]
11. mhc1uma ENSDARG00000039164 16 1.845 - - - - 0.845 - - 1.000 - major histocompatibility complex class I UMA [Source:ZFIN;Acc:ZDB-GENE-140820-1]
12. serpinf2a ENSDARG00000076448 4 1.843 - 0.936 - - - - - 0.907 - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2a [Source:ZFIN;Acc:ZDB-GENE-060822-1]
13. si:dkey-101d6.4 si:dkey-101d6.4 6 1.755 1.000 0.755 - - - - - - -
14. slc5a12 ENSDARG00000005004 15 1.719 - 1.000 - 0.719 - - - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
15. map1lc3c ENSDARG00000100528 31 1.715 0.786 - - - 0.929 - - - - microtubule-associated protein 1 light chain 3 gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1080]
16. ttc7a ENSDARG00000074760 39 1.54 0.753 - - - - - - - 0.787 tetratricopeptide repeat domain 7A [Source:ZFIN;Acc:ZDB-GENE-010319-27]
17. mfsd4b ENSDARG00000079571 556 1.438 0.716 - - - 0.722 - - - - major facilitator superfamily domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-070410-26]
18. plxnc1 ENSDARG00000015278 501 1 - 1.000 - - - - - - - plexin C1 [Source:ZFIN;Acc:ZDB-GENE-030131-1620]
19. si:dkey-14i17.1 si:dkey-14i17.1 1 1 - - - - - - - 1.000 -
20. CCHCR1_1 CCHCR1_1 1 1 - - - - - - - 1.000 -
21. PDE9A ENSDARG00000060280 58 1 1.000 - - - - - - - - phosphodiesterase 9A [Source:ZFIN;Acc:ZDB-GENE-130920-1]
22. cldn15b ENSDARG00000101109 4 1 - - - - - - - 1.000 - claudin 15b [Source:ZFIN;Acc:ZDB-GENE-060421-7652]
23. xrra1 ENSDARG00000089578 18 1 1.000 - - - - - - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
24. bcl11ba ENSDARG00000062510 169 1 1.000 - - - - - - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
25. cd74b ENSDARG00000036628 8 1 1.000 - - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
26. si:ch211-220f16.1 ENSDARG00000093977 4 1 1.000 - - - - - - - - si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]
27. si:dkeyp-86f8.2 si:dkeyp-86f8.2 5 1 1.000 - - - - - - - -
28. tbc1d22b ENSDARG00000026988 18 1 - 1.000 - - - - - - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
29. CABZ01073334.1 CABZ01073334.1 1 1 - - - - - - - 1.000 -
30. CABZ01059392.1 ENSDARG00000063108 3 1 - - - - - - - 1.000 - uncharacterized LOC100334305 [Source:NCBI gene;Acc:100334305]
31. CIT_1 CIT_1 6 1 1.000 - - - - - - - -
32. ANKRD27 ENSDARG00000089207 3 1 - - - - - - - 1.000 - ankyrin repeat domain 27 (VPS9 domain) [Source:ZFIN;Acc:ZDB-GENE-121105-1]
33. gltpd2 ENSDARG00000067889, ENSDARG00000114510 27 1 1.000 - - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
34. MFAP4_6 MFAP4_6 162 1 - 1.000 - - - - - - -
35. KCNJ3 KCNJ3 24 1 - 1.000 - - - - - - -
36. ca15c ENSDARG00000002259 1 1 - - - - - - - 1.000 - carbonic anhydrase XV c [Source:ZFIN;Acc:ZDB-GENE-061013-737]
37. ahdc1 ENSDARG00000093453 233 1 1.000 - - - - - - - - AT hook, DNA binding motif, containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-584]
38. ATG7 ENSDARG00000102893 1 1 1.000 - - - - - - - - ATG7 autophagy related 7 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1633]
39. FAM124B ENSDARG00000087489 16 1 1.000 - - - - - - - - family with sequence similarity 124B [Source:ZFIN;Acc:ZDB-GENE-130327-1]
40. esyt1b ENSDARG00000014239 8 1 1.000 - - - - - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
41. si:dkey-27i16.2 ENSDARG00000098293 48 1 1.000 - - - - - - - - si:dkey-27i16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9667]
42. guca1g ENSDARG00000045737, ENSDARG00000114717 22 1 - - - - - - - 1.000 - guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
43. adrb3b ENSDARG00000052919 16 1 1.000 - - - - - - - - adrenoceptor beta 3b [Source:ZFIN;Acc:ZDB-GENE-081022-154]
44. MAMDC4 MAMDC4 3 1 - - - - 1.000 - - - -
45. cx32.2 ENSDARG00000076789 23 1 - 1.000 - - - - - - - connexin 32.2 [Source:ZFIN;Acc:ZDB-GENE-050303-1]
46. tlr3 ENSDARG00000016065, ENSDARG00000117078 66 1 - 1.000 - - - - - - - toll-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040219-7]
47. pik3r5 ENSDARG00000102762 56 1 - 1.000 - - - - - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
48. asb13a.2 ENSDARG00000045765, ENSDARG00000109879 8 1 1.000 - - - - - - - - ankyrin repeat and SOCS box containing 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041210-88]
49. si:dkey-199m13.5 ENSDARG00000098876 4 1 - 1.000 - - - - - - - si:dkey-199m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-174]
50. CABZ01062083.1 CABZ01062083.1 40 1 1.000 - - - - - - - -
51. gbp4 ENSDARG00000068857, ENSDARG00000112635 55 1 1.000 - - - - - - - - guanylate binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-060531-46]
52. TMPRSS7 5 1 1.000 - - - - - - - - transmembrane protease, serine 7
53. frmd3 ENSDARG00000059885 1 1 - - - - - - - 1.000 - FERM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070523-1]
54. HIPK1 HIPK1 8 1 1.000 - - - - - - - -
55. si:dkey-258f14.3 ENSDARG00000075974 9 1 1.000 - - - - - - - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
56. si:rp71-26b20.1 si:rp71-26b20.1 11 1 - 1.000 - - - - - - -
57. ENSDARG00000037617 ENSDARG00000037617 1 1 1.000 - - - - - - - -
58. bicd1a ENSDARG00000079496 2 1 1.000 - - - - - - - - bicaudal D homolog 1a [Source:ZFIN;Acc:ZDB-GENE-081031-9]
59. brpf3 brpf3 15 1 - - - - 1.000 - - - -
60. CCDC18_1 CCDC18_1 3 1 - 1.000 - - - - - - -
61. FP340499.1 FP340499.1 0 1 - - - - - - - 1.000 -
62. CU570684.5 CU570684.5 55 1 1.000 - - - - - - - -
63. sox11a ENSDARG00000077811 25 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
64. slc5a9 ENSDARG00000005518 16 1 1.000 - - - - - - - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
65. CU681840.1 CU681840.1 3 1 - - - - 1.000 - - - -
66. TNFRSF11B ENSDARG00000098377 98 1 1.000 - - - - - - - - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
67. TNNI1 TNNI1 4 1 - - - - 1.000 - - - -
68. si:dkey-199m13.2 si:dkey-199m13.2 31 1 - 1.000 - - - - - - -
69. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1 - 1.000 - - - - - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
70. si:ch1073-155h21.1 ENSDARG00000007582 137 1 - - - - - - - 1.000 - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
71. sbno1 ENSDARG00000099080 10 1 - - - - 1.000 - - - - strawberry notch homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-080522-2]
72. si:ch211-241e1.5 ENSDARG00000008906 70 1 1.000 - - - - - - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
73. C20H2orf70 C20H2orf70 8 1 - - - - - - - 1.000 -
74. PGBD4_1 PGBD4_1 1 1 - 1.000 - - - - - - -
75. slc6a15 ENSDARG00000062821, ENSDARG00000109790, ENSDARG00000114469 5 1 - - - - - - - 1.000 - solute carrier family 6 (neutral amino acid transporter), member 15 [Source:ZFIN;Acc:ZDB-GENE-050420-93]
76. ENSDARG00000088134 ENSDARG00000088134 16 1 - 1.000 - - - - - - -
77. crybb1 ENSDARG00000068507 2255 1 1.000 - - - - - - - - crystallin, beta B1 [Source:ZFIN;Acc:ZDB-GENE-010813-1]
78. CR391995.1 ENSDARG00000098041 48 1 1.000 - - - - - - - -
79. als2a ENSDARG00000075111 29 1 1.000 - - - - - - - - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
80. slc44a1a ENSDARG00000015946 10 1 - 1.000 - - - - - - - solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
81. 5S_rRNA_16 5S_rRNA_16 10 1 - 1.000 - - - - - - -
82. si:dkey-92j16.1 si:dkey-92j16.1 1 1 - - - - - - - 1.000 -
83. CU928217.1 CU928217.1 12 1 1.000 - - - - - - - -
84. si:dkey-270b7.4 si:dkey-270b7.4 11 1 - 1.000 - - - - - - -
85. acoxl ENSDARG00000020149 14 1 1.000 - - - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
86. CABZ01023255.1 ENSDARG00000099984 13 1 - - - - 1.000 - - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:110438218]
87. chgb ENSDARG00000076500 42 1 1.000 - - - - - - - - chromogranin B [Source:ZFIN;Acc:ZDB-GENE-070705-268]
88. ifitm5 ENSDARG00000105153 132 1 1.000 - - - - - - - - interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
89. SH2D4A ENSDARG00000041378 6 1 1.000 - - - - - - - - SH2 domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-040426-932]
90. SECISBP2L 1 1 1.000 - - - - - - - - SECIS binding protein 2-like
91. si:rp71-36a1.1 ENSDARG00000095295 13 1 1.000 - - - - - - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
92. si:dkey-119p2.1 si:dkey-119p2.1 1 1 - - - - - - - 1.000 -
93. ccdc37 ccdc37 36 1 1.000 - - - - - - - -
94. si:dkey-233h12.4 si:dkey-233h12.4 2 1 1.000 - - - - - - - -
95. akap10 ENSDARG00000059549 1 1 1.000 - - - - - - - - A kinase (PRKA) anchor protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2535]
96. si:dkey-85k15.4 ENSDARG00000095047 25 1 1.000 - - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
97. CR388002.2 CR388002.2 3 1 1.000 - - - - - - - -
98. si:dkey-42p8.3 1117 1 - 1.000 - - - - - - - si:dkey-42p8.3, transcript variant X1
99. CR759816.1 ENSDARG00000098977 27 1 1.000 - - - - - - - -
100. rtdr1 rtdr1 158 1 1.000 - - - - - - - -

There are 787 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA