Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nipblb

Gene Name Gene ID Reads Annotation
nipblb ENSDARG00000061052 6109 nipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]










Genes with expression patterns similar to nipblb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nipblb ENSDARG00000061052 6109 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]
2. srrm1 ENSDARG00000001244 4972 3.24 - 0.845 - - - 0.769 0.825 0.801 - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
3. shfm1 7620 3.214 - 0.705 - 0.989 - - 0.772 0.748 - split hand/foot malformation (ectrodactyly) type 1
4. smarca4 smarca4 9726 2.576 - - - - - 0.859 0.776 - 0.941
5. pl10 pl10 10795 2.57 - 0.828 - 0.971 - - 0.771 - -
6. rnps1 ENSDARG00000116743 9994 2.335 - - - 0.873 - 0.758 0.704 - - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
7. cstf1 ENSDARG00000044820 1663 2.283 - 0.831 - - - 0.747 0.705 - - cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958]
8. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.97 - - - 0.989 - - - - 0.981 HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
9. ube2v2 ENSDARG00000028198 23341 1.752 - - - 0.976 - - 0.776 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
10. dlg5a ENSDARG00000074059 1834 1.744 - - - 0.995 - - - 0.749 - discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
11. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 1.741 - - - - - - - 0.744 0.997 atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
12. ahcy ENSDARG00000005191 50741 1.727 - - - 0.924 - - - - 0.803 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
13. GUSB ENSDARG00000063126 2712 1.72 - 0.723 - 0.997 - - - - - glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
14. ptrhd1 ENSDARG00000016122 2705 1.711 - - - - - - - 0.716 0.995 peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
15. cdc25 cdc25 3913 1.706 - - - - - 0.708 - - 0.998
16. inppl1a ENSDARG00000104222 6256 1.701 - 0.714 - 0.987 - - - - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
17. tgif1 ENSDARG00000059337 4020 1.66 - 0.810 - - - - - 0.850 - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
18. cx43.4 ENSDARG00000007099 16369 1.64 - - - 0.912 - 0.728 - - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
19. bzw1a ENSDARG00000010481 28451 1.632 - - 0.772 0.860 - - - - - basic leucine zipper and W2 domains 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3951]
20. ssbp4 ENSDARG00000056483 10196 1.618 - - 0.810 - - 0.808 - - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
21. gna11b ENSDARG00000053326 5118 1.615 - - - - - 0.843 0.772 - - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
22. ptenb ENSDARG00000056623 5783 1.602 - 0.800 - - - - 0.802 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
23. cd99l2 ENSDARG00000056722 5036 1.596 - 0.784 - - - - - 0.812 - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
24. fkbp9 ENSDARG00000005023 17518 1.571 - 0.853 - 0.718 - - - - - FK506 binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-040801-23]
25. ss18 ENSDARG00000002970 2618 1.559 - 0.831 - - - - 0.728 - - synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
26. CREBZF ENSDARG00000089787 4261 1.557 - - - - - - 0.719 0.838 - CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
27. srsf4 ENSDARG00000105293 9657 1.536 - - - - - - 0.705 - 0.831 serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
28. ncl1 2835 1.536 - 0.772 - - - - 0.764 - - nicalin, transcript variant X3
29. kdm5bb ENSDARG00000003098 531 1.523 - 0.762 - - - - - 0.761 - lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
30. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 1.522 - - - - - 0.706 - 0.816 - actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
31. nr2f6b ENSDARG00000003165 5855 1.52 - 0.759 - - - - 0.761 - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
32. TNKS TNKS 2775 1.514 - 0.774 - - - - 0.740 - -
33. prpf4bb ENSDARG00000040310 2260 1.507 - - - - - - 0.762 0.745 - pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
34. kpna3 ENSDARG00000052641 5347 1.507 - 0.806 - - - - 0.701 - - karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
35. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.503 - - - - - 0.782 - 0.721 - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
36. kidins220b ENSDARG00000017338 1937 1.492 - - - - - - 0.728 0.764 - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
37. btg3 ENSDARG00000069065, ENSDARG00000115730 1632 1.486 - 0.734 - - - - - 0.752 - B-cell translocation gene 3 [Source:ZFIN;Acc:ZDB-GENE-031113-19]
38. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.481 - - - - - 0.748 0.733 - - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
39. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 1.472 - 0.701 - - - 0.771 - - -
40. ercc1 ENSDARG00000031680 900 1.468 - - - - - 0.718 - 0.750 - excision repair cross-complementation group 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2606]
41. agpat3 ENSDARG00000036549 1093 1.466 - 0.747 - - - - - 0.719 - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
42. vps36 ENSDARG00000057021 636 1.466 - 0.720 - - - - - 0.746 - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
43. arid2 ENSDARG00000007413 4413 1.463 - - - - - - 0.718 0.745 - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
44. ep300b ENSDARG00000061108 5173 1.457 - - - - - - 0.703 0.754 - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
45. gle1 ENSDARG00000043559 1362 1.44 - - - - - - 0.711 0.729 - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
46. pabpc1b ENSDARG00000021140 5729 1.44 - 0.713 - - - - 0.727 - - poly A binding protein, cytoplasmic 1 b [Source:ZFIN;Acc:ZDB-GENE-050308-1]
47. si:rp71-1g18.1 ENSDARG00000053792, ENSDARG00000111192 437 1.439 - 0.737 - - - 0.702 - - - si:rp71-1g18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5470]
48. srsf9 ENSDARG00000008097 2405 1.436 - 0.713 - - - - - 0.723 - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
49. kif22 ENSDARG00000102624 3694 1.435 - - - - - 0.724 0.711 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
50. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.435 - 0.732 - - - - 0.703 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
51. nucks1a ENSDARG00000078473 28285 1.434 - 0.715 - - - 0.719 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
52. atp6v0a1b ENSDARG00000015174 1052 1.432 - 0.726 - - - - - 0.706 - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
53. heatr5a ENSDARG00000023999 278 1.43 - 0.716 - - - 0.714 - - - HEAT repeat containing 5a [Source:ZFIN;Acc:ZDB-GENE-030616-152]
54. whsc1l1 8544 1.428 - - - - - 0.706 0.722 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
55. schip1 ENSDARG00000035175 3838 1.423 - - - - - 0.703 - 0.720 - schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
56. FRMD4A ENSDARG00000042249 2883 0.998 - - - - - - - - 0.998 FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
57. si:dkey-67c22.2 ENSDARG00000055389 6410 0.998 - - - - - - - - 0.998 si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
58. cenpf ENSDARG00000055133 5267 0.998 - - - - - - - - 0.998 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
59. fam50a ENSDARG00000024895 3020 0.997 - - - - - - - - 0.997 family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
60. bin3 ENSDARG00000099651 3295 0.997 - - - - - - - - 0.997 bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
61. dctd ENSDARG00000036990 2168 0.997 - - - 0.997 - - - - - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
62. tspan5a ENSDARG00000086033 1865 0.997 - - - 0.997 - - - - - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
63. wu:fe05a04 ENSDARG00000087530 843 0.997 - - - 0.997 - - - - - wu:fe05a04 [Source:ZFIN;Acc:ZDB-GENE-030131-4873]
64. skib ENSDARG00000008034 6518 0.997 - - - 0.997 - - - - - v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
65. PACS1 PACS1 2061 0.997 - - - 0.997 - - - - -
66. kctd10 ENSDARG00000017115 1659 0.997 - - - 0.997 - - - - - potassium channel tetramerization domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2843]
67. rufy3 ENSDARG00000029692 3031 0.997 - - - - - - - - 0.997 RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
68. snrnp27 ENSDARG00000035625 9080 0.997 - - - - - - - - 0.997 small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
69. plxna1 plxna1 1357 0.997 - - - 0.997 - - - - -
70. si:ch211-262h13.3 ENSDARG00000070898 2094 0.997 - - - - - - - - 0.997 si:ch211-262h13.3 [Source:ZFIN;Acc:ZDB-GENE-050208-532]
71. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.997 - - - 0.997 - - - - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
72. psma6b ENSDARG00000013966 4410 0.997 - - - - - - - - 0.997 proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
73. gpsm1a ENSDARG00000092517 784 0.997 - - - 0.997 - - - - - G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
74. ZNF337_6 ZNF337_6 898 0.997 - - - 0.997 - - - - -
75. rbms2b ENSDARG00000056150, ENSDARG00000115483 2104 0.996 - - - - - - - - 0.996 RNA binding motif, single stranded interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-51]
76. IGLON5 ENSDARG00000022176 1353 0.996 - - - - - - - - 0.996 IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
77. il1rapl1a ENSDARG00000062045, ENSDARG00000115285 1200 0.996 - - - - - - - - 0.996 interleukin 1 receptor accessory protein-like 1a [Source:ZFIN;Acc:ZDB-GENE-061013-249]
78. ing5b ENSDARG00000068175 2502 0.996 - - - 0.996 - - - - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
79. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.996 - - - 0.996 - - - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
80. efnb3b ENSDARG00000042277 5823 0.996 - - - - - - - - 0.996 ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
81. meaf6 ENSDARG00000101216 6865 0.996 - - - - - - - - 0.996 MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
82. camk2n1a ENSDARG00000025855 1467 0.996 - - - 0.996 - - - - - calcium/calmodulin-dependent protein kinase II inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-319]
83. snapin ENSDARG00000062382 1531 0.996 - - - - - - - - 0.996 SNAP-associated protein [Source:ZFIN;Acc:ZDB-GENE-060503-343]
84. kif3cb ENSDARG00000079500 935 0.996 - - - - - - - - 0.996 kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
85. zgc:162944 ENSDARG00000069846, ENSDARG00000112524 3898 0.996 - - - 0.996 - - - - - zgc:162944 [Source:ZFIN;Acc:ZDB-GENE-070424-75]
86. CT955984.1 ENSDARG00000113577 1482 0.996 - - - - - - - - 0.996
87. mrpl12 ENSDARG00000038768 5539 0.996 - - - - - - - - 0.996 mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
88. atg5 ENSDARG00000023396 1726 0.996 - - - - - - - - 0.996 ATG5 autophagy related 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-149]
89. rps8a ENSDARG00000055996 2785 0.996 - - - 0.996 - - - - - ribosomal protein S8a [Source:ZFIN;Acc:ZDB-GENE-030131-8626]
90. acadsb ENSDARG00000076780 2382 0.996 - - - 0.996 - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
91. arl8bb ENSDARG00000070318 1428 0.996 - - - - - - - - 0.996 ADP-ribosylation factor-like 8Bb [Source:ZFIN;Acc:ZDB-GENE-080516-10]
92. ak2 ENSDARG00000005926 7598 0.996 - - - 0.996 - - - - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
93. pigk ENSDARG00000024479 1386 0.996 - - - - - - - - 0.996 phosphatidylinositol glycan anchor biosynthesis, class K [Source:ZFIN;Acc:ZDB-GENE-040625-162]
94. pnn ENSDARG00000015851 1269 0.996 - - - 0.996 - - - - - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
95. yme1l1a ENSDARG00000075192 2634 0.996 - - - 0.996 - - - - - YME1-like 1a [Source:ZFIN;Acc:ZDB-GENE-091113-41]
96. RTKN RTKN 1537 0.996 - - - 0.996 - - - - -
97. CR382363.1 ENSDARG00000097381 1637 0.996 - - - 0.996 - - - - -
98. agxt2 ENSDARG00000100709 799 0.996 - - - 0.996 - - - - - alanine--glyoxylate aminotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-100]
99. senp3a ENSDARG00000095538, ENSDARG00000116812 2292 0.996 - - - 0.996 - - - - - SUMO specific peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2303]
100. nucb2b ENSDARG00000036291 911 0.996 - - - 0.996 - - - - - nucleobindin 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4775]

There are 897 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA