Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nipal3

Gene Name Gene ID Reads Annotation
nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]










Genes with expression patterns similar to nipal3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
2. lxn ENSDARG00000043102 415 2.608 0.729 - - - - 0.893 - - 0.986 latexin [Source:ZFIN;Acc:ZDB-GENE-041212-18]
3. grp ENSDARG00000043074 747 2.592 - 0.712 - - - 0.901 - - 0.979 gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
4. tfap2a ENSDARG00000059279 3741 2.504 - 0.749 0.990 - - - - - 0.765 transcription factor AP-2 alpha [Source:ZFIN;Acc:ZDB-GENE-011212-6]
5. sly1 sly1 2403 2.496 - - - - - 0.702 0.867 - 0.927
6. CR847496.2 ENSDARG00000116070 802 2.37 0.743 - - - - 0.871 - 0.756 - platelet derived growth factor c [Source:NCBI gene;Acc:560564]
7. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.968 - - 0.995 - - - - - 0.973 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
8. SIK1 ENSDARG00000058606 1982 1.906 - - 0.997 - - 0.909 - - - salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
9. hspa4a ENSDARG00000004754 3439 1.892 - - 0.976 - - - - - 0.916 heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]
10. si:dkey-240e12.6 ENSDARG00000110137 674 1.884 - - 0.999 - - 0.885 - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
11. ZBTB41 ENSDARG00000054984 464 1.873 - 0.874 0.999 - - - - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
12. traf2b ENSDARG00000101036 429 1.868 - - - - - 0.899 - - 0.969 Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
13. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 1.866 - - 0.995 - - 0.871 - - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
14. dnajb9a ENSDARG00000052072 578 1.862 - - - - - 0.887 - - 0.975 DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
15. col4a3 ENSDARG00000003395 499 1.847 - - - - - 0.880 - - 0.967 collagen, type IV, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070802-4]
16. aacs ENSDARG00000012468 1138 1.834 - - - - - - - 0.866 0.968 acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
17. gcnt4a ENSDARG00000035198, ENSDARG00000110336 661 1.828 - - - - - 0.848 - - 0.980 glucosaminyl (N-acetyl) transferase 4, core 2, a [Source:ZFIN;Acc:ZDB-GENE-030131-3231]
18. sh3rf1 ENSDARG00000070470 1463 1.826 - - - - - 0.874 - - 0.952 SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
19. foxo3b ENSDARG00000042904 5046 1.793 - 0.806 0.987 - - - - - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
20. ZC3H11A ENSDARG00000009754 281 1.787 - 0.899 - - - 0.888 - - - zinc finger CCCH-type containing 11A [Source:ZFIN;Acc:ZDB-GENE-030131-3272]
21. ypel3 ENSDARG00000055510 1344 1.785 - 0.802 - - - - - - 0.983 yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
22. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.775 - - - - - 0.872 - - 0.903 claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
23. adipor1b ENSDARG00000042717 1348 1.764 - - - - - 0.836 - - 0.928 adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
24. cdc20 ENSDARG00000100741 3264 1.758 - - - - - 0.908 - - 0.850 cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
25. cebpg ENSDARG00000036073 3791 1.755 - - 0.989 - - 0.766 - - - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
26. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 1.752 - - - - - 0.903 - 0.849 - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
27. laptm4a ENSDARG00000006397 1698 1.745 - - 0.998 - - 0.747 - - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
28. kbp kbp 701 1.745 - - - - - 0.776 - - 0.969
29. grpel2 ENSDARG00000069421 5673 1.738 - - 0.985 - - - - - 0.753 GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
30. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.738 - - - - - - - 0.795 0.943 asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
31. psmb6 ENSDARG00000002240 8015 1.735 - - 0.836 - - 0.899 - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
32. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.728 - - 0.966 - - 0.762 - - - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
33. tjp3 ENSDARG00000002909 1978 1.728 - - 0.901 - - 0.827 - - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
34. lsm14aa ENSDARG00000006600 2298 1.719 - - 0.993 - - 0.726 - - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
35. sec23a ENSDARG00000104230 3910 1.709 - - 0.973 - - - - - 0.736 Sec23 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2823]
36. ZACN ZACN 502 1.705 - 0.844 - - - 0.861 - - -
37. acadl ENSDARG00000088357, ENSDARG00000115321 1179 1.7 - - - - - 0.717 - - 0.983 acyl-CoA dehydrogenase long chain [Source:ZFIN;Acc:ZDB-GENE-040426-771]
38. aldh3a2b ENSDARG00000029381 2187 1.696 - - - - - - 0.766 - 0.930 aldehyde dehydrogenase 3 family, member A2b [Source:ZFIN;Acc:ZDB-GENE-040912-103]
39. gabarapl2 ENSDARG00000027200 5120 1.694 - - 0.979 - - 0.715 - - - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
40. rfx2 ENSDARG00000013575 1275 1.692 - - - - - 0.739 - - 0.953 regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
41. ebp ENSDARG00000046098 502 1.686 - 0.708 - - - - - - 0.978 EBP, cholestenol delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-040718-12]
42. si:dkey-13i19.8 ENSDARG00000093058 4617 1.686 - - - - - 0.768 - - 0.918 si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
43. cbfa2t2 ENSDARG00000074337 4323 1.678 - - - - - 0.802 - - 0.876 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
44. CDC42EP1_1 CDC42EP1_1 449 1.675 - - - - - - - 0.701 0.974
45. capn8 ENSDARG00000055715, ENSDARG00000111228 497 1.67 - - - - - 0.879 0.791 - - calpain 8 [Source:ZFIN;Acc:ZDB-GENE-050522-279]
46. myeov2 3351 1.669 - - - - - 0.773 - - 0.896 myeloma overexpressed 2
47. strbp ENSDARG00000021455 1279 1.668 - - - - - 0.727 - - 0.941 spermatid perinuclear RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030729-18]
48. znf750 ENSDARG00000102267 327 1.664 - - - - - 0.886 0.778 - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
49. alg2 ENSDARG00000070399 772 1.664 0.710 - - - - - - - 0.954 asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060502-2]
50. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.662 - 0.750 - - - - - - 0.912 furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
51. dap ENSDARG00000000069, ENSDARG00000114419 13155 1.653 - - 0.880 - - - - - 0.773 death-associated protein [Source:ZFIN;Acc:ZDB-GENE-000511-3]
52. PCSK6 ENSDARG00000104574 710 1.647 - - - 0.759 - 0.888 - - - proprotein convertase subtilisin/kexin type 6 [Source:ZFIN;Acc:ZDB-GENE-100908-1]
53. srek1ip1 ENSDARG00000043728 985 1.646 - 0.776 - - - 0.870 - - - SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
54. st6gal2l st6gal2l 292 1.644 - 0.736 - - - 0.908 - - -
55. emilin3a ENSDARG00000078052 1652 1.643 - - - 0.763 - - - - 0.880 elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
56. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.637 - - - - - 0.800 - - 0.837 transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
57. uba3 ENSDARG00000057987, ENSDARG00000116639 1181 1.634 - 0.713 - - - 0.921 - - - ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]
58. EMP3 EMP3 523 1.632 - 0.853 - - - - - 0.779 -
59. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 1.63 - 0.764 - - - 0.866 - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
60. nus1 ENSDARG00000027813 1417 1.627 - - - - - 0.902 0.725 - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:ZFIN;Acc:ZDB-GENE-040718-48]
61. macc1 ENSDARG00000040717 1669 1.625 - - - - - 0.921 0.704 - - metastasis associated in colon cancer 1 [Source:ZFIN;Acc:ZDB-GENE-091006-3]
62. acn9 acn9 520 1.62 - 0.772 - - - 0.848 - - -
63. hif1ab ENSDARG00000034293 10284 1.619 - - 0.855 - - - - - 0.764 hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]
64. cyp7c1 cyp7c1 1214 1.599 - - - - - 0.867 0.732 - -
65. prrx1a ENSDARG00000033971 1786 1.59 - 0.701 - - - 0.889 - - - paired related homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020905-5]
66. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 1.587 - 0.859 0.728 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
67. si:ch211-194e15.5 ENSDARG00000061804 253 1.585 - 0.755 - - - - - 0.830 - si:ch211-194e15.5 [Source:ZFIN;Acc:ZDB-GENE-060503-393]
68. scinlb ENSDARG00000058348 1466 1.573 - 0.776 - - - 0.797 - - - scinderin like b [Source:ZFIN;Acc:ZDB-GENE-040426-2068]
69. skap2 ENSDARG00000000906 146 1.568 - 0.811 - 0.757 - - - - - src kinase associated phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-438]
70. mgst1 mgst1 2820 1.567 - - - - - 0.861 0.706 - -
71. crabp2b ENSDARG00000030449 3091 1.566 - 0.840 - 0.726 - - - - - cellular retinoic acid binding protein 2, b [Source:ZFIN;Acc:ZDB-GENE-050208-52]
72. CR848745.1 CR848745.1 814 1.563 - 0.708 - - - 0.855 - - -
73. TMEM30B ENSDARG00000054122 1519 1.562 - 0.825 - - - 0.737 - - - transmembrane protein 30B [Source:ZFIN;Acc:ZDB-GENE-040704-17]
74. SLC22A16 ENSDARG00000015869 1086 1.561 - - - - - 0.826 0.735 - - solute carrier family 22 (organic cation/carnitine transporter), member 16 [Source:ZFIN;Acc:ZDB-GENE-041001-166]
75. ef1 1343 1.56 - 0.760 - - - 0.800 - - - E74-like factor 1 (ets domain transcription factor), transcript variant X4
76. clk4b ENSDARG00000005908 915 1.557 - 0.720 - - - 0.837 - - - CDC-like kinase 4b [Source:ZFIN;Acc:ZDB-GENE-050227-19]
77. ptgs2b ENSDARG00000010276 692 1.544 - 0.705 - - - 0.839 - - - prostaglandin-endoperoxide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-041014-323]
78. gbas gbas 735 1.539 - 0.729 - - - 0.810 - - -
79. FUZ ENSDARG00000079730 821 1.535 - 0.757 - - - 0.778 - - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
80. hoxa13a ENSDARG00000100312 543 1.527 - 0.817 - - - - - 0.710 - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
81. rasl11a ENSDARG00000046013 1627 1.526 - - - - - 0.813 0.713 - - RAS-like, family 11, member A [Source:ZFIN;Acc:ZDB-GENE-050417-384]
82. gnpnat1 ENSDARG00000039892 709 1.522 - - - - - 0.772 - 0.750 - glucosamine-phosphate N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-450]
83. si:ch211-243g18.2 ENSDARG00000044261 4483 1.519 - 0.736 - - - - - - 0.783 si:ch211-243g18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2830]
84. ostc ENSDARG00000104901 16240 1.518 - - 0.726 - - 0.792 - - - oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
85. mid1ip1b ENSDARG00000019302 1589 1.518 - 0.712 - - - 0.806 - - - MID1 interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1720]
86. BX890577.1 BX890577.1 257 1.515 - 0.733 - 0.782 - - - - -
87. IL17RD ENSDARG00000098359 2309 1.513 - - - - - 0.753 0.760 - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
88. tmprss4a ENSDARG00000103117 841 1.507 - 0.734 - - - - 0.773 - - transmembrane serine protease 4a [Source:ZFIN;Acc:ZDB-GENE-061103-631]
89. abhd2a ENSDARG00000025797 312 1.505 - 0.795 - - - - 0.710 - - abhydrolase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-040426-784]
90. si:dkeyp-89c11.3 si:dkeyp-89c11.3 343 1.504 0.738 - - - - - 0.766 - -
91. cln8 ENSDARG00000075525, ENSDARG00000113042 601 1.503 - 0.771 - 0.732 - - - - - CLN8, transmembrane ER and ERGIC protein [Source:ZFIN;Acc:ZDB-GENE-060906-3]
92. fam46bb 601 1.501 - - - 0.703 - - - - 0.798 family with sequence similarity 46, member Bb
93. ano10a ENSDARG00000057736 1306 1.497 - 0.713 - - - - 0.784 - - anoctamin 10a [Source:ZFIN;Acc:ZDB-GENE-050913-43]
94. uqcc uqcc 4742 1.483 - - - - - 0.762 - - 0.721
95. TMEM246 ENSDARG00000061553 168 1.48 - 0.717 - 0.763 - - - - - transmembrane protein 246 [Source:ZFIN;Acc:ZDB-GENE-061013-692]
96. ppt1 ENSDARG00000039980 1599 1.473 - 0.731 - - - 0.742 - - - palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile) [Source:ZFIN;Acc:ZDB-GENE-040426-2653]
97. zgc:162183 ENSDARG00000074663, ENSDARG00000116229 403 1.472 - - - - - 0.762 - 0.710 - zgc:162183 [Source:ZFIN;Acc:ZDB-GENE-070410-30]
98. CYYR1 ENSDARG00000103783 4107 1.464 - - - - - - - 0.722 0.742 cysteine/tyrosine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2356]
99. si:dkey-221j11.3 ENSDARG00000093304 1001 1.46 - 0.718 - - - - 0.742 - - si:dkey-221j11.3 [Source:ZFIN;Acc:ZDB-GENE-090313-247]
100. TSPAN4 TSPAN4 941 1.458 - - - - - 0.711 - 0.747 -

There are 1673 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA