Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nip7

Gene Name Gene ID Reads Annotation
nip7 ENSDARG00000059075 3964 NIP7, nucleolar pre-rRNA processing protein [Source:ZFIN;Acc:ZDB-GENE-050522-256]










Genes with expression patterns similar to nip7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nip7 ENSDARG00000059075 3964 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NIP7, nucleolar pre-rRNA processing protein [Source:ZFIN;Acc:ZDB-GENE-050522-256]
2. mrps25 ENSDARG00000041306 3654 1.815 0.815 - - - 1.000 - - - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
3. AKAP2 AKAP2 4178 1.649 0.788 0.861 - - - - - - -
4. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 1.642 - 0.931 - - - - 0.711 - - pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
5. ZNF70_11 ZNF70_11 1246 1.626 - 0.863 - - - - 0.763 - -
6. CYYR1 ENSDARG00000103783 4107 1.571 0.725 0.846 - - - - - - - cysteine/tyrosine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2356]
7. npm1b ENSDARG00000037675 5448 1.566 - 0.851 - - - - 0.715 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
8. rbm8a ENSDARG00000016516 8789 1.559 - 0.744 - - - - 0.815 - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
9. casq2 ENSDARG00000008982 21802 1.558 0.721 0.837 - - - - - - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
10. hnrnpul1 ENSDARG00000040564 6550 1.557 0.705 0.852 - - - - - - - heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
11. vwde ENSDARG00000103443 5758 1.511 0.744 - - - - 0.767 - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
12. C1H7orf55 C1H7orf55 2552 1.501 0.729 - - - - - 0.772 - -
13. fkbp3 ENSDARG00000098059 5428 1.491 - 0.784 - - - - 0.707 - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
14. nop58 ENSDARG00000104353 8497 1.488 0.761 - - - - - 0.727 - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
15. hars ENSDARG00000003693 7217 1.487 0.735 - - - - 0.752 - - - histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
16. crip2 ENSDARG00000070670 4844 1.48 - 0.779 - - - 0.701 - - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
17. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 1.473 0.701 0.772 - - - - - - - ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
18. nhp2l1b nhp2l1b 3898 1.448 0.730 - - - - - 0.718 - -
19. CUTA CUTA 1149 1.422 0.705 - - - - - 0.717 - -
20. C25H1orf51 C25H1orf51 2460 1 - - - - 1.000 - - - -
21. six3b ENSDARG00000054879 2416 1 - - - - 1.000 - - - - SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
22. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 1 - - - - 1.000 - - - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
23. acyp1 ENSDARG00000060126 2161 1 - - - - 1.000 - - - - acylphosphatase 1, erythrocyte (common) type [Source:ZFIN;Acc:ZDB-GENE-050309-125]
24. sh3kbp1 ENSDARG00000075853 2838 1 - - - - 1.000 - - - - SH3-domain kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-186]
25. pcgf6 ENSDARG00000069681 2382 1 - - - - 1.000 - - - - polycomb group ring finger 6 [Source:ZFIN;Acc:ZDB-GENE-060526-178]
26. si:dkey-191j3.3 si:dkey-191j3.3 1987 1 - - - - 1.000 - - - -
27. snap25a ENSDARG00000020609 4537 1 - - - - 1.000 - - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
28. nrp2a_1 ENSDARG00000096546 3358 1 - - - - 1.000 - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
29. taf9 ENSDARG00000077870 6992 1 - - - - 1.000 - - - - TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
30. ncalda ENSDARG00000070688 5069 1 - - - - 1.000 - - - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
31. furina ENSDARG00000062909, ENSDARG00000117158 6313 0.999 - - - - 0.999 - - - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
32. phgdh ENSDARG00000001873 8325 0.999 - - - - 0.999 - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
33. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 0.999 - - - - 0.999 - - - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
34. ppp5c ENSDARG00000034313 8794 0.999 - - - - 0.999 - - - - protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
35. mrpl17 ENSDARG00000075677 1840 0.999 - 0.999 - - - - - - - mitochondrial ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-040912-133]
36. tegt ENSDARG00000077934 27182 0.999 - - - - 0.999 - - - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
37. ptprnb ENSDARG00000077047 2743 0.999 - - - - 0.999 - - - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
38. rbm34 ENSDARG00000101877 1573 0.999 - 0.999 - - - - - - - RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
39. rbb4 rbb4 15541 0.999 - - - - 0.999 - - - -
40. anxa1a ENSDARG00000026726 23173 0.998 - - - - 0.998 - - - - annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
41. uqcrq ENSDARG00000029064, ENSDARG00000116372 32190 0.997 - - - - 0.997 - - - - ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
42. atp5h 18018 0.997 - - - - 0.997 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
43. FOXK2 ENSDARG00000030583 5500 0.997 - - - - 0.997 - - - - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
44. anp32b ENSDARG00000023330 25013 0.995 - - - - 0.995 - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
45. zgc:158409 zgc:158409 21963 0.992 - - - - 0.992 - - - -
46. vps35 ENSDARG00000008224 13245 0.992 - - - - 0.992 - - - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
47. fbxo28 ENSDARG00000027159 9602 0.99 - - - - 0.990 - - - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
48. sap130a ENSDARG00000056924 3156 0.988 - - - - 0.988 - - - - Sin3A-associated protein a [Source:ZFIN;Acc:ZDB-GENE-070615-5]
49. znf706 ENSDARG00000056307 12518 0.988 - - - - 0.988 - - - - zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
50. gcn1l1 gcn1l1 6031 0.982 - 0.982 - - - - - - -
51. rpl27 ENSDARG00000015128 108038 0.979 - - - - 0.979 - - - - ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
52. atp5g1 51897 0.977 - - - - 0.977 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
53. capns1b ENSDARG00000013804 37726 0.973 - - - - 0.973 - - - - calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
54. cmpk ENSDARG00000019924 8676 0.972 - 0.972 - - - - - - - cytidylate kinase [Source:ZFIN;Acc:ZDB-GENE-040426-2113]
55. uba52 ENSDARG00000041435 50415 0.958 - - - - 0.958 - - - - ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
56. zgc:92533 zgc:92533 141172 0.95 - - - - 0.950 - - - -
57. hif1al ENSDARG00000100826 18627 0.949 - 0.949 - - - - - - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
58. ccnd1 ENSDARG00000101637 34762 0.943 - - - - 0.943 - - - - cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
59. aimp1 ENSDARG00000060036 5343 0.935 - 0.935 - - - - - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
60. p4hb ENSDARG00000105116, ENSDARG00000116847 6885 0.928 - 0.928 - - - - - - - prolyl 4-hydroxylase, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-080610-1]
61. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 0.926 - 0.926 - - - - - - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
62. rps15a ENSDARG00000010160 94499 0.925 - - - - 0.925 - - - - ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
63. ppiaa ENSDARG00000009212 290634 0.912 - - - - 0.912 - - - - peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
64. ammecr1 ENSDARG00000012892 14475 0.908 - 0.908 - - - - - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
65. nucb2a ENSDARG00000036299, ENSDARG00000112218 10499 0.9 - 0.900 - - - - - - - nucleobindin 2a [Source:ZFIN;Acc:ZDB-GENE-030826-14]
66. hdac1 ENSDARG00000015427 19804 0.884 - - - - 0.884 - - - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
67. prmt1 ENSDARG00000010246 11311 0.874 - - - - - - 0.874 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
68. si:ch211-13f8.1 ENSDARG00000093342 274 0.87 - 0.870 - - - - - - - si:ch211-13f8.1 [Source:ZFIN;Acc:ZDB-GENE-061207-4]
69. lbx1a ENSDARG00000018321 634 0.87 - 0.870 - - - - - - - ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040724-40]
70. brca2 ENSDARG00000079015 410 0.87 - 0.870 - - - - - - - breast cancer 2, early onset [Source:ZFIN;Acc:ZDB-GENE-060510-3]
71. SFT2D2_1 SFT2D2_1 219 0.87 - 0.870 - - - - - - -
72. hic1 ENSDARG00000055493 219 0.87 - 0.870 - - - - - - - hypermethylated in cancer 1 [Source:ZFIN;Acc:ZDB-GENE-040713-2]
73. CABZ01061717.1 CABZ01061717.1 320 0.87 - 0.870 - - - - - - -
74. ms4a17a.7 ENSDARG00000043796 352 0.87 - 0.870 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.7 [Source:ZFIN;Acc:ZDB-GENE-080829-2]
75. lsm1 ENSDARG00000043177 767 0.87 - 0.870 - - - - - - - LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
76. cnot11 ENSDARG00000068596 829 0.869 - 0.869 - - - - - - - CCR4-NOT transcription complex, subunit 11 [Source:ZFIN;Acc:ZDB-GENE-030131-8068]
77. plp1a ENSDARG00000103732 3544 0.869 - 0.869 - - - - - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
78. pigp ENSDARG00000038805 611 0.869 - 0.869 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class P [Source:ZFIN;Acc:ZDB-GENE-030131-4041]
79. naa15b ENSDARG00000030368 535 0.869 - 0.869 - - - - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-6031]
80. hoxa5a ENSDARG00000102501 1667 0.869 - 0.869 - - - - - - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
81. ccng1 ENSDARG00000076667, ENSDARG00000110260 40792 0.869 - 0.869 - - - - - - - cyclin G1 [Source:ZFIN;Acc:ZDB-GENE-020322-1]
82. si:ch211-251b21.1 ENSDARG00000007275 15724 0.869 - 0.869 - - - - - - - si:ch211-251b21.1 [Source:ZFIN;Acc:ZDB-GENE-060809-5]
83. tnfaip1 ENSDARG00000041565, ENSDARG00000113688, ENSDARG00000115018 553 0.869 - 0.869 - - - - - - - tumor necrosis factor, alpha-induced protein 1 (endothelial) [Source:ZFIN;Acc:ZDB-GENE-030131-5610]
84. sema3gb ENSDARG00000013607 1531 0.869 - 0.869 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb [Source:ZFIN;Acc:ZDB-GENE-050513-4]
85. crabp2a ENSDARG00000073978 868 0.869 - 0.869 - - - - - - - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
86. RMDN2 ENSDARG00000078761 717 0.869 - 0.869 - - - - - - - regulator of microtubule dynamics 2 [Source:ZFIN;Acc:ZDB-GENE-111223-1]
87. ogfr ENSDARG00000037837 1001 0.869 - 0.869 - - - - - - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
88. rarga ENSDARG00000034117 1238 0.869 - 0.869 - - - - - - - retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
89. zgc:110191 zgc:110191 359 0.869 - 0.869 - - - - - - -
90. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 0.869 - 0.869 - - - - - - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
91. stim1a ENSDARG00000060723 1200 0.869 - 0.869 - - - - - - - stromal interaction molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-914]
92. uqcrfs1 ENSDARG00000007745 4654 0.869 - 0.869 - - - - - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
93. recql ENSDARG00000007175 501 0.869 - 0.869 - - - - - - - RecQ helicase-like [Source:ZFIN;Acc:ZDB-GENE-050809-134]
94. capn1a ENSDARG00000052702 1123 0.868 - 0.868 - - - - - - - calpain 1, (mu/I) large subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-1263]
95. aes ENSDARG00000021805, ENSDARG00000115836 1533 0.868 - 0.868 - - - - - - - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
96. rab8b ENSDARG00000068628, ENSDARG00000111270, ENSDARG00000114110 607 0.868 - 0.868 - - - - - - - RAB8B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-070620-16]
97. tert ENSDARG00000042637 463 0.868 - 0.868 - - - - - - - telomerase reverse transcriptase [Source:ZFIN;Acc:ZDB-GENE-080405-1]
98. znf740 znf740 2458 0.868 - 0.868 - - - - - - -
99. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 0.868 - 0.868 - - - - - - - carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
100. prkcea ENSDARG00000003008 1118 0.868 - 0.868 - - - - - - - protein kinase C, epsilon a [Source:ZFIN;Acc:ZDB-GENE-030131-8191]

There are 608 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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