Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nif3l1

Gene Name Gene ID Reads Annotation
nif3l1 ENSDARG00000045249 28 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]










Genes with expression patterns similar to nif3l1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nif3l1 ENSDARG00000045249 28 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
2. si:dkeyp-87a6.2 ENSDARG00000093322 18 1.993 - - - 0.993 - 1.000 - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
3. si:ch211-260m19.8 si:ch211-260m19.8 33 1.959 - - - - - 1.000 - - 0.959
4. abcc9 ENSDARG00000015985 20 1.924 0.924 - - - - 1.000 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
5. fgf20b ENSDARG00000086070 13 1.888 - - - - 0.888 1.000 - - - fibroblast growth factor 20b [Source:ZFIN;Acc:ZDB-GENE-060117-5]
6. hsd17b1 ENSDARG00000027469 11 1.885 0.972 - - - - - - - 0.913 hydroxysteroid (17-beta) dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-040901-5]
7. zgc:172121 ENSDARG00000034430, ENSDARG00000116650 81 1.871 - - - 0.987 - 0.884 - - - zgc:172121 [Source:ZFIN;Acc:ZDB-GENE-030131-9545]
8. pax5 ENSDARG00000037383 319 1.859 0.972 - - - 0.887 - - - - paired box 5 [Source:ZFIN;Acc:ZDB-GENE-001030-2]
9. zgc:152857 ENSDARG00000041034 7 1.827 - - - - - 1.000 - - 0.827 zgc:152857 [Source:ZFIN;Acc:ZDB-GENE-060929-72]
10. gc3 31 1.786 0.902 - - - - 0.884 - - - guanylyl cyclase 3, transcript variant X2
11. FP102191.1 FP102191.1 21 1.777 - 0.777 - - - 1.000 - - -
12. FDXACB1 ENSDARG00000095750 98 1.774 0.820 - - 0.954 - - - - - ferredoxin-fold anticodon binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8403]
13. slc52a3 ENSDARG00000042737 67 1.741 - - 0.776 0.965 - - - - - solute carrier family 52 (riboflavin transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-060421-4490]
14. CABZ01071909.3 CABZ01071909.3 14 1.708 - - - - - 1.000 - - 0.708
15. METTL12 METTL12 415 1.706 - 0.754 - 0.952 - - - - -
16. si:dkey-15h8.6 si:dkey-15h8.6 13 1.694 - 0.777 - - 0.917 - - - -
17. mirlet7i 192 1.678 - 0.815 - 0.863 - - - - - microRNA let-7i
18. si:dkey-32m20.1 43 1.671 0.732 - - - - 0.939 - - - si:dkey-32m20.1
19. zgc:174315 ENSDARG00000079222 180 1.663 0.770 - - 0.893 - - - - - zgc:174315 [Source:ZFIN;Acc:ZDB-GENE-080219-29]
20. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1.654 0.763 - 0.891 - - - - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
21. CT583679.2 CT583679.2 10 1.646 - - 0.851 - - - - 0.795 -
22. smtna ENSDARG00000074652 6 1.641 0.902 - - - 0.739 - - - - smoothelin a [Source:ZFIN;Acc:ZDB-GENE-091204-245]
23. TIMP4 TIMP4 599 1.622 0.920 0.702 - - - - - - -
24. hhat ENSDARG00000074428 8 1.618 - - 0.872 - - - - 0.746 - hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
25. iscub ENSDARG00000026582, ENSDARG00000115112 147 1.594 - - - 0.871 - 0.723 - - - iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
26. col9a3 ENSDARG00000037845 6564 1.564 - 0.825 - 0.739 - - - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
27. CMKLR1 ENSDARG00000090890 36 1.556 - - - - 0.746 0.810 - - - chemokine-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-060526-126]
28. klhl38 klhl38 44 1.54 0.735 0.805 - - - - - - -
29. mtpap ENSDARG00000076155, ENSDARG00000112828 272 1.539 - 0.805 - - - 0.734 - - - mitochondrial poly(A) polymerase [Source:ZFIN;Acc:ZDB-GENE-101208-3]
30. fastkd3 ENSDARG00000100440 144 1.514 0.709 0.805 - - - - - - - FAST kinase domains 3 [Source:ZFIN;Acc:ZDB-GENE-050208-273]
31. ptchd4 ENSDARG00000008249 17 1.51 - - - - 0.751 0.759 - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
32. mmp17b ENSDARG00000102956 249 1.496 - 0.756 - - - 0.740 - - - matrix metallopeptidase 17b [Source:ZFIN;Acc:ZDB-GENE-081107-17]
33. SDR42E2 ENSDARG00000059914 132 1.487 0.758 0.729 - - - - - - - short chain dehydrogenase/reductase family 42E, member 2 [Source:ZFIN;Acc:ZDB-GENE-101203-3]
34. mipep ENSDARG00000055344 63 1.473 0.748 0.725 - - - - - - - mitochondrial intermediate peptidase [Source:ZFIN;Acc:ZDB-GENE-060503-662]
35. cand2 ENSDARG00000005749, ENSDARG00000109268, ENSDARG00000112192 356 1.456 0.753 0.703 - - - - - - - cullin-associated and neddylation-dissociated 2 (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-645]
36. eng1b eng1b 2544 1.428 0.707 0.721 - - - - - - -
37. rspo3 ENSDARG00000070081 4 1 - - - - - 1.000 - - - R-spondin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9814]
38. LRTM1 ENSDARG00000098742 21 1 - - - - - 1.000 - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
39. btr20 ENSDARG00000102992 4 1 - - - - - 1.000 - - - bloodthirsty-related gene family, member 20 [Source:ZFIN;Acc:ZDB-GENE-060421-3419]
40. atg9b ENSDARG00000055292 155 1 - - - - - 1.000 - - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
41. isl1l ENSDARG00000021055, ENSDARG00000110204 4 1 - - - - - 1.000 - - - islet1, like [Source:ZFIN;Acc:ZDB-GENE-040624-1]
42. cx45.6 cx45.6 26 1 - - - - - 1.000 - - -
43. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - - - 1.000 - - -
44. si:dkeyp-73d8.8 ENSDARG00000094045 17 1 - - - - - 1.000 - - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
45. zgc:172051 ENSDARG00000086569 12 1 - - - - - 1.000 - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
46. TTC34 ENSDARG00000091221 3 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 34 [Source:ZFIN;Acc:ZDB-GENE-140106-266]
47. DNAJC11 1 1 - - - - - 1.000 - - - DnaJ heat shock protein family (Hsp40) member C11
48. si:rp71-26b20.1 si:rp71-26b20.1 11 1 - - - - - 1.000 - - -
49. TRIM14_5 TRIM14_5 2 1 - - - - - 1.000 - - -
50. irg1 22 1 - - - - - 1.000 - - - immunoresponsive 1 homolog (mouse)
51. si:ch211-212b13.1 si:ch211-212b13.1 1 1 - - - - - 1.000 - - -
52. SPP2 ENSDARG00000095590 5 1 - - - - - 1.000 - - - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]
53. adra1bb ENSDARG00000041173, ENSDARG00000116032 5 1 - - - - - 1.000 - - - adrenoceptor alpha 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-51]
54. CABZ01081748.1 ENSDARG00000102139 31 1 - - - - - 1.000 - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
55. sts ENSDARG00000053241 10 1 - - - - - 1.000 - - - steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
56. ucn3l ENSDARG00000087241 29 1 - - - - - 1.000 - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
57. si:ch211-66k16.28 ENSDARG00000088423 80 1 - - - - - 1.000 - - - si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]
58. cnga3b ENSDARG00000012297 2 1 - - - - - 1.000 - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
59. MPP3 MPP3 13 1 - - - - - 1.000 - - -
60. si:dkey-15h8.1 si:dkey-15h8.1 17 1 - - - - - 1.000 - - -
61. ATP9A ENSDARG00000115869 9 1 1.000 - - - - - - - - ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
62. grifin ENSDARG00000033382 141 1 - - - - - 1.000 - - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
63. BX005472.1 BX005472.1 2 1 - - - - - 1.000 - - -
64. si:ch1073-418f12.2 si:ch1073-418f12.2 15 1 - - - - - 1.000 - - -
65. fndc7 fndc7 3 1 - - - - - 1.000 - - -
66. crfb4 ENSDARG00000068711 51 1 - - - - - 1.000 - - - cytokine receptor family member b4 [Source:ZFIN;Acc:ZDB-GENE-070905-3]
67. si:ch211-203k16.3 ENSDARG00000069305 21 1 - - - - - 1.000 - - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
68. CDH24_1 CDH24_1 7 1 - - - - - 1.000 - - -
69. cabp2a ENSDARG00000052016 19 1 - - - - - 1.000 - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
70. CU929052.1 CU929052.1 642 1 - - - - - 1.000 - - -
71. ftr54 ENSDARG00000043850 3 1 - - - - - 1.000 - - - finTRIM family, member 54 [Source:ZFIN;Acc:ZDB-GENE-070620-19]
72. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 - - - - - 1.000 - - -
73. unc13ba ENSDARG00000017391 1 1 - - - - - 1.000 - - - unc-13 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-100921-10]
74. CU695221.1 CU695221.1 1 1 - - - - - 1.000 - - -
75. CABZ01078314.1 CABZ01078314.1 44 1 - - - - - 1.000 - - -
76. BX323819.1 BX323819.1 9 1 - - - - - 1.000 - - -
77. OCEL1 OCEL1 27 1 - - - - - 1.000 - - -
78. pdcl ENSDARG00000009480 12 1 - - - - - 1.000 - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
79. si:ch211-30g3.6 si:ch211-30g3.6 1 1 - - - - - 1.000 - - -
80. ETS1 ENSDARG00000024431 6 1 - - - - - 1.000 - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
81. CABZ01117474.1 CABZ01117474.1 2 1 - - - - - 1.000 - - -
82. ctssa ctssa 24 1 - - - - - 1.000 - - -
83. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1 - - - - - 1.000 - - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
84. si:ch211-30g3.8 si:ch211-30g3.8 10 1 - - - - - 1.000 - - -
85. ARHGEF40 ENSDARG00000078979 25 1 - - - - - 1.000 - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
86. CU571315.2 ENSDARG00000101956 15 1 - - - - - 1.000 - - -
87. tmem119a ENSDARG00000095259 1 1 - - - - - 1.000 - - - transmembrane protein 119a [Source:ZFIN;Acc:ZDB-GENE-060526-69]
88. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - - 1.000 - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
89. zgc:171759_6 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 15 1 - - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
90. CU457778.1 ENSDARG00000098976 38 1 - - - - - 1.000 - - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
91. ENDOD1_6 ENDOD1_6 2 1 - - - - - 1.000 - - -
92. slc15a1b ENSDARG00000044528 6 1 - - - - - 1.000 - - - solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
93. taar14f ENSDARG00000088859, ENSDARG00000114926 1 1 - - - - - 1.000 - - - trace amine associated receptor 14f [Source:ZFIN;Acc:ZDB-GENE-041210-313]
94. ZNF512B ENSDARG00000071055 7 1 - - - - - 1.000 - - - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
95. rhcgl1 ENSDARG00000007080, ENSDARG00000111618 28 1 - - - - - 1.000 - - - Rh family, C glycoprotein, like 1 [Source:ZFIN;Acc:ZDB-GENE-060209-2]
96. PKDCC PKDCC 14 1 - - - - - 1.000 - - -
97. xrra1 ENSDARG00000089578 18 1 - - - - - 1.000 - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
98. MAP4K2 ENSDARG00000001234 39 1 - - - - - 1.000 - - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-163]
99. NUMA1 141 1 - - - - - 1.000 - - - nuclear mitotic apparatus protein 1, transcript variant X2
100. kcnj8 ENSDARG00000045589 92 1 1.000 - - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 8 [Source:ZFIN;Acc:ZDB-GENE-060308-1]

There are 1062 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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