Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nif3l1

Gene Name Gene ID Reads Annotation
nif3l1 ENSDARG00000045249 28 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]










Genes with expression patterns similar to nif3l1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nif3l1 ENSDARG00000045249 28 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
2. si:dkeyp-87a6.2 ENSDARG00000093322 18 1.993 - - - 0.993 - 1.000 - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
3. si:ch211-260m19.8 si:ch211-260m19.8 33 1.959 - - - - - 1.000 - - 0.959
4. abcc9 ENSDARG00000015985 20 1.924 0.924 - - - - 1.000 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
5. fgf20b ENSDARG00000086070 13 1.888 - - - - 0.888 1.000 - - - fibroblast growth factor 20b [Source:ZFIN;Acc:ZDB-GENE-060117-5]
6. hsd17b1 ENSDARG00000027469 11 1.885 0.972 - - - - - - - 0.913 hydroxysteroid (17-beta) dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-040901-5]
7. zgc:172121 ENSDARG00000034430, ENSDARG00000116650 81 1.871 - - - 0.987 - 0.884 - - - zgc:172121 [Source:ZFIN;Acc:ZDB-GENE-030131-9545]
8. pax5 ENSDARG00000037383 319 1.859 0.972 - - - 0.887 - - - - paired box 5 [Source:ZFIN;Acc:ZDB-GENE-001030-2]
9. zgc:152857 ENSDARG00000041034 7 1.827 - - - - - 1.000 - - 0.827 zgc:152857 [Source:ZFIN;Acc:ZDB-GENE-060929-72]
10. gc3 31 1.786 0.902 - - - - 0.884 - - - guanylyl cyclase 3, transcript variant X2
11. FP102191.1 FP102191.1 21 1.777 - 0.777 - - - 1.000 - - -
12. FDXACB1 ENSDARG00000095750 98 1.774 0.820 - - 0.954 - - - - - ferredoxin-fold anticodon binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8403]
13. slc52a3 ENSDARG00000042737 67 1.741 - - 0.776 0.965 - - - - - solute carrier family 52 (riboflavin transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-060421-4490]
14. CABZ01071909.3 CABZ01071909.3 14 1.708 - - - - - 1.000 - - 0.708
15. METTL12 METTL12 415 1.706 - 0.754 - 0.952 - - - - -
16. si:dkey-15h8.6 si:dkey-15h8.6 13 1.694 - 0.777 - - 0.917 - - - -
17. mirlet7i 192 1.678 - 0.815 - 0.863 - - - - - microRNA let-7i
18. si:dkey-32m20.1 43 1.671 0.732 - - - - 0.939 - - - si:dkey-32m20.1
19. zgc:174315 ENSDARG00000079222 180 1.663 0.770 - - 0.893 - - - - - zgc:174315 [Source:ZFIN;Acc:ZDB-GENE-080219-29]
20. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1.654 0.763 - 0.891 - - - - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
21. CT583679.2 CT583679.2 10 1.646 - - 0.851 - - - - 0.795 -
22. smtna ENSDARG00000074652 6 1.641 0.902 - - - 0.739 - - - - smoothelin a [Source:ZFIN;Acc:ZDB-GENE-091204-245]
23. TIMP4 TIMP4 599 1.622 0.920 0.702 - - - - - - -
24. hhat ENSDARG00000074428 8 1.618 - - 0.872 - - - - 0.746 - hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
25. iscub ENSDARG00000026582, ENSDARG00000115112 147 1.594 - - - 0.871 - 0.723 - - - iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
26. col9a3 ENSDARG00000037845 6564 1.564 - 0.825 - 0.739 - - - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
27. CMKLR1 ENSDARG00000090890 36 1.556 - - - - 0.746 0.810 - - - chemokine-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-060526-126]
28. klhl38 klhl38 44 1.54 0.735 0.805 - - - - - - -
29. mtpap ENSDARG00000076155, ENSDARG00000112828 272 1.539 - 0.805 - - - 0.734 - - - mitochondrial poly(A) polymerase [Source:ZFIN;Acc:ZDB-GENE-101208-3]
30. fastkd3 ENSDARG00000100440 144 1.514 0.709 0.805 - - - - - - - FAST kinase domains 3 [Source:ZFIN;Acc:ZDB-GENE-050208-273]
31. ptchd4 ENSDARG00000008249 17 1.51 - - - - 0.751 0.759 - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
32. mmp17b ENSDARG00000102956 249 1.496 - 0.756 - - - 0.740 - - - matrix metallopeptidase 17b [Source:ZFIN;Acc:ZDB-GENE-081107-17]
33. SDR42E2 ENSDARG00000059914 132 1.487 0.758 0.729 - - - - - - - short chain dehydrogenase/reductase family 42E, member 2 [Source:ZFIN;Acc:ZDB-GENE-101203-3]
34. mipep ENSDARG00000055344 63 1.473 0.748 0.725 - - - - - - - mitochondrial intermediate peptidase [Source:ZFIN;Acc:ZDB-GENE-060503-662]
35. cand2 ENSDARG00000005749, ENSDARG00000109268, ENSDARG00000112192 356 1.456 0.753 0.703 - - - - - - - cullin-associated and neddylation-dissociated 2 (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-645]
36. eng1b eng1b 2544 1.428 0.707 0.721 - - - - - - -
37. zgc:172051 ENSDARG00000086569 12 1 - - - - - 1.000 - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
38. si:dkey-20f20.3 si:dkey-20f20.3 7 1 - - - - - 1.000 - - -
39. si:ch211-239j9.1 ENSDARG00000096319 27 1 - - - - - 1.000 - - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
40. cnga3b ENSDARG00000012297 2 1 - - - - - 1.000 - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
41. CU469532.1 CU469532.1 31 1 - - - - - 1.000 - - -
42. si:dkeyp-73d8.8 ENSDARG00000094045 17 1 - - - - - 1.000 - - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
43. zgc:110782 ENSDARG00000044544 48 1 - - - - - 1.000 - - - zgc:110782 [Source:ZFIN;Acc:ZDB-GENE-050320-51]
44. isl1l ENSDARG00000021055, ENSDARG00000110204 4 1 - - - - - 1.000 - - - islet1, like [Source:ZFIN;Acc:ZDB-GENE-040624-1]
45. si:rp71-26b20.1 si:rp71-26b20.1 11 1 - - - - - 1.000 - - -
46. BX005472.1 BX005472.1 2 1 - - - - - 1.000 - - -
47. cx45.6 cx45.6 26 1 - - - - - 1.000 - - -
48. CU695221.1 CU695221.1 1 1 - - - - - 1.000 - - -
49. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - - - 1.000 - - -
50. CABZ01081748.1 ENSDARG00000102139 31 1 - - - - - 1.000 - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
51. si:dkey-20j3.4 si:dkey-20j3.4 4 1 - - - - - 1.000 - - -
52. BX323793.1 ENSDARG00000104134 24 1 - - - - - 1.000 - - - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
53. slc15a1b ENSDARG00000044528 6 1 - - - - - 1.000 - - - solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
54. BICD2_1 BICD2_1 18 1 - - - - - 1.000 - - -
55. glulc ENSDARG00000013227 6 1 - - - - - 1.000 - - - glutamate-ammonia ligase (glutamine synthase) c [Source:ZFIN;Acc:ZDB-GENE-060929-540]
56. or126-7 ENSDARG00000058724 1 1 - - - - - 1.000 - - - odorant receptor, family E, subfamily 126, member 7 [Source:ZFIN;Acc:ZDB-GENE-070806-104]
57. CABZ01117474.1 CABZ01117474.1 2 1 - - - - - 1.000 - - -
58. si:ch211-30g3.8 si:ch211-30g3.8 10 1 - - - - - 1.000 - - -
59. clrn1 ENSDARG00000102890 5 1 - - - - - 1.000 - - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
60. CU571315.2 ENSDARG00000101956 15 1 - - - - - 1.000 - - -
61. ENSDARG00000032477 ENSDARG00000032477 18 1 - - - - - 1.000 - - -
62. gucy2f ENSDARG00000025504 6 1 - - - - - 1.000 - - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
63. BX927308.3 BX927308.3 126 1 - - - - - 1.000 - - -
64. AL954173.3 AL954173.3 1 1 - - - - - 1.000 - - -
65. MPP3 MPP3 13 1 - - - - - 1.000 - - -
66. otx1a 1607 1 - - - - - 1.000 - - - orthodenticle homeobox 1a
67. BX927369.1 ENSDARG00000105047 21 1 - - - - - 1.000 - - -
68. btr20 ENSDARG00000102992 4 1 - - - - - 1.000 - - - bloodthirsty-related gene family, member 20 [Source:ZFIN;Acc:ZDB-GENE-060421-3419]
69. PKDCC PKDCC 14 1 - - - - - 1.000 - - -
70. ARHGEF40 ENSDARG00000078979 25 1 - - - - - 1.000 - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
71. si:ch211-203k16.3 ENSDARG00000069305 21 1 - - - - - 1.000 - - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
72. NARS2 ENSDARG00000098441 57 1 - - - - - 1.000 - - - asparaginyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-596]
73. fndc7 fndc7 3 1 - - - - - 1.000 - - -
74. si:ch1073-418f12.2 si:ch1073-418f12.2 15 1 - - - - - 1.000 - - -
75. CABZ01078314.1 CABZ01078314.1 44 1 - - - - - 1.000 - - -
76. myo7ab ENSDARG00000044632 1 1 - - - - - 1.000 - - - myosin VIIAb [Source:ZFIN;Acc:ZDB-GENE-091110-4]
77. BX000363.2 ENSDARG00000109527 1 1 - - - - - 1.000 - - -
78. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1 - - - - - 1.000 - - -
79. epha6 ENSDARG00000022971 52 1 1.000 - - - - - - - - eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
80. muc13b ENSDARG00000079647 67 1 - - - - - 1.000 - - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
81. CDH24_1 CDH24_1 7 1 - - - - - 1.000 - - -
82. chpfb ENSDARG00000078037 30 1 - - - - - 1.000 - - - chondroitin polymerizing factor b [Source:ZFIN;Acc:ZDB-GENE-100504-1]
83. U1_17 U1_17 1 1 - - - - - 1.000 - - -
84. si:ch211-30g3.6 si:ch211-30g3.6 1 1 - - - - - 1.000 - - -
85. ptger2a ENSDARG00000011434 6 1 - - - - - 1.000 - - - prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
86. AKNA_1 AKNA_1 2 1 - - - - - 1.000 - - -
87. DNAH10 ENSDARG00000061486 29 1 - - - - - 1.000 - - - dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
88. CU929052.1 CU929052.1 642 1 - - - - - 1.000 - - -
89. ftr54 ENSDARG00000043850 3 1 - - - - - 1.000 - - - finTRIM family, member 54 [Source:ZFIN;Acc:ZDB-GENE-070620-19]
90. si:ch211-212b13.1 si:ch211-212b13.1 1 1 - - - - - 1.000 - - -
91. crfb4 ENSDARG00000068711 51 1 - - - - - 1.000 - - - cytokine receptor family member b4 [Source:ZFIN;Acc:ZDB-GENE-070905-3]
92. si:dkey-14o1.18 si:dkey-14o1.18 23 1 - - - - - 1.000 - - -
93. OCEL1 OCEL1 27 1 - - - - - 1.000 - - -
94. BX323819.1 BX323819.1 9 1 - - - - - 1.000 - - -
95. cabp2a ENSDARG00000052016 19 1 - - - - - 1.000 - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
96. ETS1 ENSDARG00000024431 6 1 - - - - - 1.000 - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
97. MCOLN2 ENSDARG00000098918 12 1 - - - - - 1.000 - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
98. atg9b ENSDARG00000055292 155 1 - - - - - 1.000 - - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
99. pdcl ENSDARG00000009480 12 1 - - - - - 1.000 - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
100. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 - - - - - 1.000 - - -

There are 1062 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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