Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nid2b

Gene Name Gene ID Reads Annotation
nid2b ENSDARG00000009471 4 nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]










Genes with expression patterns similar to nid2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nid2b ENSDARG00000009471 4 6 - 1.000 1.000 1.000 1.000 1.000 1.000 - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
2. n6amt2 7 2.753 - 1.000 - - 0.753 - 1.000 - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
3. dmrt1 ENSDARG00000007349 16 2.711 - 1.000 - 0.869 - - 0.842 - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
4. HYKK_1 HYKK_1 4 2 - 1.000 - - - - 1.000 - -
5. asic4a ENSDARG00000025162 25 2 - - - - 1.000 1.000 - - - acid-sensing (proton-gated) ion channel family member 4a [Source:ZFIN;Acc:ZDB-GENE-040513-5]
6. ca10b ENSDARG00000009568 8 2 - 1.000 - - 1.000 - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
7. LRRK1_1 LRRK1_1 11 2 - 1.000 - - - 1.000 - - -
8. rrh ENSDARG00000039534 4 2 - - - - 1.000 1.000 - - - retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
9. CU457778.1 ENSDARG00000098976 38 2 - 1.000 - - - - 1.000 - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
10. uts2a ENSDARG00000053854, ENSDARG00000116102 16 2 - - - - - 1.000 1.000 - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
11. si:ch211-108c6.2 14 2 - 1.000 - - - 1.000 - - - si:ch211-108c6.2
12. BX927122.3 BX927122.3 19 2 - 1.000 - - - 1.000 - - -
13. gpc2 ENSDARG00000104217 10 2 - 1.000 - - 1.000 - - - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
14. PCDH10 PCDH10 7 2 - 1.000 - - - 1.000 - - -
15. si:ch211-243a22.1 si:ch211-243a22.1 42 2 - 1.000 - - - 1.000 - - -
16. GABRA3 ENSDARG00000090883 5 2 - 1.000 - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
17. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 2 - - - - - 1.000 1.000 - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
18. BX548011.3 ENSDARG00000113526 2 2 - - - - 1.000 - 1.000 - -
19. si:ch211-120c15.1 si:ch211-120c15.1 20 2 - 1.000 - - - - 1.000 - -
20. BX470224.1 ENSDARG00000092793 22 2 - - - - 1.000 - 1.000 - -
21. nphs1 ENSDARG00000060758 5 2 - - - - 1.000 - 1.000 - - nephrosis 1, congenital, Finnish type (nephrin) [Source:ZFIN;Acc:ZDB-GENE-051102-1]
22. FAM13C FAM13C 1 2 - - - - 1.000 1.000 - - -
23. zgc:165409_1 ENSDARG00000091385 65 1.987 - 1.000 - - - - 0.987 - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
24. fermt3a fermt3a 56 1.962 - 1.000 - - - - 0.962 - -
25. serpine3 ENSDARG00000057108 49 1.952 - - - - - 1.000 0.952 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
26. mettl25 ENSDARG00000045754 36 1.916 - 1.000 - - - - 0.916 - - methyltransferase like 25 [Source:ZFIN;Acc:ZDB-GENE-041210-90]
27. slc1a9 ENSDARG00000098269 12 1.916 - 1.000 - - - - 0.916 - - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
28. ZP2_2 ZP2_2 28 1.91 - - - - - 1.000 0.910 - -
29. pik3ap1 ENSDARG00000078285 23 1.908 - - - - - 1.000 0.908 - - phosphoinositide-3-kinase adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-250]
30. CR356223.4 CR356223.4 42 1.888 - - - - - 1.000 0.888 - -
31. gyg2 ENSDARG00000033380 12 1.88 - - - 0.880 - 1.000 - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
32. bbs5 ENSDARG00000039827 211 1.879 - - - - - 1.000 0.879 - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
33. efr3a ENSDARG00000005163, ENSDARG00000115083 7 1.875 - - 0.875 - - 1.000 - - - EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
34. FAM185A ENSDARG00000019142 3 1.869 - - - 0.869 1.000 - - - - family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
35. si:ch211-196c10.5 si:ch211-196c10.5 3 1.869 - - - 0.869 - 1.000 - - -
36. pole2 ENSDARG00000100028 42 1.851 - - - - - 1.000 0.851 - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
37. lifra ENSDARG00000098857 11 1.838 - - - - 1.000 - 0.838 - - leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
38. st8sia1 ENSDARG00000098221 34 1.829 - - - - - 1.000 0.829 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
39. LYPLAL1 ENSDARG00000088764 87 1.812 - 0.865 - - - - 0.947 - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
40. SYNGAP1_1 SYNGAP1_1 66 1.777 - - 0.813 - - - 0.964 - -
41. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1.771 - 1.000 - - - 0.771 - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
42. AL954676.2 AL954676.2 50 1.766 - 1.000 - 0.766 - - - - -
43. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.754 - 1.000 - - - 0.754 - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
44. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 1.754 - 1.000 - - - - 0.754 - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
45. si:dkey-208k4.10 si:dkey-208k4.10 1 1.753 - - - - 0.753 1.000 - - -
46. lrrc18b ENSDARG00000076236 5 1.729 - 1.000 0.729 - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
47. si:dkey-3n22.9 ENSDARG00000096273 1 1.729 - 1.000 0.729 - - - - - - si:dkey-3n22.9 [Source:ZFIN;Acc:ZDB-GENE-120215-95]
48. asip asip 2 1.729 - - 0.729 - - 1.000 - - -
49. lpar5b ENSDARG00000068638 2 1.729 - - 0.729 - - 1.000 - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
50. phlpp2 ENSDARG00000090255 1 1.729 - - 0.729 - - 1.000 - - - PH domain and leucine rich repeat protein phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-070719-3]
51. zgc:113516 20 1.729 - - 0.729 - - 1.000 - - - zgc:113516
52. CABZ01015475.1 ENSDARG00000104841 6 1.729 - - 0.729 - - 1.000 - - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
53. CABZ01112732.1 ENSDARG00000068453 4 1.729 - - 0.729 - - 1.000 - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
54. SMARCA4 ENSDARG00000104339 48 1.717 - 1.000 - - - 0.717 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
55. CU915778.2 CU915778.2 194 1.704 - 0.880 - - - - 0.824 - -
56. pycr1 pycr1 1258 1.702 - 1.000 - - - - 0.702 - -
57. dnaaf1 ENSDARG00000012030 58 1.665 - - - - - 0.749 0.916 - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
58. oca2 ENSDARG00000061303 22 1.654 - - 0.875 0.779 - - - - - oculocutaneous albinism II [Source:ZFIN;Acc:ZDB-GENE-070718-4]
59. CDC42EP1 CDC42EP1 50 1.642 - - - - - 0.822 0.820 - -
60. FAM120A ENSDARG00000075021 73 1.642 - 0.726 - - - - 0.916 - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
61. dazl ENSDARG00000036214 11 1.638 - - - 0.705 - - 0.933 - - deleted in azoospermia-like [Source:ZFIN;Acc:ZDB-GENE-000405-6]
62. lrrc30 lrrc30 40 1.633 - - - - - 0.749 0.884 - -
63. iqce ENSDARG00000089930 163 1.627 - - - - - 0.764 0.863 - - IQ motif containing E [Source:ZFIN;Acc:ZDB-GENE-090312-217]
64. si:dkey-14d8.9 si:dkey-14d8.9 66 1.614 - 0.771 - - - - 0.843 - -
65. xkr7 ENSDARG00000026333 18 1.604 - 0.875 0.729 - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
66. pax7b ENSDARG00000070818 282 1.601 - 0.866 - - - 0.735 - - - paired box 7b [Source:ZFIN;Acc:ZDB-GENE-080917-54]
67. AGAP2 ENSDARG00000099874 151 1.594 - - - 0.767 - 0.827 - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 [Source:ZFIN;Acc:ZDB-GENE-061103-343]
68. RNF14 ENSDARG00000043905 41 1.587 - - - - - 0.749 0.838 - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
69. BX248324.1 ENSDARG00000096489 3 1.535 - - 0.729 - 0.806 - - - -
70. BX324131.3 BX324131.3 278 1.532 - 0.760 - - - 0.772 - - -
71. Mar-04 Mar-04 21 1.5 - - 0.729 - - 0.771 - - -
72. supt3h ENSDARG00000098141 18 1 - 1.000 - - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
73. CU457778.2 ENSDARG00000109381 2 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100329258]
74. si:dkey-248g17.3 si:dkey-248g17.3 34 1 - - - - - 1.000 - - -
75. CABZ01079192.1 ENSDARG00000101629 23 1 - 1.000 - - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
76. HIST1H4L ENSDARG00000101249, ENSDARG00000105318, ENSDARG00000105352, ENSDARG00000105353, ENSDARG00000105376, ENSDARG00000105382, ENSDARG00000105409, ENSDARG00000105482, ENSDARG00000110035, ENSDARG00000110152, ENSDARG00000110812, ENSDARG00000111165, ENSDARG00000111247, ENSDARG00000111494, ENSDARG00000111501, ENSDARG00000111619, ENSDARG00000111753, ENSDARG00000112491, ENSDARG00000112528, ENSDARG00000112954, ENSDARG00000114534, ENSDARG00000115054, ENSDARG00000115281, ENSDARG00000115799, ENSDARG00000116781 3 1 - - - - 1.000 - - - - histone 1, H4, like [Source:ZFIN;Acc:ZDB-GENE-070927-10]
77. si:dkey-165b20.3 ENSDARG00000099544 6 1 - 1.000 - - - - - - - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
78. itih6 ENSDARG00000056037 3 1 - 1.000 - - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
79. sycp2 ENSDARG00000088950 3 1 - 1.000 - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
80. zgc:152968 ENSDARG00000037002 6 1 - 1.000 - - - - - - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
81. cdh18 cdh18 64 1 - 1.000 - - - - - - -
82. si:dkey-47k20.7 ENSDARG00000056014 1 1 - - - - - 1.000 - - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
83. si:dkey-225k4.1 ENSDARG00000092045 47 1 - 1.000 - - - - - - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
84. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - 1.000 - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
85. ZNF135_2 ZNF135_2 27 1 - 1.000 - - - - - - -
86. LRG1 LRG1 304 1 - 1.000 - - - - - - -
87. hif1al2 ENSDARG00000044550 140 1 - - - - - 1.000 - - - hypoxia inducible factor 1 subunit alpha, like 2 [Source:ZFIN;Acc:ZDB-GENE-050211-2]
88. si:dkeyp-106c3.1 ENSDARG00000090623 225 1 - 1.000 - - - - - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
89. nitr3a_1 ENSDARG00000110676 44 1 - - - - - 1.000 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
90. tcf23 ENSDARG00000087381 6 1 - - - - - - 1.000 - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
91. FAIM2 FAIM2 43 1 - 1.000 - - - - - - -
92. DOCK4 DOCK4 78 1 - 1.000 - - - - - - -
93. vip ENSDARG00000078247 10 1 - 1.000 - - - - - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
94. ifnphi1 ENSDARG00000025607 6 1 - 1.000 - - - - - - - interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
95. cyp2p9 ENSDARG00000022631 1 1 - - - - 1.000 - - - - cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
96. si:dkeyp-59a8.1 si:dkeyp-59a8.1 6 1 - 1.000 - - - - - - -
97. CU633740.2 CU633740.2 16 1 - - - - - 1.000 - - -
98. si:dkey-40n15.1 ENSDARG00000116117 1 1 - - - - - 1.000 - - - si:dkey-40n15.1 [Source:ZFIN;Acc:ZDB-GENE-110914-64]
99. pla2g4a pla2g4a 7 1 - - - - 1.000 - - - -
100. grin2bb ENSDARG00000030376 60 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-061207-27]

There are 1436 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA