Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nhej1

Gene Name Gene ID Reads Annotation
nhej1 ENSDARG00000058893 172 nonhomologous end-joining factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2515]










Genes with expression patterns similar to nhej1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nhej1 ENSDARG00000058893 172 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nonhomologous end-joining factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2515]
2. ralgps1 ENSDARG00000068370 39 1.832 0.868 - - - - 0.964 - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
3. wu:fi42e03 ENSDARG00000070709 276 1.82 0.872 - - - - 0.948 - - - wu:fi42e03 [Source:ZFIN;Acc:ZDB-GENE-030131-6284]
4. hbl4 ENSDARG00000054202, ENSDARG00000109644 248 1.819 - 0.857 - - - 0.962 - - - hexose-binding lectin 4 [Source:ZFIN;Acc:ZDB-GENE-070912-287]
5. syt14b ENSDARG00000001891 85 1.809 - - - - - 0.963 0.846 - - synaptotagmin XIVb [Source:ZFIN;Acc:ZDB-GENE-041014-36]
6. C12H10orf2 C12H10orf2 245 1.792 0.915 - - - - 0.877 - - -
7. TRMT10A ENSDARG00000036678 621 1.765 - 0.858 - - - 0.907 - - - tRNA methyltransferase 10A [Source:ZFIN;Acc:ZDB-GENE-130530-594]
8. si:ch1073-228j22.1 ENSDARG00000095799 98 1.759 - 0.817 - - - 0.942 - - - si:ch1073-228j22.1 [Source:ZFIN;Acc:ZDB-GENE-110411-219]
9. si:dkey-178e17.3 ENSDARG00000058658 271 1.752 - - - - - - 0.869 0.883 - si:dkey-178e17.3 [Source:ZFIN;Acc:ZDB-GENE-081104-335]
10. si:dkey-152b24.7 ENSDARG00000099715 26 1.745 0.858 - - - - - - 0.887 - si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
11. ATP10B ENSDARG00000076230 989 1.734 - - - - 0.779 0.955 - - - ATPase phospholipid transporting 10B [Source:ZFIN;Acc:ZDB-GENE-130530-796]
12. dhrs11b ENSDARG00000031299 409 1.721 - 0.864 - - - - - 0.857 - dehydrogenase/reductase (SDR family) member 11b [Source:ZFIN;Acc:ZDB-GENE-040625-155]
13. si:dkey-61l1.4 ENSDARG00000092567 1012 1.72 - 0.911 - - - 0.809 - - - si:dkey-61l1.4 [Source:ZFIN;Acc:ZDB-GENE-070705-483]
14. cep104 ENSDARG00000060361 303 1.72 - - - - - 0.881 - 0.839 - centrosomal protein 104 [Source:ZFIN;Acc:ZDB-GENE-060503-195]
15. pgm3 ENSDARG00000024654 366 1.704 0.788 - - - - 0.916 - - - phosphoglucomutase 3 [Source:ZFIN;Acc:ZDB-GENE-041024-13]
16. SETDB2 ENSDARG00000101462 249 1.704 - - - - - 0.848 - 0.856 - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
17. pphln1 ENSDARG00000045692 1023 1.697 - 0.834 - - - - - 0.863 - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
18. tmprss13a ENSDARG00000100969 84 1.686 - 0.827 - - - 0.859 - - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
19. mak ENSDARG00000059287 144 1.685 - 0.882 - - - - - 0.803 - male germ cell-associated kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7279]
20. zgc:158868 ENSDARG00000069379, ENSDARG00000116578 121 1.675 0.740 - - - - 0.935 - - - zgc:158868 [Source:ZFIN;Acc:ZDB-GENE-070112-892]
21. aspscr1 ENSDARG00000105321 595 1.672 - 0.828 - - - 0.844 - - - alveolar soft part sarcoma chromosome region, candidate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-31]
22. cdx1a ENSDARG00000114554 28 1.671 - 0.812 - - 0.859 - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
23. CABZ01074081.1 CABZ01074081.1 109 1.666 - 0.718 - - - 0.948 - - -
24. brap ENSDARG00000008560 821 1.666 - - - - - 0.848 0.818 - - BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
25. SEMA6B_1 SEMA6B_1 430 1.653 - 0.755 - - - 0.898 - - -
26. slc35e3 ENSDARG00000045493, ENSDARG00000114987 1110 1.65 - 0.741 - - - 0.909 - - - solute carrier family 35, member E3 [Source:ZFIN;Acc:ZDB-GENE-041210-186]
27. plekha3 ENSDARG00000056601 213 1.646 - 0.771 - - - 0.875 - - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1252]
28. MIIP ENSDARG00000088346 382 1.645 - 0.752 - - - 0.893 - - - migration and invasion inhibitory protein [Source:ZFIN;Acc:ZDB-GENE-130620-1]
29. zgc:173548 ENSDARG00000070048 558 1.629 - 0.759 - - - 0.870 - - - zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
30. DPYD DPYD 52 1.627 0.858 - - - - - - 0.769 -
31. magoh ENSDARG00000038635, ENSDARG00000109837 2880 1.626 - 0.852 - - - 0.774 - - - mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
32. INPP5K INPP5K 137 1.62 - 0.754 - - - - 0.866 - -
33. bre bre 1233 1.619 - - - - - 0.835 - 0.784 -
34. mgme1 ENSDARG00000016656 173 1.616 0.862 - - - - - - 0.754 - mitochondrial genome maintenance exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-041212-68]
35. LPHN1 LPHN1 152 1.614 - - - - - 0.857 0.757 - -
36. ube2q1 ENSDARG00000100766 678 1.613 - - - - - 0.897 - 0.716 - ubiquitin-conjugating enzyme E2Q family member 1 [Source:ZFIN;Acc:ZDB-GENE-050522-329]
37. sdk1a ENSDARG00000078866 159 1.61 - 0.837 - - - 0.773 - - - sidekick cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-081104-374]
38. FP236168.1 FP236168.1 150 1.607 - 0.728 - - - - - 0.879 -
39. nme4 ENSDARG00000088390 87 1.604 - - - - - 0.789 0.815 - - NME/NM23 nucleoside diphosphate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1043]
40. arhgef28 ENSDARG00000060415 142 1.598 - - - - - 0.756 - 0.842 - Rho guanine nucleotide exchange factor (GEF) 28 [Source:ZFIN;Acc:ZDB-GENE-060531-28]
41. SLC35A2 ENSDARG00000058990 289 1.593 0.873 0.720 - - - - - - - solute carrier family 35 (UDP-galactose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030616-62]
42. zcchc14 ENSDARG00000101242 630 1.592 0.762 - - - - - - 0.830 - zinc finger, CCHC domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-060503-319]
43. col12a1a ENSDARG00000078322 1833 1.588 0.761 0.827 - - - - - - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
44. si:ch211-149a19.3 ENSDARG00000079456 115 1.587 0.811 - - - - - 0.776 - - si:ch211-149a19.3 [Source:ZFIN;Acc:ZDB-GENE-081104-128]
45. parvg ENSDARG00000067711 147 1.58 0.788 - - - - - - 0.792 - parvin, gamma [Source:ZFIN;Acc:ZDB-GENE-070410-67]
46. abcd3a ENSDARG00000104085, ENSDARG00000110888, ENSDARG00000116461 888 1.576 - 0.857 - - - - - 0.719 - ATP-binding cassette, sub-family D (ALD), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2868]
47. commd1 ENSDARG00000031203 340 1.572 0.802 0.770 - - - - - - - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
48. si:dkey-103i16.6 ENSDARG00000062893, ENSDARG00000116729 108 1.569 0.818 - - - - - - 0.751 - si:dkey-103i16.6 [Source:ZFIN;Acc:ZDB-GENE-061207-46]
49. nhp2l1a nhp2l1a 993 1.562 - 0.723 - - - 0.839 - - -
50. CCDC132 CCDC132 267 1.557 - 0.724 - - - 0.833 - - -
51. igf2a ENSDARG00000018643 1219 1.543 - - - - - 0.760 0.783 - - insulin-like growth factor 2a [Source:ZFIN;Acc:ZDB-GENE-991111-3]
52. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.541 0.770 - - - - 0.771 - - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
53. C18H15orf38 C18H15orf38 370 1.535 - - - - - 0.763 - 0.772 -
54. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.532 0.795 - - - - 0.737 - - - phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
55. znf800b ENSDARG00000039843 205 1.519 - - - - - 0.717 - 0.802 - zinc finger protein 800b [Source:ZFIN;Acc:ZDB-GENE-040426-1166]
56. trak1 201 1.513 0.737 - - - - 0.776 - - - trafficking protein, kinesin binding 1, transcript variant X6
57. CR318593.1 CR318593.1 290 1.51 0.703 0.807 - - - - - - -
58. fdx1l 461 1.503 - 0.791 - - - - 0.712 - - ferredoxin 1-like
59. mogat3b ENSDARG00000003635 394 1.477 0.706 0.771 - - - - - - - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
60. ptges ENSDARG00000020136, ENSDARG00000115727 747 1.456 - - - - - - 0.711 0.745 - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
61. pigh ENSDARG00000038348 405 1.443 - 0.741 - - - 0.702 - - - phosphatidylinositol glycan anchor biosynthesis, class H [Source:ZFIN;Acc:ZDB-GENE-040718-303]
62. GDPD2 ENSDARG00000073870 229 1.442 - 0.712 - - - - 0.730 - - glycerophosphodiester phosphodiesterase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081107-62]
63. crebbpb ENSDARG00000104148, ENSDARG00000112452 1926 1.409 - 0.701 - - - 0.708 - - - CREB binding protein b [Source:ZFIN;Acc:ZDB-GENE-050302-102]
64. ttc7a ENSDARG00000074760 39 0.981 - - - - - 0.981 - - - tetratricopeptide repeat domain 7A [Source:ZFIN;Acc:ZDB-GENE-010319-27]
65. plcd3b ENSDARG00000079572 64 0.98 - - - - - 0.980 - - - phospholipase C, delta 3b [Source:ZFIN;Acc:ZDB-GENE-081222-2]
66. lgals9l1 ENSDARG00000025903 58 0.98 - - - - - 0.980 - - - lectin, galactoside-binding, soluble, 9 (galectin 9)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9543]
67. st6galnac1.1 ENSDARG00000043814 95 0.98 - - - - - 0.980 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
68. DLEU7 DLEU7 91 0.977 - - - - - 0.977 - - -
69. BX664625.1 ENSDARG00000043131 8 0.972 - - - - - 0.972 - - - natural killer cell receptor 2B4-like [Source:NCBI gene;Acc:100007935]
70. wdfy2 ENSDARG00000040453 406 0.972 - - - - - 0.972 - - - WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
71. mfsd12a ENSDARG00000061908 68 0.97 - - - - - 0.970 - - - major facilitator superfamily domain containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-4642]
72. CT573476.1 CT573476.1 74 0.969 - - - - - 0.969 - - -
73. rttn ENSDARG00000004131 154 0.969 - - - - - 0.969 - - - rotatin [Source:ZFIN;Acc:ZDB-GENE-090609-5]
74. ftsjd1 ftsjd1 137 0.968 - - - - - 0.968 - - -
75. MPZL2 MPZL2 31 0.968 - - - - - 0.968 - - -
76. si:ch211-265g21.1 si:ch211-265g21.1 35 0.967 - - - - - 0.967 - - -
77. C16H8orf76 C16H8orf76 329 0.966 - - - - - 0.966 - - -
78. si:dkey-178o8.2 si:dkey-178o8.2 15 0.966 - - - - - 0.966 - - -
79. cry2b cry2b 517 0.966 - - - - - 0.966 - - -
80. SIGLEC15 SIGLEC15 10 0.965 - - - - - 0.965 - - -
81. dennd2db ENSDARG00000030250 24 0.965 - - - - - 0.965 - - - DENN/MADD domain containing 2Db [Source:ZFIN;Acc:ZDB-GENE-041114-34]
82. si:dkey-30j10.5 ENSDARG00000093186 13 0.965 - - - - - 0.965 - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
83. dmc1 ENSDARG00000055883, ENSDARG00000110457 5 0.965 - - - - - 0.965 - - - DNA meiotic recombinase 1 [Source:ZFIN;Acc:ZDB-GENE-060331-93]
84. cyp19a1b ENSDARG00000098360 8 0.965 - - - - - 0.965 - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
85. lyrm5b ENSDARG00000045827 91 0.962 - - - - - 0.962 - - - LYR motif containing 5b [Source:ZFIN;Acc:ZDB-GENE-070424-20]
86. ARHGEF38 ENSDARG00000079377 9 0.962 - - - - - 0.962 - - - Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
87. si:dkey-216e24.4 si:dkey-216e24.4 14 0.962 - - - - - 0.962 - - -
88. myo7bb ENSDARG00000077201 7 0.962 - - - - - 0.962 - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
89. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.962 - - - - - 0.962 - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
90. pnocb ENSDARG00000024189 18 0.962 - - - - - 0.962 - - - prepronociceptin b [Source:ZFIN;Acc:ZDB-GENE-040114-1]
91. si:dkeyp-46h3.2 ENSDARG00000092498 23 0.962 - - - - - 0.962 - - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
92. RBBP6_2 RBBP6_2 23 0.962 - - - - - 0.962 - - -
93. CR352265.1 ENSDARG00000062758 39 0.962 - - - - - 0.962 - - -
94. hnf1a ENSDARG00000009470 60 0.962 - - - - - 0.962 - - - HNF1 homeobox a [Source:ZFIN;Acc:ZDB-GENE-021206-12]
95. chia.3 ENSDARG00000009612 14 0.962 - - - - - 0.962 - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
96. zgc:154040 16 0.962 - - - - - 0.962 - - - zgc:154040
97. c1qtnf5 ENSDARG00000056134 729 0.962 - - - - - 0.962 - - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
98. CABZ01044346.1 CABZ01044346.1 12 0.962 - - - - - 0.962 - - -
99. kcnk13a ENSDARG00000008212 136 0.961 - - - - - 0.961 - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
100. dph7 ENSDARG00000062083 248 0.961 - - - - - 0.961 - - - diphthamide biosynthesis 7 [Source:ZFIN;Acc:ZDB-GENE-070410-57]

There are 1442 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA