Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nfyba

Gene Name Gene ID Reads Annotation
nfyba ENSDARG00000039185 1804 nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]










Genes with expression patterns similar to nfyba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nfyba ENSDARG00000039185 1804 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
2. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 3.099 0.788 - - - - 0.841 0.763 0.707 - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
3. hcfc1b ENSDARG00000012519 3633 2.663 - - - - 0.952 0.902 0.809 - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
4. gabpb2a ENSDARG00000007943 1570 2.61 - - - - 0.972 0.922 0.716 - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
5. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 2.597 - - - - - 0.951 0.770 0.876 - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
6. srcap ENSDARG00000005236 1740 2.568 - - - - 0.978 0.851 0.739 - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
7. stxbp1a ENSDARG00000001994 5154 2.532 - - - - 0.955 0.833 0.744 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
8. notch1b ENSDARG00000052094 7874 2.465 - - - - - 0.932 0.745 0.788 - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
9. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.444 - - - - - 0.847 0.780 0.817 - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
10. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.421 - - - - 0.963 - 0.714 0.744 - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
11. CACFD1 ENSDARG00000090818 1298 2.414 - - - - - 0.893 0.810 0.711 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
12. si:dkeyp-44a8.2 ENSDARG00000092493 8308 2.405 - 0.999 - - - - 0.704 - 0.702 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
13. flrt3 ENSDARG00000076895 3516 2.398 0.710 - - - - 0.924 - 0.764 - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
14. dpysl5a ENSDARG00000011141 1827 2.356 - - - - - 0.795 0.742 0.819 - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
15. cldn5a ENSDARG00000043716 3865 2.328 - - - - - 0.815 0.728 0.785 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
16. pcdh1gc5 ENSDARG00000104826 10052 2.288 - - - - - 0.819 0.755 0.714 - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
17. bcl11ab ENSDARG00000063153 3032 2.268 - - - 0.707 - 0.849 0.712 - - B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
18. sumo3a ENSDARG00000028119 13447 2.263 - - - - - 0.827 0.725 - 0.711 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
19. vezf1a ENSDARG00000008247 1449 2.253 - - - - - 0.803 0.745 0.705 - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
20. nova1 ENSDARG00000020178 4129 2.23 - - - - - 0.731 0.717 0.782 - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
21. smfn ENSDARG00000009806 1280 2.19 - - - - - 0.725 0.759 0.706 - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
22. BX005368.2 BX005368.2 702 1.885 - 1.000 - - - 0.885 - - -
23. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 1.874 - - - - 0.974 0.900 - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
24. slc46a1 ENSDARG00000026149 297 1.873 - - - - 0.974 0.899 - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
25. phf2 ENSDARG00000018691 3341 1.821 - - - - 0.955 0.866 - - - PHD finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-050302-10]
26. h2afy2_1 ENSDARG00000087897 9887 1.816 - 0.994 - - - 0.822 - - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
27. chd7 ENSDARG00000075211 12085 1.799 - 0.993 - - - - 0.806 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
28. pwp1 ENSDARG00000015921 1160 1.797 - 1.000 - - - - 0.797 - - PWP1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1049]
29. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 1.793 - - - - 0.945 0.848 - - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
30. sepw2a 8597 1.786 - 0.987 - - - 0.799 - - - selenoprotein W, 2a
31. DTX4 ENSDARG00000076302 2642 1.769 - - - - - 0.934 0.835 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
32. sept5b ENSDARG00000036031 188 1.766 - - - - - 0.930 0.836 - - septin 5b [Source:ZFIN;Acc:ZDB-GENE-040808-43]
33. olfm1a ENSDARG00000018270 107 1.76 - - - - - 0.931 0.829 - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
34. pkib ENSDARG00000053110 527 1.754 - - - - - 0.968 0.786 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
35. ENSDARG00000086878 ENSDARG00000086878 332 1.75 - - - - - 0.930 0.820 - -
36. ifrd1 ENSDARG00000068708 2858 1.744 - - - - 0.977 - - 0.767 - interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
37. pld3 ENSDARG00000068199 205 1.733 - - - - - 0.858 0.875 - - phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]
38. CABZ01065506.1 CABZ01065506.1 204 1.733 - - - - - 0.928 0.805 - -
39. slc44a5b ENSDARG00000057419 534 1.724 - - - - - 0.888 0.836 - - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
40. chrnb2b ENSDARG00000017790 155 1.718 - - - - - 0.933 0.785 - - cholinergic receptor, nicotinic, beta 2b [Source:ZFIN;Acc:ZDB-GENE-070821-3]
41. dnttip2 ENSDARG00000057648 2381 1.717 - - - - 0.933 - - 0.784 - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
42. LINGO2 LINGO2 300 1.71 - - - - - 0.935 0.775 - -
43. hey1 ENSDARG00000070538 986 1.708 - - - - 0.965 0.743 - - - hes-related family bHLH transcription factor with YRPW motif 1 [Source:ZFIN;Acc:ZDB-GENE-000607-70]
44. atpv0e2 ENSDARG00000059057 585 1.706 - - - - - 0.950 0.756 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
45. srsf6a ENSDARG00000013729 8576 1.706 - 0.815 - - 0.891 - - - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
46. KIF4A KIF4A 3322 1.705 - - - - 0.969 - 0.736 - -
47. syn2a ENSDARG00000045945 434 1.705 - - - - - 0.956 0.749 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
48. dctn2 ENSDARG00000031388 3825 1.704 - 0.999 - - - - - 0.705 - dynactin 2 (p50) [Source:ZFIN;Acc:ZDB-GENE-040426-1279]
49. rnd3a ENSDARG00000076799 4705 1.703 - - - - 0.966 - - 0.737 - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
50. usp7 ENSDARG00000073710 7017 1.7 - 0.998 - - 0.702 - - - - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
51. stap2a ENSDARG00000092810 591 1.699 - - - - - 0.885 - 0.814 - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
52. vldlr ENSDARG00000006257 772 1.699 - - - - 0.972 - 0.727 - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
53. ek1 ENSDARG00000020080 742 1.699 - - - - - 0.966 0.733 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
54. emp1 ENSDARG00000069632 251 1.695 - - - - - 0.902 0.793 - - epithelial membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070822-2]
55. ADAM22 ENSDARG00000060532 2259 1.694 - - - - - 0.930 0.764 - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
56. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.694 - - - - 0.973 - 0.721 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
57. TMEM57 TMEM57 260 1.693 - - - - - 0.924 0.769 - -
58. syt11a ENSDARG00000057913 1145 1.692 - - - - - 0.896 0.796 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
59. mllt10 ENSDARG00000045401 7557 1.69 - - - - 0.906 0.784 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
60. E2F6 E2F6 1271 1.689 - - - - 0.940 - - 0.749 -
61. daxx ENSDARG00000000729 734 1.685 - - - - - 0.957 - 0.728 - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
62. ablim1a ENSDARG00000060149 228 1.684 - - - - - 0.926 0.758 - - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
63. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.676 - - - - - 0.858 0.818 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
64. psmd6 ENSDARG00000070674 4675 1.675 - 0.964 - - - - - - 0.711 proteasome 26S subunit, non-ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1038]
65. her15.2 her15.2 1701 1.674 - - - - - 0.958 0.716 - -
66. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 1.673 - - - - - 0.808 0.865 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
67. cnrip1a ENSDARG00000091683 1491 1.672 - - - - - 0.948 0.724 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
68. KCNIP4 ENSDARG00000088100 86 1.671 - - - - - 0.933 0.738 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
69. slc38a5a ENSDARG00000009901 2527 1.671 - - - - 0.952 0.719 - - - solute carrier family 38, member 5a [Source:ZFIN;Acc:ZDB-GENE-081105-92]
70. si:ch73-21g5.7 ENSDARG00000093156 9412 1.671 - - - - - 0.941 0.730 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
71. CCDC71 CCDC71 2442 1.67 - - - - 0.952 - 0.718 - -
72. sox2 ENSDARG00000070913 2763 1.667 - - - - - 0.956 0.711 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
73. ptbp2b ENSDARG00000015901 2458 1.666 - - - - - 0.916 0.750 - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
74. rdh12 ENSDARG00000018069 396 1.665 - - - - - 0.915 0.750 - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
75. mapk12b ENSDARG00000006409 2246 1.663 - - - - - 0.933 0.730 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
76. PPFIA3 ENSDARG00000077053 310 1.662 - - - - - 0.935 0.727 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
77. nexmifb ENSDARG00000029296 416 1.66 - - - - - 0.906 0.754 - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
78. CT030046.1 CT030046.1 190 1.659 - - - - - 0.951 0.708 - -
79. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.658 - - - - - 0.951 0.707 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
80. cbln1 ENSDARG00000057296 165 1.656 - - - - - 0.938 0.718 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
81. pax3a ENSDARG00000010192 626 1.655 - - - - - 0.845 0.810 - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
82. CLIP3 ENSDARG00000054456 734 1.655 - - - - - 0.951 0.704 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
83. nxph1 ENSDARG00000033447 182 1.653 - - - - - 0.943 0.710 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
84. st6gal1 ENSDARG00000044514 142 1.652 - - - - - 0.933 0.719 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
85. MAP6 MAP6 643 1.65 - - - - - 0.907 0.743 - -
86. pspc1 ENSDARG00000006621 966 1.649 - - - - - 0.923 0.726 - - paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
87. C7H4orf48 C7H4orf48 1455 1.647 - - - - - 0.857 0.790 - -
88. dnajc6 ENSDARG00000079891 438 1.647 - - - - - 0.921 0.726 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
89. syt9a ENSDARG00000003994 298 1.646 - - - - - 0.907 - 0.739 - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
90. AL929115.2 AL929115.2 952 1.645 - - - - - 0.901 - 0.744 -
91. st18 663 1.644 - - - - - 0.907 0.737 - - suppression of tumorigenicity 18, zinc finger
92. cacna2d3 ENSDARG00000078760 211 1.643 - - - - - 0.933 0.710 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
93. st8sia5 ENSDARG00000036584 529 1.642 - - - - - 0.915 0.727 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
94. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.641 - - - - - 0.899 0.742 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
95. st8sia2 ENSDARG00000018788 2183 1.641 - - - - - 0.847 0.794 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
96. hiat1b ENSDARG00000043055 757 1.64 - - - - - 0.931 - 0.709 - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
97. stmn1b ENSDARG00000033655 9491 1.64 - - - - - 0.915 0.725 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
98. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 1.637 - - - - - 0.850 0.787 - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
99. pcsk1nl ENSDARG00000076170 1232 1.636 - - - - - 0.885 0.751 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
100. eno2 ENSDARG00000014287 2162 1.635 - - - - - 0.915 0.720 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]

There are 2326 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA