Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nfya

Gene Name Gene ID Reads Annotation
nfya ENSDARG00000042004, ENSDARG00000114231 6606 nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]










Genes with expression patterns similar to nfya

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nfya ENSDARG00000042004, ENSDARG00000114231 6606 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
2. rtca ENSDARG00000002215 3558 3.76 - 0.734 0.709 0.851 - 0.747 - 0.719 - RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
3. prmt1 ENSDARG00000010246 11311 3.036 - 0.745 0.755 - - 0.730 - 0.806 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
4. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 2.672 - 0.853 - - 0.830 - 0.989 - - DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
5. ube2e1 ENSDARG00000116649 10656 2.624 - - - - 0.889 0.783 0.952 - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
6. dusp1 ENSDARG00000100515 2338 2.486 0.938 - - 0.759 - - - - 0.789 dual specificity phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2018]
7. cdkn2aipnl ENSDARG00000053395 5107 2.486 - 0.796 0.718 - - - 0.972 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
8. carm1 ENSDARG00000018698 5599 2.481 0.941 0.739 - - - 0.801 - - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
9. snrpd1 ENSDARG00000011648 8615 2.478 - 0.744 0.769 - - - 0.965 - - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
10. crtap ENSDARG00000018010 7722 2.456 0.855 0.802 - - - - 0.799 - - cartilage associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-2619]
11. rbb4 rbb4 15541 2.446 0.891 - 0.850 - - - - 0.705 -
12. msi1 ENSDARG00000010710 2634 2.432 - - 0.713 0.893 - 0.826 - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
13. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.426 0.966 - - - - 0.754 - 0.706 - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
14. tcf12 ENSDARG00000004714 7606 2.414 - 0.773 - - - - 0.865 - 0.776 transcription factor 12 [Source:ZFIN;Acc:ZDB-GENE-040516-11]
15. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 2.397 0.957 - 0.724 - - 0.716 - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
16. nucks1a ENSDARG00000078473 28285 2.365 - - 0.788 - - 0.837 - 0.740 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
17. sf3b4 ENSDARG00000018574 7470 2.352 - - 0.721 0.824 - - 0.807 - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
18. nkain1 ENSDARG00000006859 1961 2.328 - - - 0.822 - 0.774 - 0.732 - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
19. apex1 ENSDARG00000045843 6345 2.272 - 0.761 0.708 - - - - 0.803 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
20. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.271 - - 0.738 - - 0.773 - - 0.760 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
21. snrpa ENSDARG00000018890 4593 2.258 - 0.814 0.719 - - 0.725 - - - small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
22. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.255 - - 0.724 - - 0.747 - 0.784 - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
23. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 2.242 - - 0.746 - - - - 0.772 0.724 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
24. mdkb ENSDARG00000020708 5393 2.232 - - - - - 0.706 - 0.777 0.749 midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
25. hnrpl 6412 2.225 - 0.706 0.759 - - 0.760 - - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
26. rnd3a ENSDARG00000076799 4705 2.191 - 0.758 - 0.712 - 0.721 - - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
27. ENDOD1_5 ENDOD1_5 8723 2.189 - 0.700 0.737 - - 0.752 - - -
28. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.947 0.959 - - - - - 0.988 - - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
29. fgfr3 ENSDARG00000004782, ENSDARG00000114756 1791 1.902 0.930 - - - - - 0.972 - - fibroblast growth factor receptor 3 [Source:ZFIN;Acc:ZDB-GENE-000816-1]
30. CABZ01079427.1 CABZ01079427.1 1682 1.883 0.938 - - - - - 0.945 - -
31. atl3 ENSDARG00000004270 2806 1.871 0.936 - - - - - 0.935 - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
32. krcp ENSDARG00000040224 5961 1.86 0.915 - - - - - 0.945 - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
33. zgc:63587 ENSDARG00000017140 8399 1.856 0.932 - - - - - 0.924 - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
34. fbln2 ENSDARG00000015156 1694 1.852 0.918 - - - - - 0.934 - - fibulin 2 [Source:ZFIN;Acc:ZDB-GENE-060711-1]
35. srsf5b ENSDARG00000027734 6996 1.844 0.910 - - - - - 0.934 - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
36. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.832 - - - - - 0.852 0.980 - - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
37. FAM110D FAM110D 3632 1.831 0.885 - - - - - 0.946 - -
38. nova1 ENSDARG00000020178 4129 1.803 0.962 - - - - 0.841 - - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
39. kmt2a ENSDARG00000004537 2169 1.791 - - - - - 0.818 0.973 - - lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
40. ep300b ENSDARG00000061108 5173 1.787 0.951 - - - - 0.836 - - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
41. itm2ca ENSDARG00000043448 1265 1.783 0.961 - - - - 0.822 - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
42. AL844567.1 AL844567.1 1605 1.77 - - - - - 0.786 0.984 - -
43. snrnp70 ENSDARG00000077126 5921 1.77 - - - - - - 0.983 0.787 - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
44. gigfy2 3194 1.765 - 0.823 - - - - 0.942 - - GRB10 interacting GYF protein 2, transcript variant X1
45. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.753 - 0.775 - - - - 0.978 - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
46. plxna4 ENSDARG00000019328 782 1.751 - - - - - 0.779 0.972 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
47. klc2 3058 1.746 - - - - - 0.763 0.983 - - kinesin light chain 2
48. elavl3 ENSDARG00000014420 8644 1.742 0.948 - - - - 0.794 - - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
49. tmed4 ENSDARG00000024954 3476 1.741 - - - - - - 0.959 0.782 - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
50. drap1 ENSDARG00000041203 6749 1.739 - 0.826 - - - - 0.913 - - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
51. sigmar1 ENSDARG00000011418 1240 1.738 - 0.768 - - - - 0.970 - - sigma non-opioid intracellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1006]
52. emc6 ENSDARG00000035282 4981 1.729 - 0.782 - - - - 0.947 - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
53. eftud2 ENSDARG00000012261 3081 1.724 - 0.736 - - - - 0.988 - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
54. pes ENSDARG00000018902 3286 1.724 - 0.755 - - - - 0.969 - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
55. hoxc8a ENSDARG00000070346 4252 1.72 0.930 - - - - 0.790 - - - homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
56. SNRPG ENSDARG00000099667 18697 1.719 - 0.817 - 0.902 - - - - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
57. uhrf1 ENSDARG00000103409 3282 1.718 - - - - - - 0.990 0.728 - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
58. AL929007.1 AL929007.1 3649 1.714 0.940 0.774 - - - - - - -
59. safb ENSDARG00000020467 5608 1.713 - - - - - - 0.985 0.728 - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
60. socs5a ENSDARG00000100717 6927 1.712 - 0.727 - - - - 0.985 - - suppressor of cytokine signaling 5a [Source:ZFIN;Acc:ZDB-GENE-061013-408]
61. tfam ENSDARG00000063145 4524 1.71 - 0.746 - - - - 0.964 - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
62. fbxo45 ENSDARG00000071492, ENSDARG00000111553 732 1.707 0.952 - - - - 0.755 - - - F-box protein 45 [Source:ZFIN;Acc:ZDB-GENE-040426-1450]
63. cops8 ENSDARG00000024846, ENSDARG00000115974 3053 1.706 - 0.747 - - - - 0.959 - - COP9 signalosome subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-982]
64. ckap5 ENSDARG00000102674 5068 1.704 - - - - - 0.746 0.958 - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
65. tmem194a tmem194a 745 1.704 0.949 - - 0.755 - - - - -
66. nmt1a ENSDARG00000052966 5918 1.703 - 0.758 - - - - 0.945 - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
67. si:dkey-82i20.5 ENSDARG00000116717 2965 1.699 - 0.728 - - - - 0.971 - - si:dkey-82i20.5 [Source:ZFIN;Acc:ZDB-GENE-110914-101]
68. hnrnph1l ENSDARG00000005551 8727 1.698 0.941 - - 0.757 - - - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
69. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 1.697 0.925 - - - - - - 0.772 - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
70. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.697 0.948 - - - - 0.749 - - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
71. srsf2a ENSDARG00000057484 25721 1.693 0.740 - - - - - 0.953 - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
72. mrpl27 ENSDARG00000032985 2158 1.692 - 0.736 - - - - 0.956 - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
73. sp3b ENSDARG00000007812 2928 1.692 - - - - - 0.738 0.954 - - Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
74. whsc1 1701 1.691 0.960 - - - - - - 0.731 - Wolf-Hirschhorn syndrome candidate 1
75. ptgesl ENSDARG00000068415, ENSDARG00000110236 1718 1.69 - 0.721 - - - - 0.969 - - prostaglandin E synthase 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-1063]
76. eef2a.1 ENSDARG00000042094 1781 1.686 0.952 0.734 - - - - - - - eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
77. fzd3a ENSDARG00000021664 1958 1.676 - - - 0.803 - 0.873 - - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
78. gapdhs ENSDARG00000039914 8760 1.675 - 0.764 - - 0.911 - - - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
79. si:ch211-196l7.4 ENSDARG00000095451 3766 1.673 - 0.732 - - - - 0.941 - - si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
80. DYNC1I2 DYNC1I2 4131 1.673 - 0.723 - - - - 0.950 - -
81. sptbn2 ENSDARG00000053956 8452 1.668 - 0.716 - - - - 0.952 - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
82. phgdh ENSDARG00000001873 8325 1.668 0.948 - - - - 0.720 - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
83. ryr1a ENSDARG00000011422 2377 1.663 0.947 0.716 - - - - - - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
84. celsr1a ENSDARG00000069185 1894 1.661 - - - - - - 0.939 - 0.722 cadherin EGF LAG seven-pass G-type receptor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-78]
85. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.659 - - 0.828 - - - 0.831 - - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
86. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.656 - - 0.783 - - 0.873 - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
87. sgcb ENSDARG00000052341 4168 1.655 0.925 - - - - - 0.730 - - sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
88. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 1.654 0.951 0.703 - - - - - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
89. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 1.654 0.946 - - - - 0.708 - - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
90. TUBA1A ENSDARG00000001889 25294 1.651 - - - - 0.821 0.830 - - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
91. hdac1 ENSDARG00000015427 19804 1.647 - - 0.828 - - 0.819 - - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
92. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.645 0.924 - - - - 0.721 - - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
93. ndufa6 ENSDARG00000038028 2653 1.642 - 0.707 - - - - 0.935 - - NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
94. hnrpdl 14288 1.639 0.893 - - - - - 0.746 - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
95. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.639 - 0.875 - - - 0.764 - - - KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
96. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.638 0.889 0.749 - - - - - - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
97. tob1b ENSDARG00000021372 7048 1.637 0.895 0.742 - - - - - - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
98. cltcb ENSDARG00000090716 5544 1.636 0.929 - - - - - - - 0.707 clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
99. stxbp1a ENSDARG00000001994 5154 1.633 0.864 - - - - 0.769 - - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
100. sncb ENSDARG00000104945 8197 1.63 - - - - - 0.833 - 0.797 - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]

There are 1891 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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