Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nfxl1

Gene Name Gene ID Reads Annotation
nfxl1 ENSDARG00000070127 392 nuclear transcription factor, X-box binding-like 1 [Source:ZFIN;Acc:ZDB-GENE-110411-178]










Genes with expression patterns similar to nfxl1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nfxl1 ENSDARG00000070127 392 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear transcription factor, X-box binding-like 1 [Source:ZFIN;Acc:ZDB-GENE-110411-178]
2. LPHN3 LPHN3 195 2.226 0.757 - - - - - 0.704 0.765 -
3. npr1a ENSDARG00000031751 517 1.662 - - - - - - 0.717 0.945 - natriuretic peptide receptor 1a [Source:ZFIN;Acc:ZDB-GENE-060503-539]
4. herpud2 ENSDARG00000021033 1800 1.611 - 0.722 - - - - - 0.889 - HERPUD family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-868]
5. igsf9b ENSDARG00000010408 786 1.61 0.784 - - - - 0.826 - - - immunoglobulin superfamily, member 9b [Source:ZFIN;Acc:ZDB-GENE-060810-28]
6. trabd ENSDARG00000010445 195 1.6 - - - - - - 0.824 0.776 - TraB domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-1301]
7. nop58 ENSDARG00000104353 8497 1.59 - - - - - - 0.810 0.780 - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
8. rbm27 ENSDARG00000060521 185 1.558 - 0.789 - - - - - 0.769 - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
9. aacs ENSDARG00000012468 1138 1.555 - - - 0.702 - - - 0.853 - acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
10. C17H14orf159 128 1.548 - - 0.765 - - - 0.783 - - c17h14orf159 homolog (H. sapiens)
11. si:dkey-10g2.5 si:dkey-10g2.5 72 1.543 0.765 - - - - - - 0.778 -
12. pld1b ENSDARG00000057125 325 1.54 0.722 - - 0.818 - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
13. mcat ENSDARG00000016613, ENSDARG00000096473 140 1.532 0.771 - - 0.761 - - - - - malonyl CoA:ACP acyltransferase (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-041111-231]
14. oip5 ENSDARG00000093597 329 1.525 - - 0.712 - - - 0.813 - - opa interacting protein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-328]
15. spata2l ENSDARG00000068814 152 1.506 - - - - - - 0.763 0.743 - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
16. hmgcs1 ENSDARG00000103025 231 1.5 0.777 - - - - - - 0.723 - 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1042]
17. kcnh6 kcnh6 59 1.494 - - 0.777 0.717 - - - - -
18. reep3l reep3l 608 1.489 0.758 - - - - - 0.731 - -
19. fance ENSDARG00000068870 155 1.479 - - - - - 0.734 - 0.745 - FA complementation group E [Source:ZFIN;Acc:ZDB-GENE-060510-5]
20. plekhj1 ENSDARG00000025593 696 1.471 - 0.715 - - - - 0.756 - - pleckstrin homology domain containing, family J member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2480]
21. adnpb ENSDARG00000074293 796 1.463 - 0.728 - - - - 0.735 - - activity-dependent neuroprotector homeobox b [Source:ZFIN;Acc:ZDB-GENE-030131-6385]
22. wdr75 ENSDARG00000040730 1247 1.462 - - - 0.718 - - 0.744 - - WD repeat domain 75 [Source:ZFIN;Acc:ZDB-GENE-030616-5]
23. nol6 ENSDARG00000059711, ENSDARG00000115621 853 1.461 - - - - - - 0.732 0.729 - nucleolar protein 6 (RNA-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-6294]
24. si:dkey-256h2.1 ENSDARG00000021849 38 1.453 - - 0.703 - - - 0.750 - - si:dkey-256h2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9466]
25. zgc:112980 ENSDARG00000037739, ENSDARG00000114118 552 1.444 - - - - - - 0.730 0.714 - zgc:112980 [Source:ZFIN;Acc:ZDB-GENE-050306-1]
26. pcdh17 ENSDARG00000027041 260 1.44 0.727 - - 0.713 - - - - - protocadherin 17 [Source:ZFIN;Acc:ZDB-GENE-090608-3]
27. CR387996.2 CR387996.2 1272 1.435 - 0.712 - - - - 0.723 - -
28. rpap1 ENSDARG00000075072, ENSDARG00000117161 250 1.427 0.704 - - 0.723 - - - - - RNA polymerase II associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-090914-1]
29. si:ch211-194e15.5 ENSDARG00000061804 253 0.972 - - - - - - - 0.972 - si:ch211-194e15.5 [Source:ZFIN;Acc:ZDB-GENE-060503-393]
30. dnajb6b ENSDARG00000020953, ENSDARG00000110048 446 0.966 - - - - - - - 0.966 - DnaJ (Hsp40) homolog, subfamily B, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-1122]
31. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 0.956 - - - - - - - 0.956 - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
32. ptprt ENSDARG00000074781, ENSDARG00000097572 434 0.925 - - - - - - 0.925 - - protein tyrosine phosphatase, receptor type, t [Source:ZFIN;Acc:ZDB-GENE-101028-4]
33. mapre1a ENSDARG00000042927 164 0.923 0.923 - - - - - - - - microtubule-associated protein, RP/EB family, member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6067]
34. si:dkey-235d18.5 ENSDARG00000039652 667 0.914 - - - - - - - 0.914 - si:dkey-235d18.5 [Source:ZFIN;Acc:ZDB-GENE-041014-243]
35. blzf1 ENSDARG00000011299 2568 0.909 - - - - - - - 0.909 - basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
36. CR847496.2 ENSDARG00000116070 802 0.908 - - - - - - - 0.908 - platelet derived growth factor c [Source:NCBI gene;Acc:560564]
37. gcshb ENSDARG00000105187 182 0.906 - - - - - - 0.906 - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
38. ift46 ENSDARG00000011240 2499 0.896 - - - - - - 0.896 - - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
39. hoxb5a ENSDARG00000013057 735 0.896 0.896 - - - - - - - - homeobox B5a [Source:ZFIN;Acc:ZDB-GENE-980526-70]
40. ppm1k ENSDARG00000010655 1285 0.895 - - - - - - - 0.895 - protein phosphatase, Mg2+/Mn2+ dependent, 1K [Source:ZFIN;Acc:ZDB-GENE-050306-8]
41. BAX BAX 1673 0.891 - - - - - - - 0.891 -
42. TSPAN4 TSPAN4 941 0.888 - - - - - - - 0.888 -
43. si:ch211-238e22.1 si:ch211-238e22.1 1032 0.886 - - - - - - 0.886 - -
44. si:ch211-269i23.2 432 0.881 - - - - - - - 0.881 - si:ch211-269i23.2, transcript variant X3
45. rprd2a ENSDARG00000058089 743 0.881 0.881 - - - - - - - - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
46. nol11 ENSDARG00000026767 2528 0.875 - - - - - - 0.875 - - nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
47. si:ch211-152p11.4 ENSDARG00000079705 2341 0.874 0.874 - - - - - - - - si:ch211-152p11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-764]
48. sh3bgrl3 ENSDARG00000098075 3071 0.873 - - - - - - - 0.873 - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
49. mkrn4 ENSDARG00000028295 2768 0.873 - - - - - - - 0.873 - makorin, ring finger protein, 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5954]
50. si:dkey-202b22.6 ENSDARG00000045552 190 0.873 - - - - - - 0.873 - - si:dkey-202b22.6 [Source:ZFIN;Acc:ZDB-GENE-041210-176]
51. C9H2orf69 C9H2orf69 148 0.87 - - 0.870 - - - - - -
52. slc26a11 ENSDARG00000043021 157 0.868 0.868 - - - - - - - - solute carrier family 26 (anion exchanger), member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5349]
53. dio3a 19 0.868 - - 0.868 - - - - - - deiodinase, iodothyronine, type IIIa
54. sub1b ENSDARG00000007720, ENSDARG00000112010 2258 0.868 - - - - - - 0.868 - - SUB1 homolog, transcriptional regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-209]
55. ZNF135 ZNF135 14 0.867 - - 0.867 - - - - - -
56. PEG3_5 PEG3_5 1624 0.866 - - - - - - - 0.866 -
57. ddx11 ENSDARG00000011072 325 0.866 - - - - - 0.866 - - - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Source:ZFIN;Acc:ZDB-GENE-041114-191]
58. rbm25 rbm25 3629 0.864 - - - - - - 0.864 - -
59. PEX5L PEX5L 179 0.864 - - 0.864 - - - - - -
60. CABZ01076758.1 ENSDARG00000100810 3 0.863 - - 0.863 - - - - - -
61. tchp ENSDARG00000035605 1695 0.863 - - - - - - 0.863 - - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
62. EMP3 EMP3 523 0.862 - - - - - - - 0.862 -
63. C24H3orf58 C24H3orf58 99 0.861 - - 0.861 - - - - - -
64. SLCO5A1 SLCO5A1 6 0.86 - - 0.860 - - - - - -
65. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 0.86 0.860 - - - - - - - - ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
66. si:dkey-27h10.2 ENSDARG00000094485 3 0.859 - - 0.859 - - - - - - si:dkey-27h10.2 [Source:ZFIN;Acc:ZDB-GENE-090313-296]
67. kif23 ENSDARG00000014943, ENSDARG00000116561 845 0.859 - - - - - - 0.859 - - kinesin family member 23 [Source:ZFIN;Acc:ZDB-GENE-991019-4]
68. shcbp1 ENSDARG00000102068, ENSDARG00000113939 423 0.858 0.858 - - - - - - - - SHC SH2-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5865]
69. ngdn ENSDARG00000045372 782 0.857 - - - - - - 0.857 - - neuroguidin, EIF4E binding protein [Source:ZFIN;Acc:ZDB-GENE-031030-13]
70. cry1b cry1b 152 0.856 - - - - - - 0.856 - -
71. c6ast1 ENSDARG00000069216 8 0.856 - - 0.856 - - - - - - six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
72. MBTD1 ENSDARG00000060868 783 0.855 0.855 - - - - - - - - mbt domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-138]
73. C2H1orf35 C2H1orf35 652 0.855 0.855 - - - - - - - -
74. nxnl2 ENSDARG00000003934 386 0.855 0.855 - - - - - - - - nucleoredoxin like 2 [Source:ZFIN;Acc:ZDB-GENE-041212-55]
75. tpbgl ENSDARG00000114338 5 0.855 - - 0.855 - - - - - - trophoblast glycoprotein-like [Source:ZFIN;Acc:ZDB-GENE-120209-2]
76. si:dkeyp-110e4.3 si:dkeyp-110e4.3 2 0.855 - - 0.855 - - - - - -
77. si:dkey-4c15.19 si:dkey-4c15.19 219 0.855 - - 0.855 - - - - - -
78. si:ch211-214b16.3 ENSDARG00000089079 8 0.855 - - 0.855 - - - - - - si:ch211-214b16.3 [Source:ZFIN;Acc:ZDB-GENE-081105-50]
79. CU658147.2 CU658147.2 2 0.855 - - 0.855 - - - - - -
80. si:dkey-79c1.1 ENSDARG00000093179 11 0.855 - - 0.855 - - - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
81. fth1b ENSDARG00000007975 96 0.855 - - - - - - 0.855 - - ferritin, heavy polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040912-30]
82. dcp2_1 ENSDARG00000104242 74 0.854 - - - - - - 0.854 - - decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
83. trnau1apa ENSDARG00000101323 911 0.854 - - - - - - 0.854 - - tRNA selenocysteine 1 associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-502]
84. pkn2 ENSDARG00000101983 1211 0.854 - - - - - - - 0.854 - protein kinase N2 [Source:ZFIN;Acc:ZDB-GENE-061207-42]
85. pacrg ENSDARG00000087556 25 0.852 - - 0.852 - - - - - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
86. kdsr ENSDARG00000012021 1560 0.852 - - - - - - - 0.852 - 3-ketodihydrosphingosine reductase [Source:ZFIN;Acc:ZDB-GENE-040426-853]
87. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 0.852 - - - - - - 0.852 - - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
88. si:ch211-218d20.10 si:ch211-218d20.10 4 0.852 - - 0.852 - - - - - -
89. dhdhl ENSDARG00000028336 844 0.851 0.851 - - - - - - - - dihydrodiol dehydrogenase (dimeric), like [Source:ZFIN;Acc:ZDB-GENE-040426-2180]
90. C17H10orf137 C17H10orf137 273 0.851 - 0.851 - - - - - - -
91. srcap ENSDARG00000005236 1740 0.85 - - - - - - - 0.850 - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
92. zgc:113298 ENSDARG00000071648 3 0.847 - - 0.847 - - - - - - zgc:113298 [Source:ZFIN;Acc:ZDB-GENE-050522-40]
93. usp6nl ENSDARG00000022187, ENSDARG00000109772 432 0.844 - - - - - - 0.844 - - USP6 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041210-192]
94. stk25b ENSDARG00000039022 268 0.843 - - - - - - 0.843 - - serine/threonine kinase 25b [Source:ZFIN;Acc:ZDB-GENE-040426-2537]
95. PLA2G4C_2 PLA2G4C_2 10 0.842 - - 0.842 - - - - - -
96. P2RY13 ENSDARG00000069944 11 0.842 - - 0.842 - - - - - - purinergic receptor P2Y13 [Source:ZFIN;Acc:ZDB-GENE-110208-5]
97. CHST8 23 0.841 - - 0.841 - - - - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8, transcript variant X1
98. smfn ENSDARG00000009806 1280 0.84 - - - - - - 0.840 - - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
99. rxfp2b ENSDARG00000019660 464 0.84 - - - - - - 0.840 - - relaxin family peptide receptor 2b [Source:ZFIN;Acc:ZDB-GENE-110408-27]
100. kmt2ba ENSDARG00000062962 1572 0.84 - - - - - - 0.840 - - lysine (K)-specific methyltransferase 2Ba [Source:ZFIN;Acc:ZDB-GENE-060503-376]

There are 937 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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