Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nfixa

Gene Name Gene ID Reads Annotation
nfixa ENSDARG00000043226 14 nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]










Genes with expression patterns similar to nfixa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nfixa ENSDARG00000043226 14 6 - 1.000 - 1.000 1.000 1.000 - 1.000 1.000 nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
2. si:ch211-38m6.6 ENSDARG00000076959 12 2.641 - 1.000 - 0.764 - 0.877 - - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
3. zgc:173713 17 2 - 1.000 - 1.000 - - - - - zgc:173713, transcript variant X2
4. gltpb ENSDARG00000077962 5 2 - 1.000 - 1.000 - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
5. si:ch211-262n1.5 12 2 - - - 1.000 1.000 - - - - si:ch211-262n1.5
6. ttc6 ENSDARG00000104125 7 2 - 1.000 - 1.000 - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
7. si:dkey-200l5.4 ENSDARG00000095294 13 2 - 1.000 - - - 1.000 - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
8. si:dkey-119g10.4 si:dkey-119g10.4 7 2 - 1.000 - 1.000 - - - - -
9. EP400 ENSDARG00000100965 45 2 - - - 1.000 - 1.000 - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
10. si:dkey-9a20.8 si:dkey-9a20.8 8 2 - - - 1.000 1.000 - - - -
11. si:dkey-265e15.5 ENSDARG00000103229 6 2 - - - 1.000 1.000 - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
12. arl11l arl11l 31 2 - 1.000 - 1.000 - - - - -
13. samsn1b ENSDARG00000078647 8 2 - - - - 1.000 1.000 - - - SAM domain, SH3 domain and nuclear localisation signals 1b [Source:ZFIN;Acc:ZDB-GENE-041010-135]
14. zgc:153116 ENSDARG00000077205 7 2 - - - 1.000 1.000 - - - - zgc:153116 [Source:ZFIN;Acc:ZDB-GENE-060825-107]
15. GRIK2 ENSDARG00000113771 3 1.965 - - - 1.000 0.965 - - - - glutamate ionotropic receptor kainate type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4580]
16. NPPC ENSDARG00000068126 45 1.961 - 1.000 - - - 0.961 - - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
17. gper gper 4 1.951 - - - 1.000 0.951 - - - -
18. gfra3 ENSDARG00000087704 122 1.91 - 1.000 - - - 0.910 - - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
19. trim46b ENSDARG00000058649 54 1.877 - 1.000 - - - 0.877 - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
20. lrmp ENSDARG00000045574 26 1.875 - 0.907 - - - 0.968 - - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
21. ccbl2 4 1.836 - - - - 1.000 - - - 0.836 cysteine conjugate-beta lyase 2, transcript variant X4
22. EXT1_1 EXT1_1 3 1.836 - - - 1.000 - - - - 0.836
23. pip4k2ab ENSDARG00000063544 1 1.836 - - - - 1.000 - - - 0.836 phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b [Source:ZFIN;Acc:ZDB-GENE-070912-272]
24. CABZ01088933.1 CABZ01088933.1 40 1.827 - 1.000 - - 0.827 - - - -
25. neurod2 ENSDARG00000016854 6 1.81 - - - 1.000 - - - 0.810 - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
26. or125-4 ENSDARG00000095417 2 1.808 - - - - 1.000 - - 0.808 - odorant receptor, family E, subfamily 125, member 4 [Source:ZFIN;Acc:ZDB-GENE-070806-94]
27. or115-1 ENSDARG00000018521 1 1.808 - - - 1.000 - - - 0.808 - odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
28. BRSK2_2 BRSK2_2 3 1.808 - - - 1.000 - - - 0.808 -
29. si:dkey-228c11.4 si:dkey-228c11.4 5 1.808 - - - 1.000 - - - 0.808 -
30. BX119910.13 BX119910.13 4 1.777 - 1.000 - - 0.777 - - - -
31. ompb ENSDARG00000032380, ENSDARG00000115093 12 1.773 - - - - 1.000 - - 0.773 - olfactory marker protein b [Source:ZFIN;Acc:ZDB-GENE-030103-1]
32. si:ch73-92e20.2 si:ch73-92e20.2 2 1.768 - - - - 1.000 - - - 0.768
33. si:dkey-43b14.8 35 1.767 - 1.000 - - 0.767 - - - - si:dkey-43b14.8
34. RIMS1 RIMS1 9 1.743 - 1.000 - 0.743 - - - - -
35. si:dkey-286j17.4 ENSDARG00000093402 1 1.704 - 0.704 - - - 1.000 - - - si:dkey-286j17.4 [Source:ZFIN;Acc:ZDB-GENE-130530-2]
36. spata20 ENSDARG00000013880 46 1.702 - 1.000 - - - 0.702 - - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
37. klf5b ENSDARG00000062106 7 1.702 - 1.000 - - - 0.702 - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
38. CABZ01032454.1 CABZ01032454.1 7 1.692 - 0.815 - - - 0.877 - - -
39. neurod neurod 1189 1.588 - 0.816 - - - 0.772 - - -
40. CDH7 16 1.581 - 0.704 - - - 0.877 - - - cadherin 7, type 2, transcript variant X1
41. rtn4rl2a ENSDARG00000052012 5 1.539 - - - - - - - 0.716 0.823 reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
42. CABZ01071530.2 CABZ01071530.2 47 1.534 - 0.704 - - - 0.830 - - -
43. lef1 ENSDARG00000031894 492 1.512 - 0.797 - - - - - 0.715 - lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
44. hn1a hn1a 115 1.463 - 0.762 - - - 0.701 - - -
45. chd5 ENSDARG00000105083 132 1.449 - 0.704 - - - - - - 0.745 chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
46. vrtn ENSDARG00000061963, ENSDARG00000115943 42 1 - 1.000 - - - - - - - vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
47. BEGAIN BEGAIN 39 1 - - - - - 1.000 - - -
48. C18H15orf59 C18H15orf59 80 1 - 1.000 - - - - - - -
49. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
50. LRRC61 ENSDARG00000077357 55 1 - - - - - 1.000 - - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
51. si:dkey-57l19.1 ENSDARG00000098143 1 1 - 1.000 - - - - - - - si:dkey-57l19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-171]
52. cx36.7 ENSDARG00000017927 1 1 - - - - 1.000 - - - - connexin 36.7 [Source:ZFIN;Acc:ZDB-GENE-050616-5]
53. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - 1.000 - - - - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
54. grk7a ENSDARG00000020602 10 1 - - - - 1.000 - - - - G protein-coupled receptor kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050824-1]
55. casp6 ENSDARG00000093405, ENSDARG00000115863 11 1 - 1.000 - - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
56. CU928213.1 CU928213.1 0 1 - - - - 1.000 - - - -
57. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 1 - - - 1.000 - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
58. si:ch211-229l10.10 si:ch211-229l10.10 8 1 - - - 1.000 - - - - -
59. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - 1.000 - - - - - - -
60. SLC16A7 ENSDARG00000098258 4 1 - - - 1.000 - - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
61. si:dkey-165b20.3 ENSDARG00000099544 6 1 - - - 1.000 - - - - - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
62. si:dkey-25o1.2 si:dkey-25o1.2 86 1 - - - 1.000 - - - - -
63. rhoga ENSDARG00000068653 13 1 - - - - - 1.000 - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
64. zgc:174680 ENSDARG00000100702 3 1 - - - - - 1.000 - - - zgc:174680 [Source:ZFIN;Acc:ZDB-GENE-080204-24]
65. slc17a6a ENSDARG00000001127 337 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
66. cdh23 ENSDARG00000007561, ENSDARG00000094454 3 1 - - - 1.000 - - - - - cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]
67. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1 - 1.000 - - - - - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
68. ccnd3 ENSDARG00000027391 1 1 - - - - 1.000 - - - - cyclin D3 [Source:ZFIN;Acc:ZDB-GENE-041010-110]
69. ptf1a ENSDARG00000014479 349 1 - 1.000 - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
70. baiap2l1b ENSDARG00000031119 71 1 - 1.000 - - - - - - - BAI1-associated protein 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-050417-371]
71. si:ch211-133l5.8 ENSDARG00000027676 23 1 - - - 1.000 - - - - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
72. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - - - 1.000 - - - - -
73. alkbh7 ENSDARG00000037906 9 1 - - - - 1.000 - - - - alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
74. KIAA0319 KIAA0319 2 1 - - - - - 1.000 - - -
75. tusc3 ENSDARG00000078854 4 1 - - - 1.000 - - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
76. calb1 ENSDARG00000031598 252 1 - 1.000 - - - - - - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
77. si:dkey-43k4.4 si:dkey-43k4.4 4 1 - - - - 1.000 - - - -
78. CABZ01012890.1 CABZ01012890.1 0 1 - - - - 1.000 - - - -
79. si:ch211-106h4.12 ENSDARG00000092920 6 1 - - - 1.000 - - - - - si:ch211-106h4.12 [Source:ZFIN;Acc:ZDB-GENE-070705-12]
80. zgc:195195 zgc:195195 6 1 - 1.000 - - - - - - -
81. cobl ENSDARG00000091006 4 1 - 1.000 - - - - - - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
82. C6H3orf67 C6H3orf67 1 1 - 1.000 - - - - - - -
83. gngt2b ENSDARG00000103543 132 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
84. si:ch211-175f12.2 ENSDARG00000095831 1 1 - - - - 1.000 - - - - si:ch211-175f12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-220]
85. AL954173.3 AL954173.3 1 1 - - - 1.000 - - - - -
86. PLCG2 ENSDARG00000068763 11 1 - - - 1.000 - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
87. foxq1a ENSDARG00000030896 121 1 - 1.000 - - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
88. cd4 cd4 4 1 - - - 1.000 - - - - -
89. ciita ENSDARG00000090851 5 1 - - - - - 1.000 - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
90. si:dkey-265e15.2 ENSDARG00000089582, ENSDARG00000113391 1 1 - - - - - 1.000 - - - si:dkey-265e15.2 [Source:ZFIN;Acc:ZDB-GENE-081103-3]
91. si:ch211-198c19.1 ENSDARG00000089333 3 1 - 1.000 - - - - - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
92. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
93. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 - - - - - 1.000 - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
94. SOX8 SOX8 22 1 - - - - - 1.000 - - -
95. TRPC4_1 TRPC4_1 212 1 - 1.000 - - - - - - -
96. si:ch211-141e20.2 ENSDARG00000093349 61 1 - 1.000 - - - - - - - si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]
97. SNORA81_1 SNORA81_1 8 1 - 1.000 - - - - - - -
98. CABZ01081674.1 CABZ01081674.1 15 1 - - - - 1.000 - - - -
99. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - 1.000 - - - - - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
100. si:dkeyp-80d11.12 ENSDARG00000101728 4 1 - - - - 1.000 - - - - si:dkeyp-80d11.12 [Source:ZFIN;Acc:ZDB-GENE-070424-273]

There are 1043 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA