Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nfil3-5

Gene Name Gene ID Reads Annotation
nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]










Genes with expression patterns similar to nfil3-5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
2. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 2.553 - 0.753 - - - 0.805 0.995 - - GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
3. tgif1 ENSDARG00000059337 4020 2.256 - - 0.728 0.714 - - - - 0.814 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
4. si:dkey-13i19.8 ENSDARG00000093058 4617 1.852 - - - - - 0.873 0.979 - - si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
5. hnrnpm ENSDARG00000061735 19428 1.814 - - - - - - 0.975 - 0.839 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
6. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 1.781 - - - - - - 0.990 - 0.791 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
7. SH3BGRL ENSDARG00000058302 4525 1.767 - - - - - 0.769 0.998 - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
8. scg3 ENSDARG00000086288, ENSDARG00000115955 1587 1.765 - - - - - 0.767 0.998 - - secretogranin III [Source:ZFIN;Acc:ZDB-GENE-040426-1725]
9. h1fx ENSDARG00000054058 4075 1.75 - - - - - 0.753 0.997 - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
10. cdh1 ENSDARG00000102750 8654 1.746 - 0.770 - - - - 0.976 - - cadherin 1, type 1, E-cadherin (epithelial) [Source:ZFIN;Acc:ZDB-GENE-010606-1]
11. shmt1 ENSDARG00000052816 5463 1.743 - - - - - - 0.983 0.760 - serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]
12. TNRC6C_1 TNRC6C_1 6574 1.734 - - - 0.737 - - 0.997 - -
13. zbtb18 ENSDARG00000028228 3653 1.728 - - - - - - 0.997 - 0.731 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
14. med6 ENSDARG00000034734 2711 1.703 - - - - - 0.705 0.998 - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
15. fuca1 fuca1 6176 1.701 - - - - - 0.713 0.988 - -
16. igfbp1a ENSDARG00000099351 1717 1.7 - - - - - - 0.997 0.703 - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
17. si:ch73-110p20.1 5932 1.698 - - - - - 0.701 0.997 - - si:ch73-110p20.1
18. ctnnb1 ENSDARG00000014571 12004 1.696 - - 0.702 - - - 0.994 - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
19. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 1.588 - - - - - - - 0.746 0.842 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
20. tom1 ENSDARG00000104581 1457 1.584 - - - - - 0.801 - 0.783 - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
21. lin52 ENSDARG00000070833 2271 1.581 - - - - - 0.854 - - 0.727 lin-52 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-061110-82]
22. knop1 ENSDARG00000077721 2198 1.579 - - 0.712 - - 0.867 - - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
23. hectd1 ENSDARG00000054213 3501 1.57 - 0.705 - - - 0.865 - - - HECT domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030616-153]
24. rbb4 rbb4 15541 1.55 - - 0.778 - - - - - 0.772
25. vezf1a ENSDARG00000008247 1449 1.545 - - - 0.804 - - - - 0.741 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
26. CR936437.1 CR936437.1 6465 1.545 - - - 0.775 - - - - 0.770
27. tmpob ENSDARG00000022978 8121 1.542 - - 0.769 - - - - - 0.773 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
28. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 1.541 - - - - - 0.790 - 0.751 - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
29. C6H2orf40 C6H2orf40 4224 1.535 - 0.709 - - - 0.826 - - -
30. sec11a ENSDARG00000008936, ENSDARG00000116303 6529 1.533 - 0.754 - - - 0.779 - - - SEC11 homolog A, signal peptidase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040718-227]
31. bcar1 ENSDARG00000056525 6563 1.518 - - - - - 0.807 - 0.711 - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
32. smg7 ENSDARG00000060767 2759 1.518 - - - 0.703 - 0.815 - - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
33. tmed4 ENSDARG00000024954 3476 1.515 - 0.759 - - - 0.756 - - - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
34. sumo3a ENSDARG00000028119 13447 1.514 - - - 0.725 - - - - 0.789 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
35. dvl2 ENSDARG00000056184 1525 1.512 - - - 0.725 - 0.787 - - - dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
36. sox2 ENSDARG00000070913 2763 1.512 - - 0.721 0.791 - - - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
37. GATAD2B ENSDARG00000005834 3855 1.498 - - - 0.726 - - - - 0.772 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
38. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.496 - - - 0.704 - - - - 0.792 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
39. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.493 - - 0.719 - - - - - 0.774 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
40. HOOK3 ENSDARG00000114329 1980 1.492 - 0.741 - - - 0.751 - - - hook microtubule tethering protein 3 [Source:HGNC Symbol;Acc:HGNC:23576]
41. slbp ENSDARG00000100558 3405 1.492 - - - 0.711 - - - - 0.781 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
42. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.489 - - - 0.750 - - - - 0.739 cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
43. safb ENSDARG00000020467 5608 1.483 - - - - - 0.766 - - 0.717 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
44. SSBP4 ENSDARG00000056483 5156 1.48 - - 0.719 - - - - 0.761 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
45. uhrf1 ENSDARG00000103409 3282 1.48 - - - 0.777 - - - - 0.703 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
46. mxd3 ENSDARG00000098350 3040 1.476 - - - - - 0.764 - - 0.712 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
47. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.474 - - - - - 0.701 - - 0.773 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
48. bc2 5213 1.473 - 0.760 - - - 0.713 - - - putative breast adenocarcinoma marker
49. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.472 - - - - - 0.718 - - 0.754 CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
50. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.471 - 0.714 - - - - - - 0.757 high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
51. snrpd3l ENSDARG00000076283 7655 1.47 - - - 0.705 - - - - 0.765 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
52. esco2 ENSDARG00000014685 1971 1.465 - - - 0.724 - - - - 0.741 establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-156]
53. sumo3b ENSDARG00000035993 3414 1.459 - - 0.753 0.706 - - - - - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
54. h2afva ENSDARG00000068820 16427 1.457 - - - 0.738 - - - - 0.719 H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
55. pias2 ENSDARG00000092979, ENSDARG00000115060 2317 1.451 - - - - - 0.749 - - 0.702 protein inhibitor of activated STAT, 2 [Source:ZFIN;Acc:ZDB-GENE-060424-1]
56. morc2 ENSDARG00000028539 3259 1.447 - - 0.724 0.723 - - - - - MORC family CW-type zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-040822-40]
57. lmnb2 ENSDARG00000101624 11304 1.446 - - - 0.727 - - - - 0.719 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
58. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.443 - - - - - - - 0.721 0.722 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
59. CLSPN 2054 1.44 - - 0.720 0.720 - - - - - claspin
60. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.439 - - - 0.729 - 0.710 - - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
61. rhogd ENSDARG00000030608, ENSDARG00000112157 599 1.435 0.705 - - - - 0.730 - - - ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
62. dusp7 ENSDARG00000101413 1307 1.435 - - - - - 0.717 - 0.718 - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
63. ezh2 ENSDARG00000010571 3273 1.431 - - - 0.714 - - - - 0.717 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
64. zgc:163030 ENSDARG00000069192 2963 1.431 - 0.730 - - - 0.701 - - - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
65. bcl11ab ENSDARG00000063153 3032 1.429 - - - 0.700 - - - - 0.729 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
66. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.428 - - - 0.702 - - - - 0.726 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
67. e2f8 ENSDARG00000057323 1432 1.427 - - 0.719 0.708 - - - - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
68. CT955967.1 ENSDARG00000099956 2885 1.415 - - - 0.702 - - - - 0.713
69. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 0.999 - - - - - - 0.999 - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
70. CABZ01075242.1_1 ENSDARG00000114227 1012 0.998 - - - - - - 0.998 - -
71. adssl ENSDARG00000012399 2271 0.998 - - - - - - 0.998 - - adenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
72. ctdsp1 ENSDARG00000040674 2828 0.998 - - - - - - 0.998 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
73. CAMK2G CAMK2G 3537 0.998 - - - - - - 0.998 - -
74. si:dkey-256i11.1 si:dkey-256i11.1 3373 0.998 - - - - - - 0.998 - -
75. galnt11 ENSDARG00000063636 1188 0.998 - - - - - - 0.998 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [Source:ZFIN;Acc:ZDB-GENE-060929-998]
76. TNRC18 ENSDARG00000077052 1095 0.998 - - - - - - 0.998 - - trinucleotide repeat containing 18 [Source:ZFIN;Acc:ZDB-GENE-100326-1]
77. arrdc3a ENSDARG00000052690 2280 0.998 - - - - - - 0.998 - - arrestin domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2913]
78. degs1 ENSDARG00000007347 2481 0.998 - - - - - - 0.998 - - delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
79. arf6b ENSDARG00000052928 4585 0.998 - - - - - - 0.998 - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
80. mfhas1 ENSDARG00000079104, ENSDARG00000115162 921 0.998 - - - - - - 0.998 - - malignant fibrous histiocytoma amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-080917-20]
81. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 0.998 - - - - - - 0.998 - - slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
82. zranb2 ENSDARG00000044332 6723 0.998 - - - - - - 0.998 - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
83. etv5a ENSDARG00000069763, ENSDARG00000112509, ENSDARG00000113729 1954 0.998 - - - - - - 0.998 - - ets variant 5a [Source:ZFIN;Acc:ZDB-GENE-030131-9572]
84. xpo4 ENSDARG00000010281, ENSDARG00000109463 2010 0.998 - - - - - - 0.998 - - exportin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3062]
85. echdc2 ENSDARG00000016607 719 0.998 - - - - - - 0.998 - - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
86. rbms1a ENSDARG00000074023 2742 0.998 - - - - - - 0.998 - - RNA binding motif, single stranded interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4967]
87. ARHGAP35 2409 0.998 - - - - - - 0.998 - - Rho GTPase activating protein 35b, transcript variant X2
88. mtmr14 ENSDARG00000059642 1405 0.998 - - - - - - 0.998 - - myotubularin related protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2649]
89. mapre1b ENSDARG00000002659 9119 0.998 - - - - - - 0.998 - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
90. ZNF462 ENSDARG00000112909 1132 0.998 - - - - - - 0.998 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
91. vipr2 ENSDARG00000012353, ENSDARG00000111580, ENSDARG00000115849 485 0.998 - - - - - - 0.998 - - vasoactive intestinal peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-010406-4]
92. fbl ENSDARG00000053912 5891 0.998 - - - - - - 0.998 - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
93. TUBB8P7 TUBB8P7 1353 0.997 - - - - - - 0.997 - -
94. prkag1 ENSDARG00000003818 2800 0.997 - - - - - - 0.997 - - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2188]
95. SLC29A4 ENSDARG00000059690 470 0.997 - - - - - - 0.997 - - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
96. GPANK1 ENSDARG00000053995 1535 0.997 - - - - - - 0.997 - - G patch domain and ankyrin repeats 1 [Source:ZFIN;Acc:ZDB-GENE-070928-32]
97. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 0.997 - - - - - - 0.997 - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
98. USP31 ENSDARG00000074017 628 0.997 - - - - - - 0.997 - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
99. C20H2orf44 C20H2orf44 486 0.997 - - - - - - 0.997 - -
100. CU457815.1 ENSDARG00000115823 1005 0.997 - - - - - - 0.997 - - ankyrin repeat and SOCS box containing 15a [Source:NCBI gene;Acc:100151067]

There are 1065 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA